Gymnogyps californianus (California condor): 127023441
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Entry
127023441 CDS
T08687
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gcl03041
]
127023441
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127023441
Spliceosome [BR:
gcl03041
]
Complex C
Other components
Complex C specific factors
127023441
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
Cas3-like_C_2
AAA_7
UPF0203
Motif
Other DBs
NCBI-GeneID:
127023441
NCBI-ProteinID:
XP_050763513
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All DBs
Position
17:4682437..4715343
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AA seq
712 aa
AA seq
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MAAPVGPVKFWKPGTEGPGVSVSEERQSPAESSGITVIYNPYASLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
ADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEG
RTFPVDVFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARA
LSRTGMKKHLRVLPMYAGLPSPDQMKVFERVSHSVRKVIVATNIAETSITIHGIAFVIDC
GFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPKSTVP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFVIPPNQKAQAARQHRKFAV
EEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQ
TAKYYMRDVTAVESAWLLELAPHFYQQGTVRNQHKAQTHLSLKAKRVKVDDH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgggaccggtgaagttttggaagcctggcacggaaggtcctggtgtc
agtgtctcagaggagagacagagtcccgctgagagtagcggcataaccgtcatctataat
ccttatgcttccctttctattgaacaacagagacaaaagctgcctgtttttaagctaaga
aatcacatactttatctagtggagaactatcagactctggtgattgttggggaaacaggt
tgtgggaaatcaacacagattccacaatacctagcagaagctggctggacagctgaagga
agagttgttggagtgacgcagcctcgtcgggttgctgctgtttcagttgcaggccgagtt
gctgatgaaagaggtgcagtgttggggcatgaagttggatattgtattcggtttgatgac
tgcacggatccacaggctacaagaattaagtttctcaccgatggtatgctggtgagggag
atgatggctgatcctttattaacaagatacagtgtcctcatgctggatgaagcccatgaa
aggactctttatacagatattgccattggcttactaaaaaaggttcaaaagaagcgtggg
gatcttcgactgattgtggcttcagccaccttggatgcagagaaattcagggatttcttt
aatcaaaatgatactggtgaccccagcaaagataccagtgtgatccttactgtcgagggg
agaacgtttccagtggacgtcttttacatacagagtcctgttccagactatataaaatca
actgtggaaactgcaatgaaaattcaccagatggagaatgatggtgatatattggcattt
ttaactggccaggaggaagtggagactgttgtttctatgctcatagagcaggctcgggcc
ctttctcgcactggaatgaaaaagcacctccgtgttctccccatgtatgctgggctgcct
tctcctgatcaaatgaaagtgtttgagagagtttctcacagtgtcaggaaggtgatagta
gccaccaacattgctgagacctccatcacaattcacggaattgcattcgtaattgattgt
ggttttgtgaagcttcgggcctataaccccaaaacagccatcgaatgccttgtggtggta
ccagtatctaaagcttcagctaatcagagagcagggcgtgctggacggaaccgctctgga
aaatgttacagactttatacagaggaggacttcgagaagctgccaaagtccactgttcct
gagatgcagcgcagtaaccttgcacctgtcatcttgcagctgaaggctttgggaattgac
aatgtgctcagattcccctttctttcgccacctcctgcacagtcaatggtgcaagcttta
gaattgctgtatgctttaggaggtttggatatgcactgccgtttaacagagcctcttgga
atgagaatagcagagtttcctttgaatcctatgtttgcaaagatgcttctggaatcagga
aattttggctgctcccaggagattttgacaattgctgccatgatgcagattcaaaacatt
tttgtgatccctccaaatcaaaaagctcaggctgccaggcaacacagaaagtttgctgtg
gaagaaggtgatcatctcactatgcttaatgtttatgaagcctttgtcaaacacagcaag
agctctcagtggtgtcaggaacactttctgaactacaaagggcttgttagagcttctgtt
gtaagagagcagctgaaaaaacttctcgtccgctttaaagtgccaaagaagtccagtgaa
ggtgatccagatcccgttttgagatgcatagtttctggattctttgctaatgcagctaaa
ttccactctaccggagcttacaggactatccgtgatgaccatgaacttcatatccacccc
acttcagtgttgtatgcagagaaacctccacgctgggtagtctacaatgaagtcatacag
actgctaaatattacatgagagatgtgactgccgttgaatctgcatggctcttggaactg
gcacctcatttttaccagcaaggaacggtacggaatcagcataaagcccaaacgcatctt
tccttgaaagcaaaaagggttaaagtagatgaccactga
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