Gymnogyps californianus (California condor): 127023615
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Entry
127023615 CDS
T08687
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127023615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127023615
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127023615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
127023615
NCBI-ProteinID:
XP_050763782
LinkDB
All DBs
Position
18:6272319..6301754
Genome browser
AA seq
1737 aa
AA seq
DB search
MAAGGLCARSSRELWTILLGRSALREPAQVAAELNKHWQRLLEGLSYYKPPSTTSAEKIK
ADKDVAAPLKELGLRVSKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQALM
LKLADYYYEERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEALYK
AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPDELLAFAKMFKEQ
GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNERI
HQEMDNQLLQLGDVSHHAPVLLAWALLRHTVNPEESTNIIRRMGSTAIQLNVFQYLTKLL
RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWK
TEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
TVISPPVDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSMNHVISAEGMNAG
GYGNLLMSIEQPQGEYSVTISFLNLITTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW
RYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMASQSSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQ
HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVL
ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPP
PSESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKLLA
YHVAETEGSSCASMTEYQMLISAWRMLLIISTGHADIMHLTDSAVHQQLFLDVLNGTKVL
LLVPMSVSCLQLGSMLCTLLLILLKQWKSELGSVDKIINSLTQILEGVLQADQQMMEKTK
AKVFSALITVLQMKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDATDDKD
SMETDDASRVKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFAALEIS
LRVKQNLHFTEASLHLLLTLARTQQGAAAVAGAGVTQSVCLPLLSVYQLSTNGAIQTSAS
SRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL
ACLEEADHTVGFILQLSNFTKEWHFHLPQLMRDMQVNLCYLCQACTSLLHSRKMLQHYLQ
TKNGDSLPSSVTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHFT
PDVCQILLDQSLDLAEYNVLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKE
PFPQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgggctgtgcgcgaggagcagcagagaattatggacaatacttctgggc
agatcagctttaagagaaccagcacaggttgcggcagaattgaacaagcactggcagaga
ttgttagagggactttcatactataaaccgccaagtacgacttcagcagaaaaaataaaa
gctgataaagatgtagctgctccactaaaagagttgggtctgagggtcagcaagtttttg
ggtctggatgaagagcagagtgtgcagttgttacagtgttatcttcaagaggattacaga
ggaacaagggactctctgaagacggttcttcaggatgaaaggcagagtcaggctttgatg
ctgaagcttgctgactattactatgaagagaggatctgcattctgcgctgtgtcctccat
ctactcacttattttcaggatgagaggcacccttacacagcacaatacttccagtgtgtt
gaaaagttggacaaggaactagttcctaattaccggaaacagtttgaagcgctgtacaaa
gcagaagctcctacatgggaaacacatggaaatctcatgacagaacgtcaggtttcccgt
tggtttgtgcaatgcctccgtgaacagtccatgctcctggaagtcatcttcctctactat
gcatactttgaaatggcacctgatgagcttctggcatttgcaaagatgttcaaagaacag
ggatttggcactagacaaaccaacagacatttggtagacgagagcatggatcacctggtg
gatcgtattggctactttagtgctcttattctggtggaaggcatggaaattgactccctc
catgagcgtgctttggatgacaggacggaggagcacaagttagctaataatgagcgcatc
caccaggagatggacaatcagctgctgcagttaggggatgtctcacatcatgctccggtg
cttttggcctgggctctactccgtcacactgtaaacccggaggagtcaacaaacattatc
aggagaatgggcagcactgctatccagctgaatgttttccagtatctgacaaagctgctg
cgatcgctgagcagtggggggaagaattgtactgccagcacagcttgtatgtgtatttat
ggacttctttcctttgtcctgacgtcactggaattacatacattgggcaatcagcaggat
ataattgatgctgcatgtgaagttctggcagcttccagcattcctcagctcttctggaag
acggaacctactgcaggtctgggtattatcctggacagtgtgtgtgggatgttcccccat
cttcttactcctctccttcaactgctccaagcccttgtgtctgataaatctactgcaaaa
aaggtatacagtttcctggataaaatgtccttctatatcgaactgtacaagcataaacct
cctgatgtgatctctcatgaagatggcacactttggcgaagacaagctccaaagctcctc
tatcctcttggactaggtcaaacaaatctgcggatacctcagggaacagtgggccaagtg
atgctggatgatcgggcttatttggtacgatgggagtattcctacagcagctggacactg
tttacctgtgagattgagatgctgctccatgttgtatcgacagcagatgtgattcagcat
tgccagagggtcaagccaataattgatctggttcataaagtcatcagcactgatgtatcg
atagcagattgccttctgccaatcacgtcacgaatctacatgctcctgcagaggctaaca
actgtaatctctccccctgtggatgttattgcttcttgtgtcaattgtttgacagtactg
gctgctcggatgccagccaaggtttggactgaccttcaccatacagggttcttaccattt
gttgccaatccagtgtccagtatgaatcacgtgattagtgcagagggaatgaatgctggg
ggctatggaaacctattgatgagcatagaacagcctcaaggcgagtacagcgttaccatc
tccttcctgaacctgataacaactcttgtccggggacaacttggtagcacccagagccaa
ggacttgtgccctgcattgtgtttgtcctgaaggagatgttaccaaattaccacaaatgg
cgttataactctcatggagtgagagagaaaattggatgcctaattctgcagttgatccat
gctatactgaatttatgccccgaaatggatcctcgcagcagcaatgcccccagccttcag
tccttgtgcatcttcagcctggccaacaccgaagcagggcaagctgtcattaacatcatg
ggaattggtgtggacactattgatatggtaatggcctcccagtctagtagtgatgagtca
caaggccaaggtcaactgctgatccaaacagttaagctggcattctcggttaccaataat
gtcatccggttgaaacccccctctagcgtggtatctccactagaacaggcacttactcag
cacggtgctcatggaaacaatcttattgcggtcttggccaaatacatctaccacaagcat
gaccctgcacttccacgcctggccatccaattgctcaaacgactggctacggttgctccc
atgtctgtttatgcctgccttggtagtgatgctgctgccatccgtgatgcctttctcacc
cgcctgcagagcaagattgaggacatgcgtattaaggtcatgatactggagttcctcaca
gttgcggtggagacacaacctgggctcatcgagctgttcctgaacttggaagtgaaggat
ggcagtgatgggtcaaaggaattcagcttaggggagtggagttgcctccaagtggtctta
gagctgatagactccaaacaacaggagaggtactggtgccctcccctcttgcaccgtgct
gccattgccttcctgcatgctctgtggcaggaccgtcgagatagtgccatgctagttctg
aggacaaagccaaagttttgggaaaatttaaccaaccccctctttgggacccttcctccg
ccttcagaatcatcagagctcagtgtcttggatacctgtgccttaatcatgaaaatcatc
tgtttggagatctactatgttgtcaagggctcactggatcagtccctgaaagacacgctg
aagaatttctccaccaaaaagcgctttgcctattggtcagagtatgtgaagttactggca
tatcatgtggcagagacagagggtagcagctgtgcttccatgacagagtatcaaatgctc
atctcagcctggcggatgctgctgataatctctactggccatgcggatataatgcatctg
actgattctgcagttcatcagcagttgtttctggatgtgctaaatgggaccaaggttttg
cttctagttcccatgtcagtatcctgtctgcagctggggtctatgctatgtacccttctt
ctgatcctgctcaaacagtggaagagcgagttgggttctgtggataaaatcataaactcc
ttgacgcagattctggagggagtactacaggcagatcagcagatgatggagaaaaccaaa
gccaaagtgttctcagctcttatcactgttctgcaaatgaaggagatgaaagtgaatgag
atcccacagtactcccagctggtgttgagcgtgtgtgaaacactccaagatgaggtcatt
gcgctctttgatcagactcgacacagcctgaccttgggagatgctacagatgacaaggac
agcatggaaacagatgatgcctcccgagttaaacacaaagaccagcgagatggggtgtgt
gttctgggtctgcatctggctaaagagctctgtgaagttgatgaagatggagactactgg
ctacagattactaggaaagtccctgtgcttcctactatctttgccgcattggagatcagc
ctgagagttaaacaaaaccttcacttcacagaggcctcattacatttactgctgacctta
gcaaggactcaacagggagcagcagcagtggctggagctggtgtcacacagagtgtctgc
ctgcccctcttgagcgtgtaccagctcagcactaatggagccattcagacatctgcttca
tctcgaaagtctctggatgccccgtcttggcctggggtctatcgtctctccatgtcactg
atggaacgccttcttaaaacacttagatacaacttcctgacggaagcactggactttgtt
ggtgtccatcaagagaggattcttcagtgcctgaatgcagtacggacagtacagagcttg
gcctgtctggaagaggccgatcacactgttggcttcattctgcagctctcaaatttcaca
aaggagtggcatttccacctgccacagcttatgagggacatgcaggtgaatctgtgttac
ctgtgtcaggcctgtacctccctcctgcacagccgcaaaatgctccagcactacctgcag
acaaaaaatggtgattcccttccatcaagtgtgactccacgagtgcagcgtaatccccaa
gcctcctccaagcatcccagtcctgagtcagaggcagcagagcagaaagcactgcttaca
gtgcagtacagcctcttgaaaatcctcagcaaatctcttgccgccctgcgccatttcacc
cctgatgtctgccagatcctccttgatcagtcactggaccttgctgagtacaacgtgctc
ttcgttttgagttttaccacaccagcctttgattcagatgtcgcaccttcctttgggacc
ctccttgccacagtcaacgtggcccttaacatgttgggagagctggataagaagaaggaa
cctttccctcaggctgcagggctgaatatgcaagagggaaccaaaaccctcaagtctctg
ctcatgtttacaatggaaaactgtttctacctgctcatctcccaggctgttcggtacttg
agagacccagccgtgcatccacgtgataagcagcggatgaaacaggagctcagctctgag
ctgagtacgctgctctccagcctgtctcgttacttccgccgcggtggtccctcttcacct
gccagcggggttcttccctctccccaaggaaagtctgcctccaagctgggtcctgagggg
caggagcctttgtttcagctcgtgcaggcctttgtccggcacgtgcagagatag
DBGET
integrated database retrieval system
