Gymnogyps californianus (California condor): 127023640
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Entry
127023640 CDS
T08687
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127023640
Transcription factors [BR:
gcl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127023640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
127023640
NCBI-ProteinID:
XP_050763827
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All DBs
Position
1:complement(144783153..145120166)
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AA seq
772 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVGEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQENCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPLKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKIPGI
PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPTL
RINSGASSLKSSVPATLASPSARANTIDILSSITSSGYLNDHDAVTKAIQEARQMKEQLR
REQQVLDGKVAVVNSLGLNNCRTEKDKTTLETLTQQLAVKQSEDGKFSHAMMDFNMSGDS
DGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG
SRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRN
RRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQS
TYGIKGEEPHIKEEMQTDDVNGEIYDEYDEEEDDPDADYGSDSENHIAGQAN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggga
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagagaactgtggccat
aggactcccacttctcagcacaacacaatggaagttgatggcaataaagtgatgtcttca
tttgccccgcacaactcatctacctcacccttgaaggcagaagaaggtgggcgtcagagt
ggagaatcattgtccagcacagccctgggaacccctgaaaggcgcaaagggagcctagcg
gatgttgtagacacccttaagcaaagaaaaatggaagagctcatcaaaaatgagccagaa
gaaactcccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgccatg
ggatcagggaactttggagaaataaaagggactccagaaagcctcgctgagaaagaaagg
cagctcatgggtatgatcaatcagctgaccagtttgcgagaacagctgctcgcagctcat
gatgaacagaagaaactggctgcatcacagatcgagaaacaacgccaacaaatggagctg
gctaagcagcaacaagaacagattgcaagacaacagcagcagctcctgcagcagcaacac
aaaattaaccttcttcagcaacagatccaggtccagggtcagctgcctccattaatgatt
cccgtattccctccagaccaacgaaccctagcagcagctgcacagcaaggattccttctt
cctcctggtttcagctacaaagcgggatgcagtgacccttaccccgttcagctgatccca
actaccatggcagctgctgccgcagcaacaccaggcttaggcccactccaactgcagcag
ttgtatgctgcccaacttgctgctatgcaagtgtctccaggaggcaagatacctggcata
ccccagggtaaccttggtgctgctgtatcgcctaccagcatccacacagacaagagcaca
aacagccctccacccaaaagcaaggatgaagtggcccagcctctgaacctttcagccaaa
cccaagacatctgatggcaagtctcccacatcacccacctctcctcatatgccaactctg
agaataaatagtggggccagttcactaaagtcctccgtgccagcaacgttagctagtcct
tcggccagagctaacacaatagatatcctttcttctatcacgtcgtcaggttatttaaat
gaccacgatgctgttactaaggcaatccaggaggcccgacagatgaaggagcaacttcgg
agggaacaacaggtgctggatgggaaggtggctgttgtgaatagcctgggtctcaataac
tgcaggacagaaaaggacaaaacaacactggagaccctgactcagcaactggcagtaaaa
cagagtgaagacgggaagtttagccacgcaatgatggatttcaacatgagtggagattct
gacggaagtgcaggagtttcagagtctagaatttatcgggaatccagagggcgtggtagc
aatgagccccatatcaagcgcccaatgaatgcgttcatggtgtgggctaaagatgaacgg
aggaagatccttcaagccttccctgacatgcacaactccaatatcagcaagatactagga
tctcgctggaaagctatgacgaacctagagaagcagccatactatgaggagcaggcccga
ctcagcaaacagcacctggagaaatacccagactacaaatacaagccaaggccgaagcgt
acctgccttgtagatggcaaaaagttacgcattggcgagtacaaggctatcatgcgcaac
agacgccaggagatgaggcagtattttaatgttgggcaacaagcacagattcccattgcc
accgcgggcgtagtttacccaggagccattgccatggcaggaatgccttccccacatctg
ccctccgagcactcgagcgtgtccagcagcccagagcccgggatgcccgtcatccagagc
acttacggcatcaaaggcgaggagcctcatatcaaggaagagatgcagaccgatgacgtc
aatggagaaatctacgatgaatacgatgaggaagaggacgaccccgatgcggactatggc
agtgacagtgaaaatcacattgcggggcaagccaactga
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