Gymnogyps californianus (California condor): 127023646
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Entry
127023646 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: whirlin
KO
K21879
whirlin
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gcl03037
]
127023646
Cilium and associated proteins [BR:
gcl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
127023646
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Ortholog
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
CCM2_C
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
127023646
NCBI-ProteinID:
XP_050763830
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All DBs
Position
18:complement(2848485..2903788)
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AA seq
920 aa
AA seq
DB search
MSAELDGLSVHSSSSSSGSLGXGGGAGAAPLSANVRRLHQALTALLSEAERERFILCLNA
YHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPP
APAPPPVVPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGD
QILGVNGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSP
PMGLPHHQNSSLRKDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYIT
GVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHART
TVDETRWIASSQIGETLVNSAGAVGDHAAEATARPVFYRGLAGSQVTLSSMVNQTRVMLE
EQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISPQD
LDRFDNLVLKREIESMKARQPSGPSIGTDSYSVMSYSDTISSSSSHFTATTVSSARNTSE
LEGGGDSHQSSINTLPDISLDDLSSFPDEPPNFKPPPPPSAPQMLDPSAAQHRNPGKDKP
KRPSSESSQSGLFFVAPRNPTHPPSHPEKDTVSMTSTATTSTEESAPSAIYATISPALHS
SRRQMDAQLSLVSQHPIGPFPRVQSPTRLKNPPPDDPAAGGLQSPPSPSPPPPPPHPAPP
PPDKGSPQAMANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQTLSEDSGVD
IGEVEMSGKDKSRQPVPGKSRSLKEATRSEGAAEGPSKPPGLLEPTSCLIRVSKSAPTLG
IAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRGKEHREAARIIAEA
FKLKEKDYIDFLVTEFNVAL
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagctggacgggctgtcggtgcactcctcctcctcctcgtcgggctcgctg
ggcntcggcggcggggccggcgccgcgccgctgtcggccaacgtgcggcggctgcaccag
gcgctgacggcgctgctgagcgaggcggagcgggagcgcttcatcctctgcctcaacgcc
taccacggccgccgcaacgtctgcgacctggtgcgctccctccgcgccctcctcgacggg
ccccgccgccggcagctcctgccgctgctccgcctcgtcctgccgcgctccgaccagctc
ctcttcgaccagtacaccgccgaggggccctacctgccgccgcccggccggcccccgccg
gcccccgccccgccgccggtggtccccggcgagctgcggcaggtgaccctgcggcggagc
aaggcccacgagggcctgggcttcagcatccgcggcggggccgagcacggcgtcggtatc
tacgtgtccctggtggaaccgggctccctggccgagcgggaggggctgcgcgtcggcgac
cagatcctgggtgtcaacggcaagtccttggacagggtgacccacgccgaggctgtcaag
gtactgaaaggctgcaagaagctgaacctgtctgtacattcggtgggacgcatcccaggg
ggctatgtcaccaaccacatctacacctgggtggacccacagggccggagcgtgtccccg
ccgatgggcctgccacaccaccagaacagctccctccgcaaggacagcgaaaagaggagc
cacctccagctcctgcaagagggagatgagaagaaggtgaatctggtcctgaatgaaggg
aagtccctgggcctcatgatccgaggaggggccgaatattccctgggcatctacatcacc
ggtgtagataaaggctctgaagcagagagcactggcttaaaggtaggagaccagatcctg
gaggtgaacggcaggagcttcctcagcatcccccacgatgaggcggtgaagctgctcaag
tcttcccgccacctcatcatgacggtgaaggacatcgggaggctgccccacgcccgcacc
accgtggacgagactaggtggatagcaagctcccagatcggagagaccctcgtcaactca
gcaggggcagtgggcgaccatgctgcggaggcgacagccaggcctgtattttaccggggc
ctggccggctcccaggtaacgctgagcagcatggtgaaccagacccgagtcatgctggag
gaacaggcacggcacctgctgaatgaacaggagcgggcgaccatggggtactaccttgat
gagtataaggaaggcaacatctctgtggatgctctggtcatggcactcttcgagctactc
aatacacatgctaagttctcactgctttcagaggtgcggggtgtgatctccccgcaagac
ctcgaccgctttgacaacctggtgctgaagagagagatcgagtccatgaaggcacgccag
ccctcagggcccagcatcggcaccgactcctactctgtgatgtcctacagtgataccatc
tcttcctccagcagccacttcactgccacaactgtcagctcagcccggaacacatcagaa
ttggagggaggtggagacagccaccaaagtagcatcaacaccctgccggacatctccctg
gatgatctctcctccttcccagatgaaccacccaacttcaagcctccgcctcctccttca
gcccctcagatgctggacccctctgctgcccagcacaggaacccagggaaagacaagccc
aagcgcccttcctccgagtcctctcagtcaggccttttcttcgtggccccccgaaacccc
acgcaccctcctagccaccccgagaaggacacagtcagcatgacctccactgctaccaca
tccaccgaggagtctgccccaagtgctatctatgctaccatttccccggccctgcacagc
tccaggaggcaaatggatgcccagctctccttggtcagccagcaccccatcggtcccttc
cctagggtccagtccccaacgaggctgaagaacccacccccagatgaccctgcagccggt
gggcttcagagccccccttccccgtcccctcctcctcccccaccccacccggcaccccct
ccaccggacaagggcagcccgcaggccatggccaaccagcatttcatcatggtggaggta
caccaacccaacagcgagcccgacgtcaatgaagtgaggcccttaccccaggccagagcc
tccacgctctcccagctgtcggacagcgggcagaccctcagcgaggacagcggggtggac
atcggggaggtcgagatgagcggcaaggacaagagccggcagccggtccctgggaaaagc
cgaagcctcaaggaggccacgaggagcgagggggcagcagaagggccctccaagccgccg
gggctcctggagcccacgtcgtgtctgatccgagtgtccaagagcgcaccgaccttgggg
atcgccatcgagggtggagcaaacacgcggcagccgctgccccgcatcgtcaccatccag
cgcgggggctcggcgcacaactgcgggaagctgaaggtgggccacgtcattttggaggtg
aacggcacggggctacggggcaaagagcatcgggaagctgcccgtatcattgctgaagcc
tttaagctgaaggaaaaggactacattgatttcttggtcacagaattcaacgtcgccctt
tag
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