Gymnogyps californianus (California condor): 127023698
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Entry
127023698 CDS
T08687
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127023698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gcl03041
]
127023698
Spliceosome [BR:
gcl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127023698
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
127023698
NCBI-ProteinID:
XP_050763923
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Position
18:complement(1548306..1557170)
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AA seq
536 aa
AA seq
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MASTRAPAARGGARPTVRAPAPAEATKSKPTEESDAPPPKRAPIFYGSLEEKERERLAKG
ESGLLGKEGMKAAIEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDS
EVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTW
YHEGPRSLKTARLWLANYSLPRAVKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCS
QIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFHPKAT
VSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHS
WRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH
LKEIYGVNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLL
TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcctccacgcgggcaccggcggcgcgcggcggcgcccggcccaccgtgcgggccccc
gcgcctgcggaggccacaaagagcaagcccacagaagaaagcgatgctcctccacccaag
agagcccccatcttttatggcagtttggaagagaaggaaagggagcgtctggcaaaagga
gaatcagggctgctgggaaaagaagggatgaaagctgcgatcgaggctggcaacatcaac
ataagcagcggtgaggtctttgatctcgaagaccacatgagcgagcggcaggcggaagtg
ctggctgagtttgagcgcaggaagagagcccggcagatcaacgtgtccactgacgactct
gaagtgaaagcctgtttgcgagcgcttggggagcccatcacgctctttggagaaggtcct
gcagaaaggagggagagattaagaaatatcctttcggtggttggcacagatgcattaaaa
aagaccaggaaagatgacgacaggtctaaaaaatccaaagaagagtatcagcaaacctgg
taccacgaaggaccacgcagtctgaaaacagcgaggctgtggcttgctaactactctctc
cccagggcagtgaagcggctagaagaagcccggctgctcaaagagattccagaggcaacc
aggacatcgcagagacaggagctacacaaatccctgcgatccttgaataacttctgcagt
cagattggagacgatcgcccactgtcctactgccacttcagcccgaattccaaactcctc
gctactgcctgttggagcggattgtgcaagctctggtccgtgcctgactgcaaccttgtt
cacaccttacgaggacataacaccaacgtaggagcaatagtcttccatcccaaagcgact
gtctccctagacaagaaggacgttaacctggcctcgtgtgcggctgatggttctgtcaaa
ctctggagccttgaaagtgatgaaccggtggcagatattgaaggacacagcatgagagtg
gcacgtgtgatgtggcacccctctgggaggttcctgggtactacctgctacgatcactcg
tggcgcttgtgggacttggaagctcaggaagagattctccatcaggaggggcacagcaaa
ggggtctatgacattgcctttcacacggatgggtctctcgctgggactggtggactggat
gcttttggccgggtgtgggacttgcgcacgggacgctgtatcatgtttctagaaggccac
ctgaaggagatctacggggttaacttctccccaaatggataccacgtcgcaactggcagt
ggtgacaatacttgcaaggtatgggacctccgccagaggaagtgcatctacaccatccct
gcccatcagaacctggtgaccggcgtgaaatttgaacccaatcacggtaacttcctgctc
acaggcgcttacgacaacaccgcaaagatctggactcaccccggctggtcccctttgaaa
acgctggctggtcacgagggaaaggtgatgggactggatatctccctcgacggccagctg
atagcgacctgctcctacgacagaaccttcaagctgtggacagcggagtag
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