Gymnogyps californianus (California condor): 127023963
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Entry
127023963 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127023963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gcl02000
]
127023963
Transporters [BR:
gcl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
127023963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_22
AAA_16
MMR_HSR1
AAA_23
nSTAND3
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
127023963
NCBI-ProteinID:
XP_050764291
LinkDB
All DBs
Position
19:2760257..2791694
Genome browser
AA seq
1648 aa
AA seq
DB search
MAPATPREAGVWRQTRALLFKNCLIKCRTKKSSVQEVLFPLFFLFWLILMSMMHPHRKYN
EVANTNLGPLDTSMLVNFVIGYTPPTRMAREIMKKVAFDNFEDGIITEEYLSEEELQEAS
AFKPSNFVGVVFNDAMSYQLRFPDSVAMSSIYMESRASCSNVRKGCESVTYWSSGFTALQ
ACIDAAIIQLKTNQSVWEQLELTRAIVMGEAAVVEIDSFPRAIILIYLVIAFSPFGYYLA
IHIVAEKERKLKEFLKILGLHDTAFWLSWVLLYMSLIFVMSILMAVIATASSLFPQSSAF
VIFLLFFLYGISSVFFALMLTPLFKKSKHVGIVEFLATLAFGFVGLNIVLLEDFPKSFVW
IFSPLCQCSFLIGVAQVMHLEDYEDGATFSNLNHGPYPLFISLILLVLDSIFYLLVAVYL
DQVIPGEFGLRRTPFFFMKPSFWSKRRKNYKELYESSINGSLSFSEIVEPVPSEFQGKEA
IRISCVQKTFRKKGETVEALRNLSFDIYEGQITALLGHSGTGKTTLMNILCGLCPPTDGF
VSVYGHKVSEIDEMLEVRQIAGVCPQSDIHFDILTVEENLSIFAAIKGIPQNDLIQEVQK
VLLDLDMQPIRDNQAKKLSGGQKRRLSVGVAVLGNPKVLLLDEPTAGMDPCSRHIVWNLL
KNRKANRVTVFSTHFMDEADILADRKAVISQGMLKCLGSSLFLKSKWGIGYRLSMHIDAY
CNTEATTSLIRQHIPAASLIQENDEQLVYTLPLKDMDKFAGLFSDLDTHSHLGVITYGVS
MTTLEDVYLKLEVEAEIDQADYSVFNSQQVQDEMDTKSLDDMEQSLLMLSETKAPAMSNT
ALWKKQVSTIAKVHLLSLKRENKCVRVMLLLFLIFLVVQILLFFIHHIIKNSVAAIKLSP
DLYLLKPGENYHKYRSRLLLQNSTESDIDDIVHSLGSMNILLEMFNDSDYVSAAPHSAAL
NVFDLESRQNYVFTVIFNSTMVHSLPVLMNVVSNLLLRNLNVTESIQIWSNPFVQNLPDT
IFRLEIYFEAVLLGIIITGMPPYFAMDNAENHKIKAYTQLKIAGLYPSAYWTGQAIVDLP
LFFSILVLMIGSLFAFHYGVYFYVGKFLAVIFCLIGYVPSVVLFTYVVSFTFKKVQNTKE
FWSFIFSVTALLCTVVTEVAFFLDYYLVTTILHYVFSIFIPIYPLIGCLICFIKVSWKGK
RKNGGYYDPWDRLLVAVIAPYLQCVVWLFLLRCFELKNGGXTVREDLFFRKCFTKAKTWK
FPDVPHDENEDEDVKAERLRVQEILSSPKSEEMPAILVSSLHKEFDERKEFLLGRKIKKV
ATKHVSLCVKKGEILGLLGPNGAGKSTLINMLIGEIEPTSGQVLMGDYSFGLNGGDDSVK
FVGYCPQTNPLWPDITLQEHFEIYGAIKGMSQSDVKEVVKRIASALDLKDHLQKTTKKLG
VGLKRKLCFALSMLGNPRVTLLDEPSTGMDPKAKQHMWRAIRAAFKNKERAAILTTHYME
EADAVCDRVAILVSGQLRCIGTVQHLKSKFGRGYFLEMKLKETADVQQVEYLQSQILHIF
PNANRQESFASILAYKIPKEDVQSLSHSFSKLEEVKHAFNIEEYSFSQATLEQVFVELAK
EQEEEDSSFGTLNSTLWWERTQEDRVIF
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagcaactccaagagaagcaggagtatggagacaaaccagagctctcttattc
aagaactgtcttattaagtgtaggactaaaaaaagcagcgttcaggaggtccttttccca
ctctttttcttgttttggctaattctgatgagcatgatgcatccgcacaggaaatacaac
gaggtcgccaacaccaacctcggccctctggatacctccatgctggtgaattttgtcatc
gggtacacaccgccaacccgaatggcacgagaaatcatgaagaaagtggcttttgataac
ttcgaagatggcatcatcacagaggagtatttaagcgaagaggagctgcaagaggctagt
gcttttaaaccctcaaactttgtgggtgtagtgttcaacgatgccatgtcctaccagctg
aggtttcccgattctgtcgcgatgtcttccatttatatggaatcgagagccagttgctcc
aatgtccggaaaggatgcgaatcggtaacgtactggagctcgggatttacggctctgcaa
gcctgcatcgatgctgcaattatacagctgaagactaatcaatcggtttgggaacaactt
gaattgacgagagcaatagtcatgggagaggctgcagtggtggaaatagatagttttcct
cgtgcgatcattttaatttacctagtgatcgctttctcaccgtttgggtattatttggca
attcatattgtggcagaaaaggagaggaagttgaaggaattcttaaaaatattgggactt
cacgacactgccttttggctttcttgggtgctgctctacatgagcctgatttttgtcatg
tccattctcatggcggtgattgcgacggcctcttccctctttccccagagcagtgccttt
gtgatatttctcctttttttcctgtatggaatctcttcagttttctttgcacttatgctg
acacctctatttaaaaagtcgaagcacgtgggtatagtggagttcttggcaacactggct
tttggttttgtgggccttaatattgtcctactggaagatttccccaagtctttcgtgtgg
attttcagccccttgtgtcagtgcagcttcttgatcggtgtcgcgcaggtcatgcatcta
gaagattatgaagatggtgcaaccttttcaaatctaaaccacggtccttacccgctcttt
atctctcttattttattggtgctggatagcatattttatctgcttgtagctgtctacctt
gatcaggttatcccaggggagtttggactacgccgcacgccatttttcttcatgaagccc
tcgttttggtcaaagcgcagaaaaaattacaaggagttgtacgagagcagcatcaatggc
agtttaagtttcagtgagatagttgagcctgtgccttctgaatttcaggggaaagaagcc
atcagaatcagctgtgttcagaaaacattcaggaaaaagggggaaactgtggaggctctc
agaaatttatccttcgacatctatgaaggccagatcacggctctgctggggcacagcggg
accgggaagacgacactgatgaacatcctttgcgggctgtgtccaccgacagacgggttt
gtctctgtctacgggcacaaagtctccgaaatcgatgaaatgcttgaagtgcgacaaata
gcgggggtgtgccctcagtccgacatacactttgatatattaactgtggaggagaatctc
tccatatttgctgcaattaaaggaatccctcagaatgatttgatacaagaggtgcagaaa
gtgttgttggatttggatatgcagcctatcagagacaatcaagctaaaaaattaagcggg
gggcagaaaaggcggctgtcggtgggagttgctgttcttgggaacccaaaggttttgctg
ctggatgagccgactgcaggtatggatccgtgttcgcggcacatcgtctggaacctcctg
aaaaacagaaaagcgaatcgcgtgaccgttttcagtactcacttcatggacgaggcggat
atcctcgccgatcgtaaagctgtgatttctcaagggatgttaaaatgccttggatcatct
ctctttctcaaaagcaaatggggaattggctaccgcttgagtatgcacatcgatgcctac
tgcaacacggaagcgacaacctcgctgataagacagcacatacctgcagccagcctgatc
caagagaacgacgagcagctcgtgtacaccctgccgctcaaggacatggacaagttcgca
ggattgttttctgacctcgacactcattcccatttgggcgttatcacctacggcgtttcc
atgacgacgctggaggatgtctatctgaagctggaagttgaggcagagatcgatcaagca
gattatagcgtgttcaattcccagcaagtgcaggatgaaatggatacaaaatccctcgac
gatatggagcagagcctcctgatgctctcggagacgaaggcgccggcgatgagcaataca
gccctctggaagaagcaggtttccaccatagcgaaagttcatctccttagtctcaagcgg
gaaaataaatgcgtgagagttatgttgttgctttttctgatttttcttgtagttcagatt
ttattgtttttcatacaccacatcatcaaaaattctgtagctgctatcaaactttcccca
gatttgtacttgctgaagcccggagagaactatcacaagtacaggagtcgactcctgctg
cagaactccacagaatcggatatcgatgacattgtccactctcttgggagcatgaacata
ctcttggagatgttcaatgacagcgattacgtctcggctgcccctcacagcgcagcttta
aacgtgtttgaccttgaatccagacagaactatgttttcacagtcatattcaacagtacc
atggtgcattccctgccagttttgatgaacgttgtcagcaatctacttctgcgcaattta
aacgtgacggagagcattcaaatctggagcaatcccttcgttcagaatcttccagacaca
attttcagactggagatctattttgaagctgtgttactgggaatcattattactggaatg
ccaccctattttgctatggacaacgcagaaaaccataagatcaaagcgtacacgcagctg
aagatagcggggctttatccctccgcttactggactgggcaagccattgtcgacctcccg
ctgtttttctccatccttgtcctgatgataggcagcctcttcgcctttcactacggcgtt
tatttctacgtgggcaagttcctcgctgtgattttctgcctgattggttatgtcccatca
gtcgtgctcttcacttacgtggtctccttcacatttaaaaaagtccagaatacgaaagaa
ttttggtcatttatattttcagtgacagccttgctctgtacagttgtcactgaagtggcc
ttttttctggactattacctggtaaccaccatcctgcattacgtcttctccatcttcatt
cctatttatccccttattggctgtctgatttgttttataaaggtctcatggaaaggcaag
cgaaagaacggaggatactacgacccgtgggaccgcctcctggtagcagttatagctccc
tatttgcagtgtgtcgtgtggctcttcctactgcgatgtttcgagctgaagaatggagga
nggacagttagagaggatctgtttttcagaaaatgttttacaaaagccaaaacctggaag
ttcccagatgtcccgcatgacgagaacgaagatgaagacgtgaaggcggagaggctgcga
gtccaagaaatactgagcagccccaaaagcgaggagatgccagcaatcctggtcagcagc
ttgcacaaagagtttgatgaaagaaaggaatttcttctggggagaaaaataaagaaagtg
gcaacgaaacatgtttctctctgcgtaaaaaaaggagaaatactgggtttgttaggaccc
aacggagctgggaaaagcactttaattaatatgctcattggagagattgagccaaccagt
gggcaagttctgatgggagattattctttcggcctgaacggcggagatgactcagtgaaa
tttgtggggtactgtcctcaaacgaatccgctttggccagatattacattgcaggaacac
tttgaaatttatggcgctatcaaaggaatgagtcagtctgatgttaaggaagtcgtaaaa
cgcatcgcaagtgccctggatttaaaagaccacctgcagaagacaacgaagaagctgggc
gtagggctgaaacgcaagctatgctttgccctgagtatgctgggcaacccgcgggtcacg
ctgttggatgaaccatcaaccgggatggatcccaaagccaagcagcacatgtggcgggca
attcgagcagcatttaaaaataaggagagagcagctatcctgaccactcactacatggaa
gaggccgatgctgtctgtgaccgtgtggccatcctggtgtccgggcagctcagatgtata
ggtactgtccaacacctgaagagtaagtttggcagaggatacttcttggaaatgaaatta
aaagaaacagcagatgtacagcaggtggagtatctgcagagccagattttgcacatcttc
ccgaatgcgaatcgtcaggaaagttttgcttctattttggcgtataaaattcctaaagaa
gatgtacagtcgctttcacattctttttccaagctggaagaagtaaaacacgccttcaac
atcgaggagtacagcttttctcaggcaacactggaacaggtttttgtggagcttgctaaa
gagcaggaggaggaggacagcagcttcggcaccctgaacagcacgctctggtgggagagg
acgcaggaagaccgagtcattttctga
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integrated database retrieval system
