Gymnogyps californianus (California condor): 127024248
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Entry
127024248 CDS
T08687
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127024248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gcl03041
]
127024248
Spliceosome [BR:
gcl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127024248
Complex C
U5 SnRNP specific factors
127024248
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
127024248
NCBI-ProteinID:
XP_050764649
LinkDB
All DBs
Position
20:complement(6748697..6768318)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcttcccgtaccgcggcggctgcgccccggtgcccagcccgctggcgccg
ctgcccgactacatgtctgaggagaagctgcaggagaaagcccgcaaatggcagcagctg
caggccaagcgctatgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcacgtccggaagatcatccgcgaccatggtgacatgaccaacaggaag
ttccgtcacgacaagcgtgtctacctaggtgctctgaagtacatgcctcatgctgttctg
aagctcttggagaacatgcccatgccctgggagcaaatcagagatgttcccgtcttgtac
catatcacaggcgccatctcttttgtgaatgagattccctgggtcatagagccggtgtac
attgctcagtgggggtcgatgtggattatgatgaggcgagagaagagggataggcgtcac
ttcaagaggatgagattccccccatttgatgatgaagaaccccctctggattatgctgat
aacatcctggacgtggagcccctggaagcgattcagctggagctggatccagaggaggat
gcccctgtgctggactggttctatgaccaccagccgctgaaagataacaggaagtatgtg
aatggttcaacgtaccagcgttggcagttcactctcccgatgatgtccacgctgtaccgg
ctggccaatcagctgctcactgaccttgtggatgacaactatttctatttgtttgacctg
aaagcgttctttacctccaaggcactgaacatggctattcctggaggtcccaagttcgag
cctcttgttagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aaaattatcatcaggcagccgatcaggacagagtacaaaatcgctttcccatacctgtac
aataacctgccacaccatgtccacctgacctggtatcatactccaaacgtcgttttcatt
aaaacagaagatcctgatctcccagctttttacttcgatccactgatcaaccccatttca
cacagacattctgtcaagagtcaggaaccgttgcctgatgatgatgaagagtttgagttg
ccagagtttgtggaacctttcctgaaggataccccgctctacacagataacacagccaat
ggcattgccctgctgtgggccccccggcccttcaacctgaggtctgggaggactcggaga
gctcttgatatcccactagtcaagaactggtaccgtgagcactgcccagcaggccagcca
gtgaaagtgcgagtctcctatcagaagctactgaaatactatgttctgaatgcactcaag
cacagacctcccaaggcccagaagaagaggtacctgttccgctccttcaaggctacgaag
tttttccagtcgacgaagctggactgggtggaagtaggcctgcaggtgtgtcgccagggc
tacaatatgctgaacttgctgatccacagaaagaacctgaactaccttcacttggattac
aacttcaacctgaagcccgtgaagaccctcaccactaaggaaaggaagaaatctcgtttt
ggtaatgctttccatctgtgccgagaggttctgcggctgactaagttggtggtggacagc
catgtccaatacagacttggaaacgtggatgcgtttcagttggcagatggcttgcagtac
atctttgcccatgtgggtcagctgacaggaatgtaccgatacaagtacaaactgatgagg
cagattcggatgtgcaaggacctgaaacatctcatctactacaggtttaacacggggcct
gtgggcaaaggtcctggctgtggcttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcacgccactgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcaaagggtgtagcaaagactgtcacaaagcagcgtgtggagtctcac
tttgacctggagctgagggcagctgttatgcatgacattctggacatgatgccagaagga
atcaaacagaacaaagccagaaccatcctgcagcatctgagcgaggcctggcggtgctgg
aaggccaatatcccctggaaggtgccagggctgccaactcctattgaaaacatgattctg
aggtacgtgaaggcaaaagctgactggtggacaaatacagctcactacaacagggagcgg
atccgtcggggtgccactgtagacaaaaccgtctgtaagaagaatctgggccggctgacc
agactctacttaaaagctgagcaggaacggcagcataattacttgaaggatgggccttac
atcactgcggaggaggctgttgctgtgtacacaaccacagtgcactggctggaaagcagg
aggttctcacccattcccttccctccgctgtcctacaagcatgacaccaagttgctcata
ttagccctggagaggctgaaggaagcttacagtgtgaaatctcgcctgaatcagtcgcag
agagaggagttgggcttgattgaacaggcttatgataatcctcatgaagctctgtccaga
atcaaacgacaccttttaactcagagagcattcaaggaggtgggtattgagttcatggat
ctctacagccacttagttcctgtctatgatgttgagcccctggagaaaatcacagatgct
tatctggatcagtacttgtggtatgaggccgataagcgaagactcttccctccatggatc
aaacctgccgacactgaacctcctccactgttggtgtacaagtggtgccaaggcattaat
aatctgcaagatgtttgggaaacgagtgaaggtgaatgcaatgtgatgctggaatctcga
tttgagaagatgtatgagaagattgacctgacgttgctcaacaggctgttgcgtcttatt
gttgatcacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctatgggattattcgtgggctgcagtttgcttccttcatt
gtccagtattatgggcttgtgatggacctgctggtgctgggtctgcaccgtgccagtgaa
atggctgggcctccccagatgccaaatgacttcctcagcttccaagacattgccactgag
gtggcccatcccattcgcctcttctgcagatacattgaccgtattcacatcttcttcagg
tttacagcagatgaggcaagagacttgattcagcggtacctgacagagcatccagatccc
aacaacgagaacattgtaggctacaacaacaagaagtgctggccccgggatgctcggatg
cgcctcatgaaacatgatgtgaaccttggtcgtgctgtattctgggatatcaagaaccgt
ttgcctcgatcagtcaccacagtgcagtgggagaatagcttcgtatctgtttacagcaag
gataaccccaatttgctgtttaacatgtgtgggtttgagtgccgcatcttgcccaagtgc
cgcaccagctatgaggagttcacccacaaggatggtgtctggaacttgcagaatgaggtc
accaaggagcgcacagctcagtgcttcctgcgtgtggatgatgagtccatgcagagattt
cacaacagagtgaggcagatcctcatggcatctggctccacaaccttcactaagattgtc
aataaatggaatacagctctgattggcttgatgacgtatttccgggaagctgttgtaaat
actcaggagttgcttgatttgctggtgaagtgtgagaataaaatccagactcgaatcaaa
attggtctgaattccaaaatgcccagccgttttccgccggtggtgttttacacccctaaa
gagctgggggggctgggcatgctctccatgggccacgttctcatcccacagtctgacctg
aggtggtccaagcagacagatgttggcatcactcacttccgctcaggaatgagtcacgag
gaggaccagctcatcccgaatttgtatcgttacatccagccatgggagagtgaattcatt
gactcccagagagtatgggcagagtatgccctgaagcgacaagaggctatagcccagaac
aggcgtctgacgctagaggatctggaggactcatgggacaggggaattcctcgtattaac
acccttttccagaaggaccggcacaccctagcttatgataagggatggagagtcaggact
gacttcaaacagtatcaggtcctgaaacagaacccgttctggtggacacatcagcgccat
gatggcaaactctggaacctgaacaactaccgcacagatatgatccaggcacttggtgga
gtggaaggaatcctggagcacactctcttcaagggcacttacttccccacatgggagggt
cttttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacgaat
gcccagagatctggtttgaaccaaattccaaacagaagattcaccctgtggtggtctcct
actattaacagagccaacgtatatgttgggtttcaggtgcagctggatttgacaggcatc
tttatgcacggcaagatccccacactgaagatttctctcatccagattttccgagctcac
ttgtggcaaaagatccatgagagcattgtgatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagacagtgcagaaggagacgatccatcccaggaagtcatac
aagatgaattcctcatgtgcagatatccttctctttgcttcctataagtggaatgtatca
cgtccatcgttgctcgcagattccaaagatgtgatggacagcaccaccactcagaagtac
tggatagatatccagctgcgctggggagattacgattcccatgatatcgagcgctacgca
agagccaagttcctggactacactacagacaacatgagcatctatccgtctcctactggt
gtgctcattgccattgatctggcctataacttgcacagtgcttatgggaactggttccct
gggagcaaacctctgatccagcaggctatggccaaaattatgaaagcaaatcctgcgctg
tatgtgttgagagaacgaatccgcaaggggttgcagctgtactcatctgagcccacagaa
ccatacctttcctcccagaactacggagagctcttctccaaccagatcatctggtttgtg
gatgacaccaacgtgtacagagtgaccattcacaagacttttgaagggaatttgaccaca
aaacccatcaatggagccattttcatcttcaatcccaggactggacagctcttcctgaag
atcatccatacgtctgtgtgggcaggacagaagcgtctaggacagctggccaagtggaag
actgctgaagaagtggctgccttgattcggtcacttcccgtggaggagcagcctaagcag
atcatagtgactcggaagggcatgttggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcagagttgcagctgcccttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaggctactgaaccccagatggttctcttcaatctctat
gatgactggctgaaaaccatctcttcctacacggcattctctcgtctgattctgattctc
cgggcactccatgtgaataacgatcgagccaaagttattctgaaaccagacaagacaacc
ataacggagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtggag
gtgcagctgaaggatctcatccttgctgactatggcaagaagaacaatgtgaacgttgcg
tccctgacacagtcagagatccgagacattatcctgggcatggagatctctgccccctct
cagcagagacagcagattgcagaaattgagaagcaaaccaaggagcagtcacaactgacg
gccacgcagacccgcacagttaacaaacacggggatgaaatcatcacctccacaaccagc
aactacgaaacgcagactttctcctccaagactgagtggcgagtcagagcaatttctgct
gccaacctccacctgcgaacaaaccacatttatgtttcgtcagacgatataaaggaaacg
ggctatacgtacattcttcccaagaacgtgttgaagaaattcatctgcatctcagatctg
cgggcccagattgcgggttacctgtatggagtgagccctcccgataacccccaagtgaag
gagatccggtgcattgtgatggtgccccagtggggaacgcaccagactgtgcatctcccg
gggcagctgccgcagcacgaatatctcaaggaaatggaacctctgggatggattcacacc
caaccgaacgagtcccctcagctctcgccgcaggatgtcaccacccatgccaaggtcatg
gctgacaacccctcctgggacggggagaagaccatcatcatcacctgcagttttacgcca
ggctcctgcacgctgacagcctacaaactgacccccagcggctacgagtggggcaggcag
aacacggacaaagggaacaaccccaagggctacctgccctcccattacgagagggtgcag
atgctcctgtcggatcgcttcctcggcttcttcatggtcccggcgcaagggtcctggaac
tacaacttcatgggtgttcgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgcccttctcatttcctcaacttcgccctgctg
caggagggggaggtttactccgccgaccgggaggacctctacgcctag
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integrated database retrieval system
