Gymnogyps californianus (California condor): 127024288
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Entry
127024288 CDS
T08687
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127024288
03036 Chromosome and associated proteins [BR:
gcl03036
]
127024288
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127024288
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
127024288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
127024288
NCBI-ProteinID:
XP_050764721
LinkDB
All DBs
Position
20:7206014..7230020
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
EETLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtagaaagtgaagcggaggagtcggaggaggagtacaaccaggacggg
gaggttgtgcccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggaggagaatctcgatgatcaagatgagcaggggaacctgaaagggttcattaatgat
gatgacgatgaggaagaggaggaggaggaagaagccagtgactctggagactctgaggac
gatgttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggtgttaaagtcaaaagacaaaaattcaggcgtgtgcga
aaaatgtccgatgacgaggatgacgaggaggaagactatggaaaggaagaacatgagaag
gaagccattgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaggctgtt
gaagctcctgttgctcctccagaagaggaagaggaggaggaggaagatgaatctgacatc
gatgacttcattgtcgacgacgatggacaacctctgaagaagccaaaatggcgaaagaag
ctccctggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggacttc
gactatgatgagtttgagaagtacaacgagtacgatgaggagatggaggaggaatatgag
tatgaggatgaagaagctgaaggggagacccgtgtacgacccaaaaagactgccaagaag
cgcgtcagtcggcgtagcatctttgagatgtacgagcccagtgaactggagagcagtcac
ctcacggaccaggacaacgagatccgcatgacagacatgcccgagaggttccagttgcga
tccatcccggtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttac
aggaatgcatttgcgacacctaccatctccttgcaggaaagttctgactacctcgaccgt
ggacaagccagcagcagcttcagccgcaaggggccgagcaccatccagaagattaaagaa
gccctgaatttcatgagaaatcaacattttgaggtcccattcatcgccttctacagaaag
gaatatgtggagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgag
aagtggacccagctgaagatccgcaagcagaacctgacacgtctgtttgagaagatgcag
gcctaccagtatgaacaaatctctgctgacccagacaagcccttggcagatggaataagg
gccctggatactactgacatggagaggctgaaggacgtgcagtccatggacgagctgaag
gacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gccaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaggaaggt
gaaggggaggatgcagaagatgatgagcagaaagggcctgagctgaagcaggcttcccgt
cgggatatgtacaccatctgtcaaacagctgggctggatggcctggctaagaagtttggt
ctgacacctgagcagtttggagagaatctccgagacagttaccagcgtcacgagacagag
cagttccctgcagagcccctggagctggccaaggattatgtgtgtagtcagttcccaagc
cctgaagccgtgctggaaggagcccggtacatggtggctttgcagatagccagggagcct
ttggtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttcacca
actaaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttg
aagaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcagag
gaggagacactgctcactatagatatcagcattgacatgaaaggagtggagggttatggt
agtgaccagacatactttgaggaaatcaaacagttctattatcgggacgagttcagccac
caggtgcaagagtggaatcggcagcgtacgatggccattgagcggtccctcaaccaattc
ctctacgtgcagatggctaaagagttgaagaacaagctgttggtggaggccaaggagtac
gtcctcaaggcttgcagccggaaactgtacaactggctaaaagtagcttcataccgtccc
gatcagcaagtggaggaagatgatgatttcatggatgaaaaccaagggaaggggattcgg
gtgctaggcattgcgttttcctcagccagggaccaccccgtgttttgtgcccttgttaat
ggagagggtgaggttacagacttcctccgactgccgcatttcacgaagagaaggaatgcc
tggcgtgaagaagagagggaaaagaaggcccaggatattgaaaccttgaaaaaattcctc
ctgaacaagaagcctcatgtggtgacaattgcaggcgagaacagggatgctcagatgctg
atggaggatgtaaagagaattgttcatgagctggatcaagggcagcagctgtcctctatc
ggagtggagctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgag
aatgagttccgggattacccacctctgctgcgtcaagccgtctcccttgctcgccgcatt
caggaccccctcatagagtttgcccaggtctgcagctccgatgaggatattctctgcctg
aaactccaccctctgcaggagcacgtggtgaaggaggaactgctgaatgcactctactgc
gaattcataaaccgtgtgaacgaggtgggagtggatgtcaatcgggcgattgctcaccct
cacagccaggctttgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctg
ctaaagatcttaaaacaaaacaacacacgtctggagaacaggacccagctggttacgatg
tgtcacatgggacccaaggtgtttatcaactgtgctggcttcatcaaaattgacacggca
tcgctgggcgatagtaccgattcctacatcgaagtcctagatgggtctagggtccatcct
gaaacctatgaatgggcaagaaaaatggcagtggatgccttagaatacgatgagtcggca
gaggacgctaatcccgcaggagctctagaggagatcttggaaaaccccgagcgtctgaaa
gacctggatctcgatgcctttgctgaagaactggaaagacagggctacggtgacaagcat
atcactttatatgacattcgagcagaactaagctgcaggtacaaggacctgagaacccca
taccgttctccaaacacagaagaggtcttcaatatgctgaccaaagaaactccggagact
ttttatataggtaaaatgatcatctgcaacgtgactgggatagcccacaggcggccgcaa
ggagaaagctacgaccaggcaatacggaacgatgaaactggcctttggcagtgtcctttc
tgtcagcaggataactttccagagctcagcgaggtttggaaccactttgacagcggttcc
tgcccgggtcaggccattggagtgaagacacgtctggataatggtgtcgctggcttcatc
ccaacaaaatttcttagtgataaggtggtcaagcggccagaagaaagggtgaaggtggga
atgaccgttcactgcaggattatgaagatcgacattgagaagttcagtgcagacctgacc
tgcaggacctcagacctgatggataagaacaacgagtggaaactgcctaaagacacctac
tacgactttgactctgaggcagcagatcacaaacaggaagaagacctgaaaagaaagcag
cagcggacaacttacatcaagagagtaattgctcacccatcattccacaacattagcttc
aagcaagccgagaagatgatggagaccatggaccaaggggatgtgattattcggccgagt
agcaaaggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccagcac
gtggatgtccgagaagagggcaaggagaatgccttcagcttgggctccacgctttggatt
aacacagaggagtttgaagacctggatgaaattgttgctcgctacgtccagccaatggct
tcttttgccagagacctgttgaatcacaaatactaccaggactgcaacggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacatttattccctac
tttattagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcgaggc
aaaccaaggatagagtatgtgacagtgacgccagaaggattccgctaccggggccaggtc
ttccctaccgtgaatggacttttccgatggtttaaggatcattatcaggaccctgttcca
ggtattacccccagcagtagcagtcggaccaggactccagcctccattaacgctactcca
gctaacattaacctggcagacctgacccgtgcagtgaacgctctaccgcagaacatgacc
tcccagatgttcagtgccatcgctgccgtgacaggccagggacagaacccaaatgccacc
cctgcgcagtgggcatccagtcagtacggctatggaggcagtggaggcggcagcagcgcg
taccatgtcttcacaactccagcacagcaaccggtggccacccctctgatgacccccagt
tactcctacactacccccagccagccgattacaacgccccagtaccagctccaggccaac
accacgccccagtccacccagtcccagacacagtcgcagccatcatccagctccaggcag
aggcagcagccaaagaccaacagtcacgccgcgatcgactgggggaagatggccgagcag
tggctccaggagaaggaggctgaacggaggaaacagaagcagaggttgactcctcgccca
tctcccagccccatgatcgagagcacgcccatgtccatcgctggggacgccacgccgctg
ctggatgagatggatcgatag
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