Gymnogyps californianus (California condor): 127024392
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Entry
127024392 CDS
T08687
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03440
Homologous recombination
gcl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127024392
03460 Fanconi anemia pathway
127024392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127024392
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127024392
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
127024392
FA (Fanconi anemia) pathway
Downstream FA components
127024392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
127024392
NCBI-ProteinID:
XP_050764897
LinkDB
All DBs
Position
20:9480581..9601462
Genome browser
AA seq
1460 aa
AA seq
DB search
MPSDVSEYTIGGVKIIFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQRSLYEKSLLTSSCEKEDRKPETSPPCRCTCHVEPKSNEAATSVNHGASCSFNNYET
GSSVKPGSPLTNTECKENETLASKLSAKKRLSLCDNENDDFQVDRKRIRPLETEQQVRKR
HCFAKGVQLVDALEVYHQRKNGELIIHSEKSVKTTTFSPKTSSGPCTECSCSSGKETDKD
TSNTKKKENGDRSFVPKIFFGTRTHKQISQITRELKRTAYSSVPMTVLSSRDYTCIHPVV
SSSGSNRNEMCVELLEGKHGKSCLYYHGVHKLSEHHALQSAHRMYQAWDIEDLVGLGKKL
RACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDCARESVS
YGVTESQLRAAREELDFMVNNNIRQKDHEALRAVCCSLTNWLQESYSQLVERGYETSCKV
WSGKEMLTTLHKMGITGITFPILQKHLATVLEKEEKISVLGREELIEIPIVSPATQIVLK
GLFMVLFCLFKDNSRYADDYRVALQQTYAWMNENQLDVSDTSAFFTRPKHKRSLRQKTVV
RMLNFWCLNPAVAFSDLSDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHIIRNSQVW
VGTVGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCKTVGQGILCFLPSYKLLDKLKDR
WMHTGLWRNLELAKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSE
GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFSSALESLHAFAIR
NQKSIDCSSECSSEFLHVLSNSKDLSQASQREATICLSPDVPAKSEEQNLISEISFTTTS
SSVNPTASNQPSGQKVDVESHSHHVTQRRKHMDSTPKMAVTKIEREKKNGWTNADIMKEH
CCFKPLTSTPLPVAKNSVSTASSKQKNVNRASELLDSVNQCQSSLISEHKPSVPESCLET
TNFSVKNTEAPVAEEHPDKLQLQVEPRSEFPSAGQKSELSVLNVSAEAEEEDESIYFTPE
LYDDVESEEEKIRPLLPTPNTNENLIECGNSTVADDLFAINTTEILSVTKKMIDDDDGRS
TNLHGIMQNEGSKNNAVNNVEMTSEIEAEQIASQQTDTKKRKINLSRSRNKGLKVQRQCR
RRKATVRQSAYACERKKEAHHQPCKKGLYCIVCGAEILPKAEGILRKACYSNIELKIIWK
LFRNTNIRSKESINNCMCELDAISEDDNMMLIISDAASLSHLKETLKVYQMPVKSEDLNA
SLSLNAIWNEKEYSLTSYLQCRSCVIQSISPCPLIGAEVTHFNNKVQSWVIWLLPSSVHY
CLLLQNPQELKTGNLDYTLS
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgatgtgtcagaatatactattgggggagtgaagatcatattcccttgcaag
gcttacccttcacaacttgctatgatgaatgctattgttaagggcttaaataacaggcaa
cactgtctgttggagagccctacaggaagtggcaaaagcttggcattactttgttctgca
ttatcatggcagcggtctctgtatgaaaaatcactgcttacgtcgtcatgtgaaaaggaa
gacagaaagccagagacctcaccaccatgtcgctgcacgtgtcatgttgagcctaagagc
aacgaggctgcaacaagtgtgaatcatggtgcgtcttgttcttttaataattatgaaaca
ggaagttccgtaaaacccggaagcccgctaacaaacacagaatgtaaagaaaatgaaacg
ctggcttcaaaattgtctgccaaaaaaaggttatctctatgtgacaatgagaatgatgat
tttcaagtagacaggaaaaggattcgtcctttagaaactgagcagcaggttagaaaacgt
cattgttttgcaaaaggagtgcagctagttgatgctttagaagtttatcatcagagaaaa
aatggagagctgattattcactctgaaaaaagtgtgaaaaccactactttttctcccaaa
acatcttctggcccttgcactgagtgttcctgttcttccggaaaagaaactgataaagat
actagtaacacaaagaagaaagaaaatggagatcggtcgttcgttcccaaaatatttttt
ggaacacgaacacacaagcaaatatcccagattaccagagagttgaagagaacagcgtat
tccagtgtccctatgacagttctttctagccgggattatacctgtattcatccagtggtg
tctagtagtggtagtaacaggaacgaaatgtgtgtagaattgctggaaggaaaacatggc
aagtcctgtctttactatcacggtgttcataaactcagtgaacatcatgccctacagtct
gcacataggatgtatcaggcttgggacattgaagatctagtgggcttgggaaagaagctt
cgtgcctgtgcatattttgcagccagagaactcatggtgggcgcagatattgtattttgt
ccttataattatctcctcgacccgcagatacgggaaagcatggaaattaacctaaaaggc
caagtagtcattttagatgaagcccataatattgaggactgtgctcgggagtcagtgagc
tacggtgttacagaaagtcaactaagagctgctcgagaagagctagatttcatggtcaat
aacaacatcagacagaaagatcatgaggccttgcgggctgtgtgctgctctttgacaaac
tggttacaggagagctatagtcaactagtagaaagagggtatgaaacttcctgtaaggtt
tggagtggaaaagaaatgctcaccactttgcacaaaatgggaataactggtattactttt
cccattttacagaaacatcttgccactgtcctggaaaaagaagaaaaaatatcagtgctc
ggtagagaggaacttattgagataccgattgtgagccctgccactcagattgtgctgaag
gggttattcatggttctcttttgtctttttaaagataatagcaggtatgcagatgactac
agagttgctctacaacaaacttacgcttggatgaatgaaaaccaacttgatgtttcagat
acaagtgccttctttacacggcccaagcataaaaggagtttgcggcagaaaaccgtagtc
cgcatgcttaatttttggtgcttgaatcctgctgtggctttttcagacttaagtgatgtt
agaacaattgttctgacatctggtacactctctccaatggattcattttcttcagagctt
ggcgtgaagttttctattcagttggaggcaaatcacattattcggaactcacaggtttgg
gttggcaccgttggagcaggccctaacggtcggaagttgtgtgccacgttccagcataca
gagacctttgagttccaagatgaggtgggagcacttctgctttcagtgtgtaaaacagtt
ggccagggaatcttgtgctttttgccgtcctataagctgttggacaaattaaaagatcgc
tggatgcacactggcttatggagaaacctggagctggctaagacagtcattgcagagcct
caaggaggggcaaagagtgactttgatgaactgctgaaaatatactacgatgcaataaaa
tgtaaaggagaaaaagatggagcactccttatagctgtatgcagaggaaaagttagtgaa
ggcttggatttctgtgatgagaatgcccgtgcagttataaccataggtattccgtttcca
aatgtgaaagacctgcaggttgaattaaagaggaagtacaatgaccagcacaaaaataca
agaggccttttaccagggagtcagtggtatgaaattcaagcttatagggctctgaaccaa
gccctgggaaggtgtataagacataggaatgactggggtgctcttattttagttgatgac
cgcttccggaataaccctaataagtacataactgggttatctaaatggattcgtcaacaa
atccagcaccatgaaaattttagtagtgctcttgaatccttgcatgcatttgctataaga
aaccagaaaagcattgattgttcatcagagtgcagcagtgaatttctccatgtactttca
aattcaaaagacctgtcacaagcctctcaacgggaggcaactatttgtctgtcaccagat
gttcctgctaaaagtgaggagcaaaatttgatttcagaaattagttttactactaccagc
agctcagttaatcctacagcatcaaatcagccaagtggccagaaagttgatgtagagagt
cattctcaccatgtaacacaaagaagaaaacatatggactccacacccaaaatggcagta
actaaaatagagagagaaaaaaagaatggttggactaatgctgatattatgaaagaacat
tgctgctttaaaccactgacttcaacacctttgcctgtagccaagaacagtgtgtccaca
gctagtagcaaacaaaagaatgtgaatagggctagtgaacttcttgatagtgtaaatcaa
tgccagtcatcattaatttcagaacataaaccaagtgtaccagaatcatgtttggaaaca
actaatttttcagttaaaaatactgaagctccagttgctgaagagcatcctgataagcta
cagcttcaagttgagccccgcagtgagtttccttcagcaggacagaaatctgaactttca
gtgttaaatgtatctgcagaagctgaagaagaggatgagagtatctacttcacaccagaa
ctctatgatgatgtagaatcagaggaagagaaaatcagaccactgcttccaacccctaat
acaaatgagaatctgattgaatgtggaaactccacagttgctgacgatctttttgcaatc
aacaccacagaaatactaagcgtgactaaaaaaatgattgatgatgatgatggcagaagc
acaaatttacatggaataatgcaaaatgaggggagtaagaataatgcagttaataatgta
gagatgactagtgaaatagaagcagagcagatagcatctcaacagacggacaccaaaaaa
cggaaaatcaatctttccagatcacgaaataaaggattgaaagttcagagacaatgcaga
cgaagaaaagctacagttaggcaaagtgcctacgcctgtgaaagaaagaaggaagcacac
caccagccttgcaagaaaggactttattgtattgtctgtggagctgaaatactgccaaaa
gcagagggaattttgagaaaagcttgctacagtaatattgaactgaaaataatctggaaa
ctcttcagaaatactaatataagaagtaaagaatccattaataattgtatgtgtgaacta
gatgccatttcagaagatgataatatgatgttgatcatctcagatgctgcaagtcttagt
catcttaaagaaactttgaaggtttatcagatgccagtgaaaagtgaagacttgaatgcc
agtttatctttaaatgctatttggaatgagaaggaatattctctgacaagttacttacaa
tgcaggagctgtgtcattcagtcgatttctccatgtcctttgataggagctgaggttact
catttcaataataaagtacagtcatgggtaatctggctgcttccatcgtctgttcattat
tgcttactgctacagaaccctcaagaactgaaaacaggcaatttagattatactttatct
taa
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