Gymnogyps californianus (California condor): 127024525
Help
Entry
127024525 CDS
T08687
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03030
DNA replication
gcl03420
Nucleotide excision repair
gcl03430
Mismatch repair
gcl03440
Homologous recombination
gcl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127024525
03420 Nucleotide excision repair
127024525
03430 Mismatch repair
127024525
03440 Homologous recombination
127024525
03460 Fanconi anemia pathway
127024525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127024525
03032 DNA replication proteins [BR:
gcl03032
]
127024525
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127024525
Transcription factors [BR:
gcl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127024525
DNA replication proteins [BR:
gcl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127024525
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127024525
MMR (mismatch excision repair)
127024525
DSBR (double strand breaks repair)
HR (homologous recombination)
127024525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
DUF4939
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
127024525
NCBI-ProteinID:
XP_050765080
LinkDB
All DBs
Position
20:6837360..6860209
Genome browser
AA seq
614 aa
AA seq
DB search
MSVRLSEGAIAAIMQGENVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSAQCICQVNRFIVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEG
QGQQRSSAPAANPAPSKAQQQNGSLSVAGPAAPKYHAPSNQFGKASATSSMRTPGGSQAK
VVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFV
SISDLENTPKDSIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGN
EAEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLE
CASISDVRGGPASGVNTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQN
AAFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYREYS
KRLIASIRRNAQLG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggcgccatcgcggcgataatgcagggagagaatgtctcc
aagcccgtgctgcaagtcatcaatacacgggctattgctacaggaaatgggccaccgcgt
taccgagtgttgatgagtgatggggttaacacactctcctcattcatgttggcaacacag
ctgaactctctggtggaagaggaacgcttatcagcccaatgtatttgccaggttaataga
ttcattgtcaacagcttgaaagatggaaggagagtggttatactgatggatttaaatgtt
ctgaaaactgctgataaggttggtgggaatattggcaatccagtgccgtacaatgaaggg
caagggcagcaacgttcttcagctccagctgcaaacccagcacccagcaaagcacagcaa
caaaatggcagtttgtcagtagcaggtcctgctgctccgaagtaccatgctccctcaaac
cagtttggtaaagcgagcgctaccagctcaatgaggacaccagggggatctcaggccaaa
gtagtgccaattgccagcttgaacccgtaccaatccaagtggaccatttgtgctcgtgtt
acccaaaaaggccagattcgcacatggagcaactcccgtggtgaaggaaagctcttttct
atagagctagttgatgaaagcggtgagattagagctactgcattcaatgatcaagcagac
aagttctttccactcattgaattgaacaaggtatattattttaccaaaggcaatttgaag
actgctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgag
acttcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgagtttgta
tccatctctgacttggagaacacacccaaagactcaattgttgatgtaattggaatttgt
aagagctatgaagatgtcactaaaattacagtgaaagctaacaatagggaggtatcaaag
aggaacgtgcatctgatggatacatcagggaaactggtgacagctacgctgtggggaaat
gaggctgaacagtttgatggttctagacaacctgtgatagccatcaaaggagcccgagtc
tctgattttggtggtagaagcctgtctgtcctgtcctcgagtacagttgtcatcaaccct
gatagcccagaggcttttaagctccgaggatggtttgactctgaggggcagcttctggag
tgtgcctcaatctctgatgtgaggggtgggccagcatctggagtgaataccaattggaaa
actttgtttgaagccaaatctgagaacttgggacaaggagataaggcggattattttagc
tgtgtgggcacagtcgtacatctgcgcaaagagaactgtatgtaccaggcatgtccctct
caggattgcaataagaaagtgatagaccaacaaaatggactgtatcgttgtgaaaagtgt
gatcgtgaattccccaacttcaagtaccgcatgatgcttctggtgaccattgcagactgt
ctagagtatcagtgggtgacttgtttccaagagtcagcagaattcattcttgggcaaaac
gcagctttcctgggagaactgaaggaaaagaacgagcaggcatttgaagaagtgttccaa
aatgcaaacttcaacacgtatgagttcaggatccgagtaaaactagagacttacaatgat
gaatctcgtattaaggctacagcagtggacgtcaaacctgtgaactacagagaatacagc
aagaggttgatcgcaagcatcaggagaaatgctcaactagggtga
DBGET
integrated database retrieval system
