Gymnogyps californianus (California condor): 127024675
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Entry
127024675 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin
KO
K16469
rootletin
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gcl03037
]
127024675
Cilium and associated proteins [BR:
gcl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127024675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
ATG16
Motif
Other DBs
NCBI-GeneID:
127024675
NCBI-ProteinID:
XP_050765246
LinkDB
All DBs
Position
21:complement(8035396..8060153)
Genome browser
AA seq
1788 aa
AA seq
DB search
MSSLLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNAISERLEQTLRLETGEREAA
ENRSLAQHNIELRRLLEEEQAAYKRKLQAYQEGQQRQAQLVQKLQAKVLQYKKKCGEVEQ
QLLEKATELEQERLTQPEEESSNELENALIRLEEEQQRSSSLVQVNSMLREQLEQANVAN
AALSEDIRKLTADWARARDELEQREAEWRREEESFNTYFSNEHSRLLTLWRQVVAFRRHF
GEMKAVTERDLSELSHEASRAGRAAHAACLHLAANLRLAESQAGAAREKEAMRLARLEEQ
LAARARDAELEKAALGAKLGELAAALERLRAEDGEKERAVEALTLQLQNLEASRAQEPSP
AEVEALRSEVELLRQTLQDVTQAVLADDPEQPPPPPESPPRPPGSPCRSLSPSAAAAAVH
AALRRRHLQLQASREVAGSLRRELGDSERRLGTLERRLEQLSAEAGGCRRAQDEALCEVA
RLRAEAEVLRRERLRAEEALAGEQQRAGALQQERAQLQRRGEGLEDARDEAARAAEAARQ
QLERSQQQVEELEAQRAGAQRELLEAREALSRAALEAEVARGEREALAEALGKAQGSCGE
LAAAQRAAQAEEARLRDALAKTSELAAGLAREKTELNRTLARLEEERENGRIRMRELGRE
LTLLRGRLERGRRAGAAERQGLERARREAEEGCRGLRAELRVLRGQHLRLRQHLGQAVQE
QSAASEALAQAXGEQERLRGELLRLSRAREGLAKEGASLAVQLAAAQRHGQDRDQEAAGL
RTEKEGLESSIFQLQQRLAQLDARNQQLEAEGRTLLQAKEALEAELGASRLERERELQAR
RQAVEAAEMAAVTAALQSARDAHRDELDHLQREKEELEAERSRLAREQEELAAELAAMRR
QRESEKQQALALQEEERAALAETLRGLQQSLAEATAELEQQRREVTGHQEKEQSLAAELH
SLRAQAEETAAAHEREAKTLREQATAAAKQRDSALREAEEARAQLRLVAEARAAGRRELL
EAQREARESREGREAQRRQAQEARRALGDEAREKEALQRSNEELRAALRRAEGERISLKR
TSEEKEQRLALVEDGRAAADREVMELRATLRELERARLDARRELQELRRQVKDLDSENSK
RSKEVGELQARVALEEQREEESRREAFGLRQKMVESEAGTEAARKELQHLQRRLSEVEGE
FRQREKDLARSLEEARGNEKKLLADARNLQLKVEAARGEAAELSLRLSAAEGRAQGLEAE
LARGEALRRAAETRLGGIQSALRRTMGIGRARACSPGKGGEPEGSGSPGSSPDPDAAAEP
EAVRAALRDFLRELQDAQREREELRVQVGSLGRRLAEVEEERDNAGARAQQLQKLVAESE
EGHRGGGGGELSSAQATLLLQEEMLRRGERERRALREKVTALERSLHAAEGERRAARERM
STVRAGEAELEDAKRRLEAAENRSTRLELQQRVLEGELQRARLALGERQAEARALQDRAE
LLQKQLAESEQRAGALQLAMERLSAALAESGSKDAAPSATALADGTGVHERLLQLQSALA
AGELDRRALQEGLEVARRALAESREEKGALREQLRGLREEQEALQRSKEELEAQVRQQQE
ALRQRQEERGGLQERVGSLQRALARTQGERREAERVALRLEKDKGALKKTLDKVEREKLQ
AQEDWLRLSAEKGRLDRSLGTAERELAEAQHRIQLLQAQVSVLEHPSPPSPGPAPELQRE
LDRLRIAQLQAQRALEARERVHRHRVRGLEEQIALLKGQELHRQPTSI
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctgctgtccctccaggaggagaaccgcatcctgcagcaggaactgtcgcgc
gtcgaggacttgctggctcagagccgggccgagcgcgatgagttggccatcaagtacaac
gccatcagcgagcggctggagcaaaccctgcggctggagacgggcgagcgggaagcggcc
gagaaccggagcctggcgcagcacaacatcgagctgcggcggctgctggaggaagaacaa
gccgcctacaagcgcaagctgcaggcgtaccaggagggccagcagcggcaagcccagctg
gtgcagaagctccaagccaaggtgttgcagtataagaagaaatgcggcgaagtggagcag
cagctgctggagaaggcgacggagctggagcaggagaggctgacgcagccggaggaggag
agcagcaacgagctggagaacgccctgatccggctggaagaggagcagcagaggagcagc
agcctggtgcaggtgaactcgatgctgcgggagcagctggaacaagccaacgtggccaac
gcggcgctgagcgaggacatccgcaagctgacggccgactgggcgcgggcgcgggatgag
ctggagcagcgggaggcggagtggaggcgcgaagaggagtccttcaacacctacttcagc
aacgagcacagccggctcctgaccctctggaggcaggtggtggccttcaggcgtcacttc
ggggagatgaaagccgtcaccgagagggatctgtcggagctgagccacgaggcgtcgcgg
gcgggcagggctgcccacgccgcctgccttcacctggctgccaacctgcggctggccgag
agccaggccggcgccgcgcgggagaaggaggcgatgcggctggcgcggctggaggagcag
ctggcggcgcgggcgagggacgccgagctggagaaagccgccctcggagccaagctgggg
gagctggcggcggccctggagcgcctgcgggctgaggatggggagaaggagcgggcggtg
gaggcgctgaccctgcagctgcaaaacctggaggcctcgcgcgcccaggagccgtcgccg
gcggaggtggaggctttgcgctcggaggtggagctgctgcgtcagacgctgcaagatgtc
acccaggcggtgctggcggacgaccccgagcagccaccaccacccccggagtcccccccg
cgtccccccggctccccttgccgcagcctctcacccagcgccgccgccgccgccgtgcac
gccgccctgcgccgccgccacctccagctgcaggccagccgggaggtggccgggagcctg
cggcgggagctgggggacagcgagaggcggctggggaccctggagcggcggctggagcag
ctcagcgccgaggccgggggctgccggcgggcgcaggatgaggccctctgcgaggtggcc
cgcctgcgcgccgaggccgaggtcctgcgcagggagcggctgcgggcggaggaggcgctg
gcgggggagcagcagcgggcgggcgccctgcagcaggagcgggcgcagctccagcgccgg
ggcgaggggctggaggacgcccgggacgaggccgcccgcgccgccgaggccgcccgccag
cagctggagcgcagccagcagcaggtggaggagctggaggcgcagcgggccggggcgcag
cgggagctgctggaggcgcgggaggccctgagccgggcggcgctggaggccgaggtggca
cggggcgagcgggaggcgctggccgaggcgctgggcaaggcgcaggggagctgcggggag
ctggcagcggcgcagcgggcagcgcaggcagaggaggcccggctgcgggacgccctggcc
aagacgagcgagctggcagccgggctggcgcgggagaagacggagctgaaccgaaccctg
gcccggctggaagaggagcgggaaaacggccggatccggatgcgggagctggggcgggag
ctgacgctgctgcgggggcggctggaacgggggcgacgggccggggcggccgagcggcag
gggctggagcgggcgcggagggaggccgaggagggctgccgggggctgcgggcagagctg
cgggtgctgcggggccagcacctgcgcctgcgccagcacctggggcaggcggtgcaggag
cagagcgcggcgagcgaggcgctggcgcaggcgncgggggagcaggagcggctgcggggg
gagctgctgcggctcagccgggcccgcgaggggctggccaaggagggggccagcctggcc
gtccagctcgccgccgcccagcgccacggtcaggatcgggaccaggaggcggccgggctc
aggacggagaaggaggggttggagagcagcatcttccagctgcagcagcggctggcccag
ctcgacgcccgcaaccagcagctggaggctgagggccggaccctgctccaggccaaggag
gcgctggaggcggagctgggtgcctcgcggctggagcgggagcgggagctgcaggcccgg
cggcaggcggtggaggcggccgagatggcggcggtgacggcggccctgcagagtgcccgc
gatgcgcaccgggacgagctcgaccacctccagcgcgagaaggaggagctggaggctgag
cggagccggctggcgcgagagcaggaggagctggcggccgagctggcggcgatgcggcgg
cagcgtgagagcgagaagcagcaggcgctggcgctgcaggaggaggagcgggcagcgctg
gcggagacgctgcgggggctgcagcagagcctggccgaggccacggccgagcttgagcag
cagcggcgagaggtcaccggccaccaagagaaggagcagagcctggccgcagagctgcac
agcctacgggcgcaggcggaggagacggcggcggcccacgagcgggaggcgaagactctc
cgtgagcaagcgacggcggcggccaagcagcgggacagtgccctgcgggaggcggaggag
gcgcgggcgcagctgcggctggtggcggaggcacgggcggcggggcggcgggagctgctg
gaggcgcaacgggaagcccgggagagccgggaaggtcgggaagcacagcggcggcaggcg
caggaggcacgccgggctttgggagacgaggcgagggagaaggaggccctgcagcgttcc
aacgaggagctgcgggcggcactgcggcgcgccgagggcgagcgcatcagcctgaagcgc
accagcgaggagaaggagcagcggctggcgctggtggaggacgggcgggcggcggcagac
cgggaggtgatggagctgcgggcaaccctgcgggagctggagcgcgcccgcctcgacgcc
cgccgcgagctgcaggagctgcgccggcaggtgaaggacctggacagcgagaacagcaag
aggagcaaggaggtgggcgagctgcaggcgcgcgtggccctggaggagcagcgggaggag
gagagccgccgcgaagccttcggcctcaggcagaagatggtggagagcgaggccggcacg
gaggccgccaggaaggagctccagcacctgcagcggcggctgtcggaggtggagggcgaa
tttcggcagcgggagaaggacctggcccgcagcttggaggaggctcgcggcaacgagaag
aagctgctggccgatgcccgcaacctgcagctgaaggtggaggcggcgcggggcgaagcg
gccgagctgagcctgcgcctgagcgcggccgagggtcgggcgcaggggctggaagccgag
ctggcccgcggcgaggcgctgcgccgggctgccgaaacccgcctgggaggcatccagtcc
gccctacgccgtaccatgggcatcggccgggcacgggcctgctccccgggcaagggtggg
gaaccggagggatcggggagccccggctcatccccggatcccgatgcggccgctgagccc
gaggcggtgcgggcagccctgcgggatttcctgcgtgagctgcaggatgcgcagcgggag
cgggaagagctgcgggtgcaagtgggcagcctgggccggcggctggcagaggtggaggag
gagcgggacaatgccggtgcccgggcgcagcagctccagaagctggtggctgagagcgag
gaagggcatcgcggcggcggcggcggggagctgagcagcgcccaggccacgctgctgctg
caggaggagatgctgcggcggggcgagcgggaacgacgggcgctgcgggagaaggtgacg
gcgctggaacggagcctgcacgccgccgagggtgaacgccgagccgctcgggagaggatg
agcacggtgcgagccggcgaggccgagctggaggatgctaagcggcggctggaggcggcg
gagaaccggagcacccgcttggagctgcagcagcgggtgctggagggcgagctgcagcgg
gcacggctggccctgggcgagcggcaagcggaggcgcgggcgctgcaagaccgcgccgag
ctcctccagaaacagctagcggagagcgagcagcgcgccggcgctctgcagctggcgatg
gagcggttgagcgcggcgttggcggagagcggctcgaaggacgccgcgccgagcgcgacg
gccttggccgatggcaccggggtccacgagcggctgctgcagctccaaagcgccctggct
gccggcgagctcgaccgccgggccctgcaggaggggctggaggtggcgcggcgggcgctg
gcggagtcacgggaggagaagggagcgctgcgggagcagctgcgggggctgcgggaggag
caggaggccctgcagcggagcaaggaggagctggaggcgcaggtccggcagcagcaggag
gcgctgcggcagcggcaggaggagcgtggggggctgcaggagcgggtgggcagcttgcag
cgcgccctggcccgcacgcagggcgagaggcgagaggccgagcgcgtcgccctgcgcctc
gagaaggacaagggcgccctgaagaagaccctggacaaggtggagcgggagaagctgcag
gcgcaggaggactggctgcggctctcggcggagaagggccggctggatcgctcgctgggc
acggccgagcgggagctggcggaggcgcagcaccgcatccagctgctgcaggcgcaggtg
tcggtactggagcacccatctccgccgagccccgggccggcgccggagctgcagcgggaa
ctggaccgcctgcgcatcgcccagctccaagcccagcgggcgctggaggctcgcgagcgc
gtccaccgtcaccgcgtccgcggcctggaggagcagatcgcgctgctgaaggggcaggag
ctccaccgtcagcccaccagcatctag
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integrated database retrieval system
