Gymnogyps californianus (California condor): 127024883
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Entry
127024883 CDS
T08687
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gcl03036
]
127024883
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127024883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
127024883
NCBI-ProteinID:
XP_050765577
LinkDB
All DBs
Position
21:599069..630073
Genome browser
AA seq
1883 aa
AA seq
DB search
MSDNEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNEDGGLKEPKSS
AQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWRE
FSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQSALPTVIRKAKTKEGKGPGVRK
KIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSE
CSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEL
EKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEGGEEEEEDDHMEFCRVCKDGGELLCCDTC
PSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAPLPPVLPAPDA
ELALAPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPA
FDYGSGDEDSQREKRKSKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIK
WKDLPYDQCTWEIDEIDIPYYENLKHLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEK
PPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTV
QTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIREN
EFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLK
NNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK
EDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNS
KGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKML
KKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQ
FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRAS
VEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQ
RIAMPDAVTPFSDTLSTKGGAVTPGLKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDR
NQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHY
EQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPE
GGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSH
WLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLV
RKKVQEFEHVNGKYSTPDLILEGPESKKSSEIVSSDPNTPIPASPAHMHAGPVALADKIE
TQLGFQEEKDQAEQKSRKVSDSQVPASAEKVESEEHPESCDSKEKPREEKQEESEKAEPS
PEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKEVKPEDAKAEEKEQSEAQQNGDKEEEED
GKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRHDYWLLAGIVTH
GYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAY
LNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDM
KADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAVQQGSFGSSQMYNNNFGPNF
RGPGPGGIVNYSQMPLGPYVTDI
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaacgaagaggagatcgaggagaaatctgagagtgaagggagtgactattcc
cccaacaaaaagaagaagaaaaaactgaaggacaagaaggagaaaaagccaaaacggaag
aagaaggatgaagaggaggatgacaacgaggacggaggtctaaaggagcccaagagctca
gcccagctgatggaagaatggggcctcgatgacgtagattacgttttctcagaagaagat
tatcatactctgactaattacaaggctttcagccagttcctcaggcctctgatcgccaag
aagaaccccaagatccccatgtccaagatgatgaccgtgctcggtgccaagtggcgcgag
ttcagtgccaacaacccgttcaagggcagctcggcggcagcggcagcggcggccgttgct
gcagctgtggagaccgtcaccgtcgccccgccgctcgccgccagcccccagcagtctgcc
ttgcccaccgtcatcaggaaggctaagaccaaggagggcaagggtccaggcgtgcggaag
aaaatcaagggctccaaagacgggaagaaaaaagggaaggggaaaaagatggcaggcttg
aaattccggtttggaggaatccccagcaaaaggaaaaagggctcctctagcgaagaggag
gaacgggaggaatccgacttcgacagtgccagcatcaacagctcctcagtgcgctccgag
tgctcggctggcctggggaagagagggaagaggaggagaaagaaaaagaggatcgaagaa
ggggacgggtacgagacggaccaccaggactactgcgaggtgtgccagcagggaggggag
atcatcctgtgcgacacctgtcctcgcgcctaccacctcgtctgcctcgaccccgagctg
gagaaggcccccgagggcaagtggagctgcccccactgcgagaaggagggcatccagtgg
gagccgaaggaggaggaggaggaggaagaggaaggcggcgaggaggaggaggaggatgac
cacatggagttctgccgagtctgtaaggacggaggggagctgctgtgctgcgacacctgc
ccgtcctcctaccacctccactgcctgaacccgccgctgccagaaataccaaacggtgaa
tggctctgccctcgctgtacatgccctcccttgaagggcaaagtccaacgcatcctgcac
tgggcctggaaagagccgccggccgccccgctcccgcccgtgctgccggccccggacgcg
gagctggctctcgccccgccaaaggtgctggaggggatcccggagcgcgagttcttcgtg
aagtgggcaggcctctcctactggcactgctcctgggtcaaggagctgcagctggagctc
taccacaccgtgatgtaccgcaactaccaacggaagaacgacatggatgagccgccggcc
ttcgactacggctctggggacgaggacagccagagggagaagcggaagagcaaagacccg
cagtacgccaagatggaggagcggttctaccgctacggcatcaagcccgagtggatgatg
atccaccgcatcctgaaccacagctttgataaaaaaggagacatccattacctgatcaag
tggaaagacctgccgtatgaccagtgcacctgggagatcgacgagatagacatcccgtac
tacgaaaacctcaaacacctctactggaaccacagggagctgatgctgggggaggacacg
cgccctctgaagaagctgaacaagaaagggaaaaagctgaaagaggagaagctggaaaag
cctccagaaacgcctctcgtggatcctacggtgaagtttgacaagcagccgtggtacatc
gacgccacgggaggcacgctccatccttaccagctggaaggcctaaactggctgagattt
tcctgggcccaagggacggatacaatcctggccgacgagatggggctggggaagactgtg
cagactattgtgttcttgtattccctgtacaaggagggccactcgaaagggccgtatctg
gtcagcgcccctctctccaccatcatcaactgggagcgcgagtttgagatgtgggcaccc
gacttctacgtcgtgacctacacgggggacaaagaaagccggtcggtcatccgggaaaat
gagttttcttttgaagacaacgccatccggagcggaaagaaggtcttccggatgaagaag
gaagcccagatcaagttccatgtcctgctcacctcctatgagctgatcactattgaccag
gcggtgctgggctccatagagtgggcctgtctggtggtggatgaagcgcacaggctgaag
aacaaccagtccaaattctttagagtattaaatagctacaagatcgattacaagctgctg
ctcaccgggactccgctccagaacaacttggaagagctcttccacctgctcaatttcctg
actcccgagaggtttaataacctggaggggttcctggaggagtttgcagacatctccaag
gaggaccagatcaaaaagctccatgatctgctgggtccccacatgctgcggcggctcaag
gcggacgtgttcaagaacatgccggccaagaccgagctgatcgtcagagtggagctgagc
cagatgcagaagaagtactacaagttcatactgacgaggaattttgaagccctgaattcg
aaaggtggtgggaaccaggtctcgctgctcaacatcatgatggacctgaagaagtgctgt
aatcacccctacctctttcctgtggcggcggtggaggccccggtgctgcccaatggatcc
tacgacgggaattctttggtcaaatcttctgggaaactgatgctgctccaaaagatgctg
aagaagttacgggatgggggtcacagagttctgatcttctcccagatgacgaagatgctg
gacttgctggaggatttcctggagtacgaaggctacaagtacgagcggatagacgggggc
atcaccggcggcctgcgccaggaggccatagacaggtttaacgctcctggtgctcagcag
ttctgctttctcctctctacccgcgccggcggtctgggcataaaccttgctacggccgac
acagtcattatttatgattctgactggaatccccacaatgacatccaggcgttcagcaga
gctcaccgcatcgggcagaacaagaaggtgatgatctaccgctttgtgaccagagcctcc
gtcgaagagcgcatcacccaggtggccaaaaggaagatgatgctcacccacttggtggtc
cgcccggggctcggctccaagtcgggctccatgaccaagcaagagctggatgacatcctc
aagtttgggacagaagagctcttcaaggatgatgtggaaggcatggtgtctcagggacag
cggatcgccatgccggatgctgtcaccccgttctctgacacgctgtcaaccaaagggggt
gcggtgactcccggcctgaaaaaaaagcacggtggcaccccgccaggtgacaataaggac
gtggatgacagcagcgtgatccactacgacgacgctgccatctctaagcttctggaccga
aaccaggacgcgactgatgacacggagctgcagaacatgaacgagtatctcagctccttt
aaagtggcccagtatgttgtgagagaagaggacggtgtggaggaggtggagcgtgagatc
atcaagcaagaggagaatgtggaccccgactactgggagaagctgctgcggcaccactat
gagcagcagcaggaagatctggccaggaacttggggaaagggaagagaatccgcaagcag
gtcaactacaacgacgcctcgcaggaggaccaagagtggcaggacgagctctccgacaac
cagtcggagtactccattggctccgaggacgaggatgaagactttgaagagaggccagaa
ggtggcagaagacaatcccggagacagctgaagagcgaccgggacaagcctctccctcct
ttgctggcaagagttggggggaatatcgaggttctcggcttcaacgcccgccagcgcaag
gctttcctgaacgctatcatgcgctggggcatgccgccccaggacgccttcaactctcac
tggctggtccgggatctgcgagggaagagtgagaaggagttcagggcgtacgtctctctc
ttcatgagacatttgtgcgaacctggggcagacggtgccgaaacctttgcggacggtgtt
ccccgggaagggctgtcacgccagcacgtgctgactcggataggagtcatgtcactagta
aggaagaaggtccaggagttcgagcatgtcaatgggaagtacagcaccccagatctgatt
ctcgagggcccggagagcaagaagtccagcgagatcgtgtcttcagaccccaacaccccc
atcccggccagcccggcgcatatgcacgcgggacctgtggcccttgcggacaaaatagaa
acacagctcgggttccaggaggagaaggaccaagcggagcagaagtccaggaaggtgtct
gacagccaggtgcctgcgagtgccgagaaggtggaaagcgaagagcacccagaaagctgc
gacagcaaggagaaaccgagggaagagaagcaagaggagagtgaaaaggctgagccttct
cccgagcccctggtgaaagatgaggggattcaagagaaagagaagcctttggagaagccg
gagttgaacagcagcccagggaaaggggaggacaaagaagtcaaaccagaggacgccaag
gcggaggagaaggagcaaagcgaggctcagcaaaacggtgacaaagaggaagaggaggat
ggaaagaaggatgacagaaacatgaacttccgattcatgttcaacattgccgacggtggc
ttcacagagctgcacacgctgtggcagaacgaggaaagggctgccatctcctccggcaag
atctacgacatctggcaccgccgacacgactactggctgttggcaggaattgtcactcac
ggctacgcccgctggcaggacatccagaacgacccgcgctacgtgatcctgaatgagccg
ttcaagtcggagatacataaggggaactacctcgagatgaagaacaagttcctcgcccgg
cggttcaagttgctggagcaggccctggtgatcgaggagcagctgcggagggctgcgtac
ctcaacatgacccaagaccccagtcacccggccatggcattgaacgcccgtctggctgaa
gtggagtgccttgccgagagccaccagcatctctccaaagagtccctggctgggaacaag
cccgcgaacgccgtcctgcacaaggtgctgaaccagctcgaggagctgctgagcgacatg
aaggccgacgtgacgcgcctgccctccatgctgtcccgcatcccgcccgtggccgcccgg
ctgcagatgtccgagcggagcatcctcagccgcctggccacccgcgggggggaccccgcc
gtccagcagggatccttcggctcctcccagatgtacaacaacaacttcgggccaaatttc
cgaggtcccgggccgggcgggattgtcaactacagtcagatgcctctgggaccgtacgtg
accgatatttag
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integrated database retrieval system
