Gymnogyps californianus (California condor): 127024944
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Entry
127024944 CDS
T08687
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03013
Nucleocytoplasmic transport
gcl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127024944
03015 mRNA surveillance pathway
127024944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127024944
03041 Spliceosome [BR:
gcl03041
]
127024944
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127024944
Spliceosome [BR:
gcl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127024944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
127024944
NCBI-ProteinID:
XP_050765648
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Position
22:complement(4684818..4703634)
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AA seq
893 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DVPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQR
RYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAKRRSPSISSKHRK
GSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSPSTRPIR
RVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPTRSRSPSANWSPA
KKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAAAVA
VADITSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagctgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagagataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtccaagaagacgcaaatcaaggtctccttcc
cctcgaaggaggtcatcacctgtcagaagagagcggaaacgcagccattctcgctcccct
catcacagaaccaagagccgtagtgctactcctgcaccagaaaagaaagaggcgactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatgtcccaaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaactcaaagaaggagagagagaaggaaaaagagaagactcgtcaaaggtcccca
actcggtccaagtcaaggtcaagatctcgatcacgttctccatctcattctcgaccaaga
aggcgtcatagatcacggtcaaggtcttactcccctagaaggcgaccaagcccaagacga
cggccatctccaaggagaaggagccctccaaggcgaatgcctcccccacccagacacaga
agaagcagatcccctgtgaggcggagaagacggtcatcagcatccttatctggcagtagc
tcttcttcctcctcctcgcgttcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgtaaaacgcgtaggctctctccttccgcaagccctcctaggcggagg
cacaggccatccccaccagcaagtccacctccaaaaccacgcaggtctccaacaccccag
cagtcaaatcgtgcaagaaaaagccgtggctctgtttcgcctagcagagcatcagcaccc
aaacataagagtactgaaaaaagagaatctccttcgccagcaccaaaaccaaggaaagca
gaactgtctgaatcagaagaagataaaggaggtaaaatggctgcagcagactctgttcaa
cagaggcgtcagtacagaaggcaaaatcaacagtcttcatctgattctggttcttcatct
tcatctgaagaggaaagacctaaaagatccaatgtgaagaatggggaagttggtagacgc
cgacgccattcacattcacgcagtccttcaccgtctccacgaaaacgacagaaggaatcc
tcccctcgtaggaggaggagaagtccgtcacccccaccagccaggcggcgacgctctcct
tcacctgcccctcctcctaggcggcggcggtcaccttcattacctcgtcgaaggtctcca
tcaccacccccacgcagacgctcaccttctccacggagatactctccgccgatacagaga
cgatattctccttctccaccacctaagagaagaacggcttctcctcctcccccgcctaaa
cgaagggcatcgccttctccacagtcgaaacgcagagtctcccattcaccaccgccaaaa
caaaggagctcgccaactgctaaaaggcgttcaccttcgatatcttccaagcacaggaag
ggatctcctcccagtaggtccaatcgggaaacacgttctccaccacagaacaaaaggcat
tcaccttcaccacggcctagagcttctcatacctctgcaagcccaccaccaccgcgaagg
ggagcttcagcttcaccccagagaagacagtctccatctccaagcactagacccatcagg
agggtgtcaagaacgccagaacctaagaagacaaaggcttccacgccaagtccacgatct
gcgagacgggtgtcttcatcacggtctgcatcaggatcacccgagccagcgccgaaaaaa
catcaaggacctccatctcctactcggtctcgttctccttctgcaaactggtcacctgca
aaaaaggctaaaagcccaactcagagcccatcacctgcaaggaattcagatcaagaaggg
ggtggaaagaagaagaagaaaaagaaggataagaagcataaaaaggataaaaagcacaag
aaacacaaaaaacataagaaggagaaggctgcagcggctgcagcagctgctgctgtggct
gtggcagatatcacctcagcacaggaagaccaggaagcagagacagaacccaaaaaggag
accgaaagcgaaccagaagacaaccttgatgatctagaaaaacacctgcgagagaaggca
ctgaggtcaatgaggaaggcgcaagtgtcaccaccatcctag
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