Gymnogyps californianus (California condor): 127025161
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Entry
127025161 CDS
T08687
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127025161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127025161
Membrane trafficking [BR:
gcl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127025161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
127025161
NCBI-ProteinID:
XP_050765958
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Position
1:69366746..69400877
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AA seq
863 aa
AA seq
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MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYIGTNDCFIYHFLLDEKISTAGKI
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMMNLEPVPTGARIKGAVT
FALNENPVSGDPFCVEVCIISVKRRTIQVFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYEYIVDFLTFCSDQDL
VWKYSEWVLQKNEEVGVQIFTKRPLEEQEKSNINPDDIISCLNKYPKARVKYLEHLVLER
KIEKEKYHTHLAVLYLEAILQLKSVTTDNCTETTELLFKLRSLLQKSDLYRIHFILDKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCVWNSENRDMQYRRRLFHMLLS
VYLNPGTSDCALVVAAVDLLNNHAAEFDAALVLQVVPDSWSVQLLSPFLSGAVRQSIHTK
RMTQTALGLAQAENLIYKHEKVKQKGTPILLSDKKVCQVCQNPFCEPVFVRYPNGGMVHT
HCAANRHLNSKMTHHSSSSSSQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaagctttcaagctcgtttctgctgttgaacgggagatgttaatgggagac
aaaaattacatcaacatcgaatgcattgagtgttgcggaaagaacctctatattggaacc
aatgactgctttatctatcactttctgttggatgaaaagatatcaacagctggaaaaata
acttttgctgccaccaagcaactgcataaatacctggggttaaagaagcctgtgagtgag
ttgaaagcagcctctgccctcaccaggcttcttgtgctttgcgacaacacgataacacta
gttaacatgatgaacttggaacctgtccccactggtgctagaatcaaaggagctgtgaca
ttcgcattaaatgaaaaccctgtgagtggggatcctttctgtgtcgaagtctgcattatc
tcggtcaagcggcggaccattcaagtgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactccagagcaaccctgtgctgtggctgtagatggttattacttatgt
cttgcacttactacacagtatatcattttgaattataatactggcgtctcccaggatctg
tttccttattgcagtgatgagaaacggccaattgtgaaaaggataggcagacaagagttt
ctgttggctggccccggaggcctaggcatgtttgcaactgtagatggcatttcacagcgt
gcccctgtgcactggtcagagaacgtgattggagcagctttgtgctttccttacgtggtt
gctctcgatgatgagttcattacagtgcacagcatgctggaccagcagcaaaagcaaacc
ctgccttttaaagaaggtcacattctacaggactttgaaggaaaggtcattgttgctact
aataagggtgtgtatatcttggtgccactacctttggaaaaacagattcaggatcttcta
gctagccacagagtggaagaagcccttgttctagcaaaaggagctcgaaggaatattccg
aaagagaaatttcaggtaatgtacaaacgaatcctgcagcaagcaggtttcatacagttt
gcacagcttcagttccttgaagcaaaagaactcttcagaagcggccagcttgatgtccgg
gagctgatctctctctaccccttcctgttgcctacttcctcttcatttatacggtctcat
cctcctctgcatgagtacgcggacctaaaccagctgacccagggggaccaggagaagatg
acaaaatgcaaacgattcctcatgagttacttgaatgaagtccgcagcactgaggttgca
aatggctacaaggaagatattgacacagctttactcaagctatatgcagaggcaaatcat
gaaagcctgctggatctgctagtttcggagaatttttgtcttttaacagatagtgctgcc
tggctggaaaaacacaaaaagtattttgcccttggtctcctgtatcactacaatggtcag
gatgctgcagcacttcagttatgggtgaaaatagtcgatggagacattcaagattctaca
cgttcagatctctatgaatatatagtagacttccttacattctgctcagaccaagatcta
gtgtggaaatactctgaatgggttttacaaaaaaatgaagaggttggcgtacagattttc
actaaaaggcctttggaagaacaggagaaaagcaacattaatccagatgatatcatcagt
tgccttaacaaatatcctaaagcacgtgttaaatatctagaacatctagtactggaaaga
aaaatagagaaagaaaagtaccatactcatctagctgtcttgtacttggaggcaatactt
cagctaaaatctgtgaccacagataactgtacagaaacaactgaactgctgtttaaacta
cgcagtcttcttcagaaatctgatctttatagaattcactttattttggacaaaatccag
ggcacagaccttcatatggaaagtgcaattttatatggaaaactagaagaacatgagaag
gctttgcatatccttgtccacgagttgaaggacttccatgctgctgaagaatactgtgta
tggaactcggagaacagagacatgcagtacagacggaggcttttccatatgctgctgtca
gtgtatctaaatccaggcacttcggattgtgcattagtcgtggctgctgtggatctcttg
aataaccacgctgctgaatttgatgcggctctggttttgcaggtggtgcctgacagctgg
tcagtgcagctcctctccccgttcctgtctggagcagtgaggcaaagcattcatacaaaa
agaatgactcagacagcacttgggttagcacaagctgaaaacttaatctacaaacacgag
aaggttaaacaaaaaggaaccccaattcttctttcggacaaaaaggtctgtcaggtgtgc
caaaatcctttctgcgagcctgtatttgtaagatacccaaatgggggtatggtccacaca
cactgtgctgcaaacagacatctgaattcaaagatgactcatcactcttccagctccagc
agtcagacttga
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