Gymnogyps californianus (California condor): 127025781
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Entry
127025781 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule-related/down-regulated by oncogenes
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127025781
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GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
Tissue_fac
DUF7042
DUF7359
Motif
Other DBs
NCBI-GeneID:
127025781
NCBI-ProteinID:
XP_050766826
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Position
25:7853504..7889378
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AA seq
1258 aa
AA seq
DB search
MHPDPGRLQALLFIAAAGLVSATSSDLTPRFISEPSSAVQKSGGPVQLRCSAEPSTARLS
WLFNGEPLDSRVGEVEIQSGSLTIVSLSLLTSGRYQCVANSSVGAVVSRPATVSMGSLAN
FDTSVKPAVAAEEGGTAFIGCKVPESNPKAQVRFQVRGKWLEQSTDNYLILPSGNLQILN
VSLEDKGSYKCAVYNPVTHDLRIELTGRKLIVTRSSSGGFHILHPLAPQSLAVPRHSSLM
LECVVSGLPPASVRWVRDGRDALRKGRWKLLHSHLVTDRLEASDSGNYSCVVGNESGVVK
YVNYSLTILEPASISKGLQDETVAAGATAHFWCDVRGSPAPTLTWLHNAAPLRLSPRHLP
AGNRLRIRGVTQEDSGLYQCVANNGVGFVQSTGRLRVQLGEGSRPVIVSPPASITVIDGG
DITLSCNAXGLPVPLIRWYDSRGLVTGRPSQVLHSKPQKPPRATPGSAVAEPTYFSISQA
GSSSLHIRNVTPERAGEYTCEAINEHGSVVSRAFLTVAPLATGTKAAEMAPVEIAQSDES
DGDFGAGAAFSSSPPTKLRSDAAATEKAPNAAAPPEAPIILSPPQTLKPDMYNLVWRSGR
DGGLPINAYFVKYRKLDDSVSAVGSWHTVRVPGSENELRLTELEPSSLYEVLMVARSAAG
EGQPAMLTFRTSKERTSSSKNTQAPSPPVGIPKHPIVHEGTSNFGVVLPDLSRHSGVPEA
PDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRNSDWLIAADNISPSKLSVEV
RNLEPGEMYRFRVIAVNNYGESPRSAASRPYQVAGFTSRFSNRPITGPHIAYTEAISDTQ
IMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDI
KMQCYNEGGESEYSNVMICETKVKRTPGASEYPVKDLSTPPNPPDRVGGSGAGPSNGPVR
SSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMQKYDPPGYLCQGADINGQMIEYT
TLPGTSRVNGSIHGNFISNGGLSNGCPHVHHKVANGVNGIMNGGAGLYPGHTNSLSRTHM
DYEHPHHLVNGGGMYTAVPQAEPSECISCRNCRNNNRCFTKTNGTFSGGGALPVVPIVAP
YQQDGLEMKPLNRHVMVAMCLASAVPECGTRLEEDGKEKAEQPSAQHPCCREGMNRLSVD
YTDGDNCVHLETSNHLLSWSPLILQPVSKDCKEKPGWSSSSLTLNGSGDLRQPQLQET
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagaccctggacgcttacaggcactgctcttcatcgctgccgcgggtctcgtc
tctgccacgagttcagatttaactccccgttttatttctgagccctcgtctgctgtccag
aagtctggtgggcccgtacaactccgctgctctgccgagccctccacggctcgcctttct
tggctgtttaatggggaacctctggacagcagggtgggagaagtggaaatccagtcagga
tctttgacaatcgtctccctcagcctgttaacgtctggtcgctatcagtgcgttgctaac
agcagcgtgggtgctgttgtgagcaggcctgcaacggtatcgatgggcagtttggctaat
tttgatacgtcggtgaaacctgctgttgcagcagaggaaggaggtacggctttcattgga
tgcaaggtgccagaaagtaatcctaaagcacaggttcgctttcaagtgcggggaaaatgg
ctggaacaatcaacagacaactacctaattcttccatctggaaacctgcagattttgaat
gtatctttagaagacaaaggatcctataaatgtgcagtgtacaacccagttactcacgat
ctgagaatagaactcactggacgtaagctcatagtcacacgctcttcctcaggtggcttc
cacatacttcatcccctggcaccccagagcctggcggtgccccggcacagctctctgatg
ctagaatgtgttgtcagtgggttgcctccggcctccgtccgctgggtaagagacggccgg
gacgcgctgaggaaaggcaggtggaaactgctgcactcccatctggtgacggacaggctt
gaggcatcagactctggaaattactcctgcgtggtgggaaatgaatctggagtagtgaaa
tacgttaactattcgcttactatacttgaacctgcctcaatctccaagggactgcaagat
gaaacggtggccgctggagcgactgcgcatttctggtgcgatgtccgcggaagccctgcg
ccgaccctcacctggctccacaacgcggctcccctccgcctctctccacggcatctgccg
gcgggaaaccgcctgcggatccgcggcgtcacccaagaggactctggcttgtaccagtgc
gtagcaaacaatggggtcggatttgtgcagtccactgggagacttcgtgtccagctgggc
gaaggctctaggccagttatagtctcgcctcctgcaagcatcactgtgatagatggtggg
gacattacgctgtcttgcaatgccnacggcctgcccgttcccctgatccgttggtacgac
agcagaggacttgtgaccggccgcccttcccaggtgcttcattcaaaaccgcagaaacct
cctcgagcaacgccgggcagcgccgttgcagagcccacctacttctccatctctcaagcg
ggctcgagctccttgcacattaggaacgtgactcccgagcgtgccggggagtacacgtgc
gaagccatcaacgagcacggctccgtggtgtcgagagccttccttacagttgctccttta
gcaactggcacgaaagcagcagaaatggctcccgtggagattgcccagagcgatgaaagc
gacggtgactttggcgcaggagcggcgttctcaagctcgcctccgacaaaattgcgctcg
gatgcagctgcgacggaaaaagccccgaatgccgccgctccccccgaagcccccatcatc
ctcagccccccgcagacgctgaaaccagacatgtacaacctggtgtggcgttcggggagg
gacgggggcttgcccatcaacgcctattttgtgaaataccgcaagctggacgacagcgtc
agcgcagtgggaagctggcacacggtgcgtgtccctggcagtgagaacgagctgcggctc
accgagctggagccttccagcctgtatgaagttttaatggtggcgaggagtgctgctggt
gaaggccagcctgctatgctgacatttcgcaccagcaaagaaagaacatcatcctcgaaa
aacactcaggctccatctccaccagtaggcattcctaaacaccccattgttcatgaaggg
acaagtaatttcggtgtcgtccttccagacctgtcgcgacacagtggagttccagaagct
cccgaccgacccacgatctccacagcatcagagtcatccgtctacgtcacgtggatacca
cgagcgaacggtggctcccccattactgcctttaaagtggagtataaacgcctgggtcga
aacagtgactggctaattgcagctgataacatttctccttccaagctgtctgtggaagtt
cgtaacttggagccaggagaaatgtataggttccgtgtgattgctgtgaacaattatggg
gagagcccacgcagcgcagcatctcgcccttaccaagtagccggatttaccagtcggttt
tccaaccgccctatcacaggacctcacatagcttacaccgaagccatcagtgacactcag
atcatgttaaaatggacgtatattacatcaagcaacaacaacactcccatccaaggtttt
tatatctattatcggcctacggacagtgacaatgacagtgactacaagagggatatcgtg
gaaggtacgaagcaatggcacttgataaatcacctgcagccagaaacatcttacgacatt
aaaatgcagtgctataacgaaggtggtgaaagcgagtacagcaacgtgatgatctgcgaa
accaaagtgaaacgcacgccgggagcatccgaatatccagtgaaagacctgagcacgcca
ccgaatccccctgaccgggttgggggaagcggagctgggccttcaaacggccccgttcgg
agcagtgacatgctgtacttgatcgtgggctgcgtccttggggtgatggtccttatcctc
atcgttttcattgccatgtgcctgtggaagaaccgccagcaaaacgccatgcagaaatat
gacccccctggctatctctgtcaaggggcggatatcaacgggcaaatgattgagtacacg
accttacccggcacaagccgagtcaacggcagcatccacggcaacttcataagcaacggc
ggcctcagcaacggctgtccccatgtccatcataaagttgctaatggagttaatgggatc
atgaatggaggagctggactgtacccagggcacaccaactccctgtccaggacgcacatg
gactatgaacatccccatcatcttgtgaacggcggtgggatgtacacagcagtgccgcag
gccgagccctcggagtgcatcagttgccgaaattgtcggaacaataacagatgtttcacc
aaaaccaacggcacgttcagcggcggcggcgcgctacccgtcgtgcccatcgtagcacct
tatcagcaggacggtttggagatgaaaccgctgaatcgccacgtcatggtggccatgtgc
ttggcctccgccgtcccggagtgcggcacccggctggaggaggacggcaaggagaaagcg
gagcagccctccgcccagcatccctgctgtcgagaaggcatgaaccgcctctccgtggat
tacacggacggtgacaactgcgtgcacttggaaacgtcgaaccaccttttgagctggagt
ccccttattctgcagcctgtttcgaaggactgtaaggaaaaaccgggatggagttcatcc
agcctcaccttaaacggttctggggaccttcggcagccccagctgcaggagacctga
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