Gymnogyps californianus (California condor): 127025797
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Entry
127025797 CDS
T08687
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04270
Vascular smooth muscle contraction
gcl04625
C-type lectin receptor signaling pathway
gcl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127025797
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127025797
09153 Circulatory system
04270 Vascular smooth muscle contraction
127025797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127025797
Membrane trafficking [BR:
gcl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127025797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
AAA_23
Motif
Other DBs
NCBI-GeneID:
127025797
NCBI-ProteinID:
XP_050766866
LinkDB
All DBs
Position
25:3345352..3422500
Genome browser
AA seq
1544 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEMDLAAFGHMSPIMTSLHSP
GTSGNAERITSPVLVGEENNIVHNQKVEILRKMLQKEQERLQSLQEEYSRSPTTRLLKEI
QETKKHIPQLQEQLSKATGCTQDGVLSSRSVSESLQISEAEAESGDCVSKLDYSGDSPSR
PNSDIADSPRSGLKERIYPDESPEKTEVQDTDSQSSVGSPLSRVGPQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYADLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQTMQDKVGPEVQRNLED
FRQKRSMGLTLAEVELTRLDAERVRDRNAVEKERACAEPIIAKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHLPTASSVSPEPPDSSKMRQSGSSSDGTDAPYPP
ANPMSPLAMGPFSSPEGSKDSESGLKQTGEAPPANDCMDGTPRTPNNTFEFPSPLENLQE
EEGESERMVDMGTPKPFRKMDSVGYADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKRKIFSNLEDILGLHV
ALNDQMKAIRKRNETSVIGQIGEDLLSWFSGPAEEKLKHATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKS
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSTRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLMLNAQSSSPIISEKSK
VESLLVSERQFDKVQQADLTLKDSSACYEHTTTSLPSVSEGQWALDALRNLGLLKQLLVQ
QLGFSEKGTLEDRQRFPRFRTISQEAQTESGNEPRLQHSDNNKFHQPGTDRTLPRTGTNE
CTANYGLRTSAESPASGDAMQLIVRDPRSSSNLAIDHMSMNLEISTAELEGVGADESGEH
FFDAREAHSDENPSESELMERKEEEDVQIRISGNYLILDGYGTVQESSTDEEVSSLVLQC
TGGGRTSLDSAQQQPLSPRDTQSDGGSSPFAEEMMASRWGAVEESCSFVASPHFSIESRV
QMMQYIQKIEDDLEKLKEVEEDYTILRRQGLAGSASTGEHSDKS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctacaagacat
ggcagcattctgagcagagagtctccagctgacaagaaacagaaggttgaacgctgcagt
agtacgcacgactttgatccgacagatagctcctccaagaagacaaagtctagttcggag
gagagtagatccgagacatatggtcttgttcaacggtgtgttgttatccaacgagatgaa
aacggatttgggctgacagtcagcggagacaatccagtcttcgtgcagtccgtcaaagaa
gatggagcagccatgcgggctggagtgcaaacaggtgatagaattatcaaggtgaatggc
actcttgtaacacactcaaaccatttggaggtggtaaagctgatcaagtcgggttcctat
gtagctctcactgttcaggggcgcccaccagggtcaccccagattccattagctgattct
gaaatggatctggcagcatttgggcatatgtctcccatcatgacatctctccattcgcct
ggcacatcaggaaatgcagaaaggattactagtccagtgcttgtgggggaggagaataat
attgtccacaaccagaaggtggagattctgagaaagatgctacagaaagagcaggagcgg
ctgcagtctctgcaagaagagtatagccgctcacccaccacacgactgctcaaagagata
caggaaacgaagaagcacattcctcagctgcaagagcagttgtccaaagccacaggctgt
actcaggatggagtcttgtcctccaggtctgtttcggaatcactgcagatcagtgaagcg
gaggcagagagcggggattgtgtgagcaaactggattacagtggtgacagcccctcccga
ccaaacagtgacattgctgatagtcctcgcagtggcttgaaggagcgtatttatccagat
gagagcccagaaaagactgaggttcaggatactgattcccagtccagtgttggaagtcct
ttatcccgagtggggcctcagatcattggagcagaggatgatgactttgacactgaacag
gagcagattaatggacaatgcagctgtttccaaaacattgagctcctgaaatcgcgccca
gctcacctggctgttcttttgcatcatgtggtgtcccagtttgaccctgcagcattgttg
tgctacctttatgcagacttgtacaagcagaccaactccaaagagactcggcgtgtcttc
cttgagttttaccagttcttcttggaccgagctgcaaatctaaaagttccagttccagat
gaaatctccttagaactagacagaagaaggccagaactccttcctgaagagcttcatcgc
cagtttatacaaactatgcaagataaagtcggtccagaagttcaaaggaatctggaagat
ttcaggcagaaacgtagtatgggattgaccctggcagaagtagagctaaccaggctggat
gcagaaagagttcgtgaccggaatgcagtggagaaggaaagagcatgtgcagaacccatt
attgctaaaattgaggaagtcttgatgacatctcagcctttggaagaagacaagagttcc
acaatgcagtatgtgattcttacttacatgaaacacctgggagtcaaagttaaagaacct
cggaacctggagcagaagcgtggccgtattggtttcttgccaaagatcaagcaaagtatc
aagaaagagaaagaaggagaggaaaaaggaaagagaagaggctttcccaatattctgggc
ccaccaaggagaccgagtcgacatgatagcagtgcaattggcagagccatggaaatgcag
aagccccgccatccaaagcacctacctacagcgtcttctgttagcccagagccaccagat
tctagcaagatgcgccagagtgggtcctccagtgacggaacggatgcaccgtacccacct
gccaacccaatgtctcctttggcaatgggtccgttttcctctccagagggaagcaaggac
agcgaatcaggtttgaagcagactggagaagctccacctgctaatgactgtatggatggc
acaccccgcacacctaataatacctttgaattcccatctcctttggaaaacttgcaggag
gaggagggagaatcagagagaatggttgacatgggaacaccaaagccttttcgcaagatg
gacagcgttggttatgcagatgtacaaagtgaagatgagctatatgactttgacatggac
atggaccctcccaactggcagcagcttgtgagccgagaagtgttgatggggctgaaaccc
tatgaaatcaagcgccaagaagtgattaatgaattgttttacactgagagagctcatgtc
cgcacgctgaaggttctgcataatgtcttctaccagcgtgtcacccgggaagggatcctg
aactccagtgacaaacggaaaatcttttcaaatctggaggatatccttgggcttcatgtt
gcattgaacgatcagatgaaagctatccgaaaaaggaacgagacttctgttattggccaa
attggggaagacttgctttcctggtttagtggaccagcagaggagaagctgaaacatgca
actgccaccttctgcagtaaccagccctttgctctagaggtcatcaagtcacgccagaag
aaggactctcgcttccagacttttgtgcaggatgctgagagtaatccactgtgtcgccgg
ttgcagctgaaggatatcattcccacagagatgcagaggttgacgaagtacccccttctg
ctggataacattgctaagtacacagaactgcctgaagagaaagagaaagtgaagaaatca
gcagatcattgtcgtcagatccttaaccatgtgaaccaggctgtcaaagagtctgagaac
aagcagcatttggaagattatcagcgtcgtctcgacctgtcctacttgaagcagtctgag
gatcccatgatggatgagttcaggaacttggatctaacaaagagaaaaatgcttcatgaa
ggacctctaacttggaaggtcaatcgtgacaaaactatcgatctctacactctgcttcta
gaggacattctggtgctgttgcagaaacaagatgataaactggtactgaagtgtcacagt
aaaatcttggcatcgacggctgacagtaaacacaccttcagtcctatcatcaagttgaac
actgttctggttcgtcaggtggcaacagataacaaagctttcttcgtcatctccatgtca
gaaaatggcgctcatatttatgaactggtggcacagactgtttcagaaaagaatgtatgg
caggaccttatagctcagatggcagggactgtaaaaatggggagtacgagaagagtgatt
ccattaccacagtcaggacctggcgaagaagagcgtgaggaagaggagcagcagaagctc
aaagagcagcatgacattcctgccagtagtctacaaagtccagataaagatttgggcctt
gaatctcccttaatgctgaacgctcagtcgtcttctcccatcatatctgaaaagtccaag
gtagaaagtcttcttgtgtcagaaagacagtttgataaagtgcagcaggcagacctgaca
cttaaagattcttctgcatgctatgaacacaccaccaccagtttaccttcggtatcagaa
ggacagtgggcattggatgcattaaggaacttgggcttgctgaaacaattgttggtacag
cagcttggcttttctgagaaggggacccttgaagaccggcagcgctttccgaggtttagg
accatttctcaagaagcccaaacggagagtggaaatgagcctcgactacagcactctgac
aataacaaatttcaccagcctggaacagacagaacgcttccgagaaccggaactaatgag
tgcacggctaattatggcctccggacttcagctgaatcaccagcttcaggggatgccatg
cagctgatagtgagagaccccagatcaagtagtaacttagcaatagaccacatgagtatg
aatctggagatctcaactgcagagctggaaggggtaggtgctgatgaaagcggggagcat
ttttttgatgctcgagaagctcacagtgatgaaaatccatctgaaagtgaactaatggaa
aggaaggaagaagaggatgtgcaaatacggatctcaggaaattatttgatccttgatgga
tatggaacagtgcaggagagctccacagatgaggaggtatcgtctctagttctccagtgc
actggaggtggccgcacctctttggactctgcacagcagcagccactttccccacgggac
acccagtcagatggaggaagctccccgtttgctgaggagatgatggcctcgcgctggggg
gcagtggaagagtcctgctcatttgtagcaagccctcacttctctatagagtcacgtgtg
cagatgatgcagtatattcagaagatagaggatgaccttgaaaagttaaaggaggttgag
gaagactacaccattctccgacgccaagggctggctggatcagcctccacaggagagcac
tcagacaaaagctag
DBGET
integrated database retrieval system
