Gymnogyps californianus (California condor): 127025832
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Entry
127025832 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule DSCAML1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gcl04515
]
127025832
Cell adhesion molecules [BR:
gcl04515
]
Immunoglobulin superfamily
DSCAM family
127025832
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
127025832
NCBI-ProteinID:
XP_050766920
LinkDB
All DBs
Position
25:complement(1220893..1331165)
Genome browser
AA seq
2047 aa
AA seq
DB search
MWLVTFFLLYSLRKAHAEDVGTSLYFVNDSIQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKTQTAQDFSIIMLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRTNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGXTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
MLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSGEVFLTELREATWYELRMKACNSAGCGN
ETTQFATLDYDGSEHHPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKR
LKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKA
TIPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHST
RNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMST
PSEPGICRFTASPPKPQDSERGKSVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPC
PVVPPREASIRNLARAYHAQARHMTLEPGSKPLGLPPPASAATTLPQRTLPMPGATSAAA
APAASAGPAPPAAAEPPLLPPPPPPRRGCPHSKVGGSRDSLLEMSTSGVGRSQKQGAGAY
SKSYTLV
NT seq
6144 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttttcctgctgtactctttgcggaaagcacatgccgaagatgtt
ggaaccagcctctactttgtgaacgactctatccagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtccttcggtggtacctg
gccacaggcgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcggagaactcggctggcaaaatcaggagcccaaacatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatacgttagtgttgtgtcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggagccaggctctcggtctcagacccg
gcggagtccatccccacgatgctagacagcttccagtcccgggaggtgaaagcgggccgg
ctggtggagctgccctgcattgcctcgggctaccccaacccggccgtccggtggatcaag
gacgggcgcccgctccccgccgacagccgctggaccaagcgcatcacgggcctgaccatc
agcgacctgcgcgtggaggacagcgggacctacatctgcgaggtgaccaacaccttcggg
tccgcagaggtcaccgggaccctcacagtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacaggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacgtcatccgctggtaccgcaacacggacctcgtggcggtggatgactacatc
tccatccgggggatcagcaacgagaccctcctcatcacggccgcgcagaagagccactcc
ggggcctaccagtgctttgccacccgcaagacccagacggcacaggacttctccatcatc
atgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggcccccccgccgaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgcaccaaccagtacaccatg
tcggacggcaccacggtcagccacatgaacgtgacgagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgagcgatgaagaacataacagcggtagcgggtagggac
actttcatcaactgcagggtgatcgggtacccgtattactccatcaagtggtacaaggac
tctttgctgctgcccgataaccaccgccaagtggtctttgaaaacggcactcttaagctg
atggacgtccagaaaggcatggatgaaggagagtatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcacggtgaaagtccctccgctgatccagccc
ttcgagttcccgccagcctccatcgggcagctcctctacatcccctgcgtggtctcctcc
ggggacatgcccatccacatcacctggaggaaggacggccacgtcatcctctccggctct
ggagtcaccatcgagagcaaggagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacggcaactacacctgcatcgccagcaacgacgctgccacggtcagccgggag
cggcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagatggc
atttacggtaaagccggggtgctgaattgctccgtcgacgggtacccccctccgaaagtc
atgtggaagcacgcaaaaggcagcggcaacccccagcagtaccaccccatacccctcacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggggtgggcacagacatcagcaagtccatg
ttcctcaccgtgaagatcccggccatgatcacctcccaccccaacaccaccatcgccatc
aagggcnagaccaaggagctgaactgcaccgcccggggcgagcggcccatcatcatccgc
tgggagaagggcgacaccgtcatcgaccccgaccgtaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaaccagccgatcgcggggac
tcggtcttcttctcctgtcatgccatcaactcctatggcgaggacagaggcttgatccag
ctcactgtccaagagccccctgacccgccggagctggagatccgcgaggtgaaagcccgg
agtatgaatttgcgatggacgcagcggtttgacggcaacagcatcatcaccgggttcgat
atcgagtacaagaacaagtcggattcctgggattttaagcagtctacgcgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctccacccagcctccgtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagcgagccgagcaaggagctcaccatcagcacg
gaggaagcagctcccgatgggcctccgatggatgtcaccttgcagccgatgacgtcccag
agcatccaggtcacctggaaggccccgaagaaggagctgcagaacggggtgatccgtggc
taccagatcgggtaccgggagaacagcccgggcagcaacgggcagtacagcattgtggag
atgaaagccacgggagacagcgaggtctacacgctggacaacctgaagaagttcgcccag
tacggggtggtggtgcaggcgttcaaccgcgcggggacgggaccgtcgtccagcgagatc
aacgccaccacgctggaggacgttcccagccagccccccgagaacgtgcgggccatctcc
atcacgtcggacgtggccgtgatctcctggtcggagcccccgcgcagcaccctcaacggg
gtgctcaagggataccgggtcatcttctggtccctctacatggatggagagtggggcgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaagttcacc
aactacagcgtgcaggtgctggcgtacacccaggccggcgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccggccggcatcaaggctgtcccg
tcttccgccagcagcgtggtggtgtcctggctgccgccggccaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggcccccagcgagtac
gagaccagccccgaccagctcttctaccgcatcgcccacctgaaccgcgggcagcagtac
atgctgtgggtggccgccgtcacctccgccggccgcggcaacatcagcgagaaagtcacc
atcgagcccgccgggaaagcccccgccaagatcatctccttcggaggcaccgtcaccacc
ccatggatgaaggacgtgaggctgccgtgcaactccgtcggggagccggtccccgccatc
aagtggaccaaggacagcgaggactctgccatccccgtgacggtggacggccatcgcctg
atccaggccaatggcacgctggtgctgcgctcggtgaaagcggaggactccggctactac
acctgcaccgccaccaacacctggggcttcgacaccatcatcatcaacctgctggtgcaa
gtgcccccggaccagccccgcctgaccgtctccaagacctcggcgtcgtccatcacgctg
gcctggattcctggcgacaacgggggcagctccatccgaggcttcgtgctccagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctcctccgagcgctccttcaag
ctggagagcctcaagtgcggcacctggtacaaggtgaagctggcggccaagaacagcgtg
ggggctggccgcatcagtgagatcatcgaagccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcatgccaggctgaacctgcaa
ggctggagcagcgggggctgccccatcaccgccatcgtcctggagtaccggcccaagggc
aactgggtctggcagagcctccgcaccaacagctccggcgaggtcttcctgacggagctg
cgcgaggccacgtggtacgagctccgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccacgcagttcgccacgctggactacgacggcagtgagcaccatccccctatcaag
tctgcccaaggggagggcgacgacgtgaagaagctcttcaccatcgcctgccccgtgatc
ctggccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcgg
ctgaagaggcttcgagatgccaagagtttggctgaaatgctgatcagcaagaataaccgc
agctttgacacgccggtgaagggccccccgcaaggcccccgcctgcacatagacatccct
cgggtgcagctcctcatcgaggacaaggaaggcatcaaacagctgggggacgacaaagcc
acgatcccggtgaccgacacggagttcagtcaggcggtgaacccccagagcttttgcacg
ggcgtctcgctgcatcaccccgctctgatccagaacacggggcccctcatcgacatgtcg
gacatccgccccggcaccaaccctgtgtcaagaaagagcgtgaagtctgcacacagcacc
cgcaaccggtactccagccagtggaccctcaccaagtgccaggcgtccacccctgcacgg
accctcacctctgactggcggacagtgggctcccagcacggcatcacggtcaccgagagc
gacagctacagcgccagcctctctcaggacacggacaaggggcggaacagcatggtgtcg
acggagagtgcctcgtctacctacgaggagctggcacgcgcctacgagcacgcgaagctg
gaggagcagctgcagcacgccaagttcgagatcacggagtgcttcatctccgacagctcc
tccgaccagatgaccaccggcaccaccgacaatgccgacagcatgacctccatgagcacc
ccgtccgagcccggcatctgtcgcttcacagcctccccgcccaaaccccaggacagcgag
cggggcaagagcgtggctgtacccatcccgcaccgggccagcaagagcgactactgcaac
ctcccgctctacgtcaagtcggaggccttcttccgcaagcccgacgcccacgagccctgc
cccgtggtgccgccgcgggaagcctccatccgaaacctcgcccgggcctaccacgcgcaa
gcccggcacatgacgctggagcccggcagcaagcccctgggcctgcctcccccggcctcc
gccgcaaccaccttacctcaaaggactctccccatgcccggcgcgacgagcgccgctgct
gcacccgccgccagcgccggccccgcgccccccgccgccgccgagcccccgctgctgccg
ccgccgccgccgccgaggcgcgggtgcccacactccaaagtggggggctccagggactcg
ctcctagaaatgagcacatcgggtgtaggcaggtctcaaaaacagggggctggagcctac
tccaagtcctacacgctggtgtag
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