Gymnogyps californianus (California condor): 127025878
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Entry
127025878 CDS
T08687
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04140
Autophagy - animal
gcl04148
Efferocytosis
gcl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127025878
04148 Efferocytosis
127025878
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127025878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127025878
Membrane trafficking [BR:
gcl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127025878
Hops complex
127025878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
ISG65-75
zf-ANAPC11
zf-RING_11
Paralemmin
zf-C3HC4_3
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
127025878
NCBI-ProteinID:
XP_050766990
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All DBs
Position
25:complement(77903..87514)
Genome browser
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVKEPPGPDGAGGKPFALPPGIAVCDSGRGSLVFGDMEGQIWFL
PRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVRFDVETAIKV
LRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALRYIGKLPFDQAESNMKRYGKIL
MHHVPNETTELLKILCTDYRPSGDNEGPGMLEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
DCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDEQR
IKKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKAATTIEAGLQRELLIHAKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcagtggcgccgcttcgtcttcttcgacagggagacggtgaaggag
ccgccggggccggatggggccggcgggaagcccttcgcgctgccgccgggcatcgcggtc
tgcgactcgggccgggggagcctcgtgttcggggatatggaaggtcagatttggtttttg
cctcgctcccttcaactcagtagtttccaggcgtacaagctaagggtaacgcacctgtac
cagctgaagcagcacagtatcttggtttctgttggtgaggatgaagagggtattaacccc
ttggttaaagtctggaacctggagaaacgagatggcggcaatcctctttgcacgcgaatt
tttccagcgataccaggtaacaagcccacggttgtatcctgcctaactgtccacgagaat
cttaatttcatggctattggttttgcagatgggagtgttgtacttacaaaaggagacatc
actcgagaccggcatagtaagacccagatcctacacgaaggcagttacccggttactggc
cttgctttccgacagtctggcaaaacaacgcacctatttgtggtgaccacagagaacatc
cagtcttatatgctttcagtgaaagactatcctcacctggagctggacactcacggttgt
ggattgcgctgttcatctctcagcgacccctcccaggatctccagttcatcgtggcagga
aacgaatgcgtgtacctttatcagccagatgaacgtggcccctgctttgcgttcgaggga
caaaagctgattgttcactggtatcgggggtacctcatcattgtctccaaggaccgaaag
acttctccaaagtcagagtttgctgggaatgaggcacagaattcggacaaacaagtcctg
aatatctatgacttgtgcaacaaattcattgcgtacagctcgatcttcgatgacatagtg
gatgtcttagccgagtggggttctctgtacgtactgaccagagacgggaagattcacgta
ctgcaggagaaggatacgcaaaccaaactcgagatgctgttcaggaagaacttatttgaa
atggccattaacctggccaagagccaccacttggacagtgatggcttgtcagagatcttc
cggcagtatggcgatcatctgtataacaaggggaaccacgatggagccatccagcagtat
atccgaactatagggaagctggaaccgtcttacgttattcggaaattcctggacgcccag
cgtatccacaacctcactgcttatctgcagacgctccacctgcagtccctggccaacgca
gaccatactacacttctgctgaattgctataccaaactcaaagacagctccaaactggag
gagttcattaagacgagtgagagcgaggtccgctttgatgtggaaacggcgatcaaggtg
cttcgtcaagcgggttactactcccacgctgtgtacctggcagagaagcacgcgcatcat
gaatggtacctcaaaatccagctagaggacatcaagaactaccaagaggctttgcgctac
attggcaaactgccttttgatcaggcagagagtaacatgaagcggtatggtaaaatcctg
atgcaccatgtccctaacgagaccacagaattgctgaagatcctttgcactgattaccgg
ccatcgggagacaacgaaggccctgggatgctggaaggaaaaaaggctaattcagaggag
ttcattccggtctttgcaaacaactcccgagaactgaaggcttttctggagcacatgact
gaggtgcaggctgactctccgcagggtgtctatgacactttactggaacttcgactccag
aactgggcacacgaacaagatgagcagatcaaggagaagctgcacaatgaagccctcacc
ctcctgaagagcggaaggttcaaaacagtcttcgataaggccttggtcttatgtcagatg
cacaatttcaaggatggtgtcctctacctctatgagcagggcaaacttttccaacagatc
atgcactaccacatgcagaatgagcagtacaagaaggtgatcgaggtgtgcgagttgtac
ggagaccaagaggcttgtctctgggaacaggctctcggctactttgcgcggaaggaggag
gactgcaaagagtatattgctgcggtgctgaaacacattgagaacaagaatcttatgcct
ccgttgcttgttgtgcagacgctggctcataactccacagccacactgtctgtgattaag
gattatcttgtcaacaagctgcagaagcagagctgccagatagagcaggatgaacagaga
attaaaaaataccgagaagaaactacaaggatccgccaggagatcgaagagctaaaagca
agtcccaagatctttcagaagaccaagtgtagcatttgcaccagtgccctggagctgcct
tcggtccacttcctgtgcggccattccttccaccagcattgctttgaaagctactcggag
agcgattcagaatgtccgacttgcatgccagaaaatcgcaaagtgatggacatgatccga
gcccaggagcagaagagagatctgcacgaccagtttcagcatcagctcaagtgctccaac
gatggcttctccgttgtcgccgactactttggtcgaggcgtcttcaacaagctcaccctc
atcacggacctgccctcgggcaaagcggctacgacgatcgaggctggcctccagcgggaa
ctgctcatccacgccaagcgcagtacctga
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