Gymnogyps californianus (California condor): 127025970
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Entry
127025970 CDS
T08687
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gcl03037
]
127025970
Cilium and associated proteins [BR:
gcl03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
127025970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_8
TPR_14
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_10
TPR_17
ARM_TT21_4th
TPR_9
TPR_CcmH_CycH
TPR_15
ARM_TT21_5th
HEAT_Nup120
ARM_TT21_C
TPR_21
DUF6584
DUF2989
HAT_PRP39_C
FumaraseC_C
Coatomer_E
ARM_TT21_2nd
GnHR_trans
Motif
Other DBs
NCBI-GeneID:
127025970
NCBI-ProteinID:
XP_050767067
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Position
1:19600341..19652159
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AA seq
818 aa
AA seq
DB search
MMQNVHLAPEADEDDLYSGYNDYNPTFDTEDLENDVAFQQAARTSHGRRPPVTAKIPGTS
ASRPLATGFGSKATLTSSMGRPMTGAIQDGVTRPMTAVHAAGYTKAAMRGSSFDPLGQAR
GPAPPLEMKNSDSSEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERVLVR
QREQIATPENINLDLTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFSNGGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYVDAISSFEHIMS
MSPNLKAGFNLILCYFAIGNGEQMKKAFQKLIAVPLEVDYDDKYISPNDDPHTNLLIEAI
KNDSLRQIERERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEVVKASHYVELANDLEI
NKATTYLRQQDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQATNYADLAVNS
DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRIDEALD
CFLKLHAILRNSAQVLHQIANIYEIMEDPSQAIEWLLQLISVVPTDPHVLSKLGKLYDNE
GDKSQAFHYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYMTKLKKVEKL
KEIREQRIKSSRDGSARSRREGNAGGDSGGTKGERLSAKLKALPGTSEPYESSGSKEIDA
SYIDPLGPQAERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatctggctcctgaggctgatgaagatgatctttattctggctac
aatgattataatcccacgtttgacacagaggatttagaaaatgatgtagcttttcaacag
gcagcaagaacaagtcatggtagaagaccccctgtgacagccaaaattcctggtacatca
gcttcaagacctttagctactggatttgggtcaaaggcaactttaacttcatctatggga
agaccaatgacaggagctatacaggatggggttactcgaccaatgacagcagtgcatgct
gcaggttacactaaggcagctatgagaggttcttcatttgatcctcttggccaagcaaga
ggtcctgctccgcctctggaaatgaaaaattcagacagttcagaagagaagattaggcag
ttggaaaaaaaagtgaatgaactggttgaagaaagctgcattgccaacagctgtggagac
ttgaaattggctctggaaaaagcaaaagaggctggaagaaaggaaagagtattggtgaga
caacgtgaacaaattgctactccggaaaacatcaacttagacctcacttactcagttctt
ttcaatctggccagtcagtatgctgctaatgaaatgtatgctgaagcactgaatacttac
caagttatagtgaagaataagatgttcagcaatggaggtaggctgaaggtgaatatggga
aatatatatttaaagcaacggaactattccaaagctatcaaattctaccgtatggctcta
gaccagattcctagtgtccacaaagagatgaggattaaaataatgcaaaatattggagtt
gcatttattaaaactggccaatatgttgatgccatttcttcatttgaacatataatgagc
atgtccccaaacttgaaggcagggttcaacttgatcctatgttactttgctattggaaac
ggtgagcaaatgaaaaaagccttccaaaaactgattgctgttcccttggaagtggattat
gatgacaaatacatttcaccaaatgatgatccacatacaaatctactgattgaagccatt
aaaaatgacagcttaaggcaaatagaacgtgagaggaaatccatggcagaggaatacatc
atgacagctgctaaactcattgcaccagtaattgagacatcttttgcagtgggctatgac
tggtgtgttgaagtagtaaaagcttcccactatgtcgagttagccaatgacctggaaata
aataaagccactacttacttgaggcagcaggattttaaccaggcactggagactttaaaa
atgtttgaaaaaaaggatagcagagtaaagagtgcagctgcaacaaacctttcattcctt
tattatttggagaatgaattggcacaagcaactaactatgcagatttagctgtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactgtttttgcaaacggagac
tatgaaaaagcagctgagttttataaggaggcgctcaggaacgattcctcgtgcactgaa
gcactttataatcttggtttaacatacaagaagttaaacagaatagatgaagctttggac
tgttttctgaaactccatgcaatccttcgaaatagtgcccaagtccttcaccagatagca
aacatatatgagatcatggaagatcccagtcaagccatagagtggctcctgcagttgatc
agtgtagtaccaactgatccacatgtactttcaaagctagggaaattatatgataatgaa
ggtgataaatcccaagcttttcattattactatgagtcgtaccggtatttcccttcaaac
attgaggtcattgaatggcttggagcctattacattgacacccagttttgtgaaaaagcc
attgagtattttgaaagagcagcacttatcctaccaacacaagtgaagtggcagctgatg
gttgccagttgctacaggagaagcggtaactaccagaaagctctagagaaatacaaagtc
attcacagaaaattcccagagaatgttgaatgcctccgatttttagttcgtctctgcaca
gatatggggctgaaagaagtccaggaatatatgacaaagctcaagaaagtggaaaaatta
aaagaaataagagagcagcgcattaaatctagcagagatggcagtgcacgtagccgcaga
gaaggaaatgctggtggtgacagtggtggtaccaaaggcgaaagactgagtgccaaacta
aaagctttgcctggaacaagtgaaccctatgaaagtagcggcagtaaagaaatagatgcc
tcctacatagatccacttggcccacaagcagaaagaccaaaaactgcagcaagaaaaaga
actgaggaagatgactttgctgatgaagaactaggagaagatttgcttccagaatag
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