Gymnogyps californianus (California condor): 127026378
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Entry
127026378 CDS
T08687
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04010
MAPK signaling pathway
gcl04020
Calcium signaling pathway
gcl04260
Cardiac muscle contraction
gcl04261
Adrenergic signaling in cardiomyocytes
gcl04270
Vascular smooth muscle contraction
gcl04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127026378
04020 Calcium signaling pathway
127026378
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
127026378
09153 Circulatory system
04260 Cardiac muscle contraction
127026378
04261 Adrenergic signaling in cardiomyocytes
127026378
04270 Vascular smooth muscle contraction
127026378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gcl04040
]
127026378
Ion channels [BR:
gcl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127026378
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
127026378
NCBI-ProteinID:
XP_050767548
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All DBs
Position
27:complement(7458777..7508017)
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AA seq
1850 aa
AA seq
DB search
MEPASPQDDVKKRQQKEKSKKPVPPAAPRPARALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAIYLPMPEDDTNVANSSLEKIEYAFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVSLGLITMTLEQVNAKQGGTSGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYLGTDVIATVASE
KPAPCTNSGHGRHCTINGTECRSGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSDRARGEGMMPSDEGGSETESLYEIEGMNKWILYFRQWRRWNR
MFRRKCRDVVKSKFFYWLVILLVALNTLSIASEHHFQPEWLTLVQDNANRVLLALFVAEM
LLKMYALGLRQYFMSLFNRFDCFVVCAGILETILVELGTLSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKFDFEDMKVRRSTFDN
FPQALISVFQILTGEDWNSIMYDGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTLAQKAKAEERKRRKMSRGYPEKSEDEKQMLAKKLEQKAKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSF
FIFSPTNKFRMLCHRIVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGF
TSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISMGIESSAISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYRCTD
PSKMTEKECRGYFVNYVDGDPTQIELQERVWLHSNFHFDNVFSAMMSLFTVSTFEGWPEL
LYMAIDTNAEDTGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQH
YNQSAEMNHISDILNVAFTILFTLEMILKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTVLASSGGLYCLGGGCDSIDPDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLDCSYGKLCDPESDFAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNPVEIQAGL
RSIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIYRRTGGLFGQVDSFLEPSSPLQ
PHVASQRPLQFTEVGSEDLDSPVFLDDFPQEGNTNINNANSNNWLEGMEYEDEVLRKTVP
AAPRRPARKRNYPLPMESLQRRPSRRRGATSGGHPSSGLRLLPQELPREDGTVTGTASSS
GYQQGESGDPSTSSTPAITFLIQEALISGGLAALARDPSFVAVTRDEMAASNQLEMDEVE
KAAVELLKGRETLQGTKTGSAPQDTLAASPASSPGLSAAPSQKTTAATRL
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcttctccccaggatgacgtgaagaagaggcaacagaaggagaagtccaag
aagccagtgccgccagcagcaccccgaccagccagggctctgttctgcttaaccctgcaa
aaccccctgcgcaaggcatgcatcagcatcgtggagtggaaacccttcgagatcatcatc
ctcctgaccatctttgccaactgtgttgcactggccatctacctgccgatgcctgaggat
gacaccaatgttgccaactccagcctggagaagatcgaatacgccttcctgatcttcttt
gccattgaggcgatgctcaagataattgcctacgggtttcttttccatacggatgcctat
ctccgaaacggctggaacgtgctcgacttttccatcgtgtctctagggcttatcaccatg
accctggagcaggtcaatgcgaagcagggagggacttcagggggaaaaggcggctttgac
gtgaaggccctgcgagcatttcgtgtgctgagacccctgcgcctggtgtccggagtgccg
agccttcaggtcgtcctgaactccatcatcaaggccatggtgcccctgctccacatcgcc
ctgctggtcctcttcatgatcatcatctatgccattgtagggcaagagctcttcaagggc
aagatgcacaagacctgctactaccttgggacagatgtgattgccaccgtggcatcagag
aagccagccccatgcaccaactctggccacgggcgacactgcaccatcaatggcactgag
tgccgaagtggctggccggggcccaacaacggcatcactcacttcgataactttggcttt
gccatgctgactgtctatcagtgcatcaccatggagggctggaccgaagtcctctactgg
gtaaatgatgccattgggaatgaatggccctggatctactttgtcagccttatcttgctt
ggctccttcttcgttctcaacctggtgctgggggtgctgagcggtgagttcaccaaagag
cgtgagaaggccaagtcgcggggcacgtttcagaagctgcgggagaagcagcagctggag
gaggatctgaagggctacatggactggatcacccacgctgaggtcatggacagtgaccgg
gccaggggagaaggtatgatgccatcagatgaaggagggtcagagacagagagcttgtat
gaaattgagggcatgaacaagtggattctctacttccgtcagtggaggcgttggaaccga
atgtttcgtaggaagtgcagagatgtggtgaagtccaagttcttctactggcttgtcatc
ctgctggtggcactgaacaccctctccatcgcctctgagcaccacttccagccagaatgg
ctgacactggtgcaagacaatgccaaccgggtgctgctagcactctttgtggctgagatg
ctgctgaagatgtacgcactgggcctgcgccagtacttcatgtcgctcttcaaccgcttc
gactgcttcgtggtgtgtgcggggatcttggagaccatcctggtggagctcggcaccttg
tcacccctgggcatctctgtgctgcgttgcatccggctcctccgcatcttcaagatcacc
aggtactggacatccctgagcaacctggtggcctccctgctcaactcggtccgctccatt
gcctctctgctcctcctcctcttcctcttcatcattgtctttgcgctgctgggcatgcag
ctctttgggggcaagtttgacttcgaggacatgaaagtgcggcgcagcacattcgacaac
ttcccccaggccctcatcagtgtcttccagatcctgactggagaggactggaattcaatc
atgtacgatgggatcatggcctacgggggcccgtcctttcctggcatgctggtctgcatc
tacttcatcatcctcttcgtctgtgggaactatatcctcctaaatgtcttcctggccatc
gcagttgataacctggccgaggctgagagcctgaccttagcccagaaggccaaagcagag
gaacgcaagcggcgaaagatgtccagaggttacccagagaagtctgaagatgagaagcag
atgctggcaaagaagcttgagcagaaggcaaagggagaagggattcctacaacagccaag
ttaaaagtggacgaatttgaatccaatgtcaatgagatcaaagacccttacccttctgca
gattttccaggtgacgatgaggaagatgagcctgaaatccccctgagtcctcggccacgt
ccccttgcagagctacagctgaaagagaaggccgtgcccatgcctgaagccagctccttc
ttcatcttcagcccaaccaacaagtttcggatgctgtgccacagaattgtcaacgccacc
tggttcaccaacttcatcctgctcttcattctgctcagcagcatctcgctggcagccgag
gatcccatccgggctgagtccttccgcaaccagattctcggatactttgacattggtttc
acatctgtcttcacagtcgaaatcgtcttgaagatgacagcctatggtgctttcctgcac
aaaggctccttctgcaggaactctttcaatatcctcgacttgctggtggtcgctgtctcc
ctcatctccatgggaatcgagtccagtgccatctcagtggtgaagatcctccgggtgctg
agggtgctgaggcctctgcgagccattaacagggcaaaggggctgaagcatgtggtccag
tgtgtgttcgtggccatcaagactatcggtaacattgtggtcgtcacgacattgctgcag
ttcatgtttgcctgcatcggcgtccagctcttcaagggcaagttctatagatgcacagat
ccatccaagatgacagagaaggagtgcaggggttatttcgtcaactacgtggatggggac
cccacacagattgagctacaggagcgtgtctggttgcacagcaacttccacttcgacaac
gtcttctcagccatgatgtcacttttcactgtctccaccttcgagggctggccagagctg
ctgtacatggccattgacactaatgctgaggatacaggccctatctacaactaccgggtg
gagattgcaatgttcttcatcatctacatcatcctcattgccttcttcatgatgaatatc
tttgtgggctttgtcattgtcaccttccaggagcagggggagagcgagtacaagaactgt
gagctggacaagaaccagcgccagtgtgtgcagtatgcgctgaaggctcgcccgctgcgg
cgctacatccccaagaacccctaccagtaccagatctggtatgtggtcacctcctcctac
tttgagtacctcatgttcttcctgatcctgctgaacaccatctgcctgggcatgcagcat
tacaaccagtctgcagaaatgaaccacatctcagacatcctcaacgtggccttcaccatc
cttttcactctggagatgatcctcaagctcatggcctttaaagccaagggctacttcgga
gacccctggaatgtcttcgacttcctcatagtgattggcagcatcattgacgtcatcctc
agtgagattgacactgttcttgcatccagtggcggattgtactgccttggtggaggctgt
gatagcattgaccccgatgacaactcccgcgtctccatcactttcttccgactgttccgg
gtgatgcggctggtgaagctgctgagccggggggaaggtgtcaggacccttctgtggacc
ttcatcaaatccttccaggctctgccctacgtagccctgctgattgtgatgctttttttc
atctatgctgtgatcggcatgcagatgtttgggaagattgccatggtggacgggacccag
atcaaccgaaacaacaacttccaaacctttccacaagctgtgttgctgctcttcaggtgt
gcgactggcgaggcctggcaggagatcctgctggactgcagctatggcaagctgtgtgac
cccgagtcagactttgccgagggcgaggagtacacctgcggcacggggttcgcctacttc
tatttcatcagcttctacatgctctgcgccttcctgatcataaacctctttgtggccgtc
atcatggacaactttgactaccttacacgtgactggtccatccttgggccccatcacctg
gacgagttcaaacggatctgggctgagtatgaccccgaggccaagggcagaatcaaacac
ttggatgtagtgactctgctgagacgtatccagcctcccctgggcttcgggaagttctgc
ccacaccgtgtagcttgtaagcgtctagtgtgcatgaacatgcccctgaacagcgacggc
accgtcaccttcaatgcaaccctctttgcgctggtgaggacagccctcaagatcaagaca
gaaggtaactttgagcaggccaacgaggagctcagagccattatcaaaaaaatctggaag
cgaacgagtatgaagcttttggaccaggtcatcccacctattggagatgatgaggtgaca
gtgggcaaattctatgctactttcctcatccaagagcatttcaggaagttcatgaagcgc
caggaggagtattatgggtaccggcccaagaagaaccctgtggagatccaggctgggctg
aggagcattgaagaagaagctgctcctgaaatccatcgggccatttctggggacctgact
gctgaggaggagctggaaagagcaatggtggaggctgccatggaggaagggatatacagg
aggacgggtggcttgtttggccaggtcgacagcttcctggagcccagcagccccctgcag
ccccacgtggccagccagaggcccctgcagttcacagaggtgggcagtgaggacctcgat
tcccccgtcttcctcgatgatttcccccaggaaggcaacaccaacatcaacaacgccaac
agcaacaactggctggaggggatggagtacgaggacgaggtgctgaggaagacggtgcca
gcagcacccaggcgtccagcacggaagcgcaactaccccttacccatggagagcctgcaa
cggaggccaagcaggaggcgaggggccacctctgggggtcacccatcatcagggctgcgc
cttctcccgcaggagctgcccagagaggatggcactgtgacgggaacggcgtccagctca
gggtaccagcagggtgaaagcggtgacccaagcacatcctccaccccggccatcaccttt
ctcattcaggaggctctgatctccgggggccttgcagctctggcccgtgacccatccttc
gtagcagtgaccagggacgagatggcggccagcaaccagctggagatggatgaagtggag
aaagcagccgtggagctgctaaagggaagagaaaccctgcagggtacaaaaactggctct
gccccccaggacaccttggccgcatcaccagccagctccccagggctcagtgcagccccc
tcccaaaagaccactgctgccactcgcctgtga
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