Gymnogyps californianus (California condor): 127026406
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Entry
127026406 CDS
T08687
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03013
Nucleocytoplasmic transport
gcl03015
mRNA surveillance pathway
gcl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127026406
09122 Translation
03013 Nucleocytoplasmic transport
127026406
03015 mRNA surveillance pathway
127026406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127026406
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127026406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
127026406
NCBI-ProteinID:
XP_050767590
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All DBs
Position
28:6529981..6543642
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AA seq
721 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAASAARSRSGSGSGSGSGSPRTPHRPPRGAAGA
LSSGPRGRGAESAAGGAAKSAPESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESA
KVELKQDSNDSCESAAKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLD
DDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPK
TRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGADSTS
APPRTFTNRSSAGTGRMPPPRNYPRMGGYKETRPSYRASEASVQHLSRNGEQVRQESNYR
AKRAEQTPPRDKSPEVEAAHVHSSPVKEEVALENQATAADAAQPPPDRPIEKKSYSRARR
TRIKAGDAGKLADEVPASEGLTPVPPKPVQAETSPPPAKSSNWESPVESSLDGLEQEMTQ
MNLTEQNWTPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQR
PPVPEPAPPMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPH
QTPAPMANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSN
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactcggcc
gcctccgacagcgccgactcggccgccagcgccgcccgctcccgctcgggatccggctct
ggctccggctccggttcaccccggacgccgcaccgcccgcctcgaggcgccgccggggcc
ctcagctctgggccgcggggccgcggggccgagagcgctgccgggggggcggccaagagc
gcgcccgagtccgagtgtgaaagcgaggatggcattgaaggagacgctgtactctcggat
tacgaaagtgcggaagactcggaggcagaggaagaggattacagcgaggaagaaagtgcc
aaagtggaactgaagcaggatagtaatgattcctgtgagtcagcggcaaaagcagagaaa
ggggatgagaaacctgactccaaaggtgctgtaactggtgagaggcaaagcggggacggg
caggagagcactgaacctgttgagaataaagttgggaaaaaagttcccaagcacctggac
gacgatgaggatcggaagaacccggcttacatcccgcgcaaagggctcttctttgagcac
gacctccgagggcagacgcaggaggaggaggtcaggccgaagggtcgtcagcggaagctg
tggaaggacgagggccgctgggagcacgacaaattccgggaggacgagcaggcccccaag
accaggcaggagctgatcgcgctttacggctatgacatcaggtcagctcacaaccccgat
gacatcaagccgaggaggatgcgcaaaccgaggtttgggagtcctcctcagcgagaccca
aactggtccaacgagaggccaaataagcccccgaggcaccaaggtgcagacagcacttcg
gctcccccacgaaccttcaccaacaggagctccgcaggtacagggaggatgcccccgcct
aggaactacccgaggatggggggctacaaagagacccgtccaagctaccgagcttcggaa
gcaagcgtccagcatctgtctcgaaacggcgagcaagtgagacaggagagcaactatcga
gcgaagcgcgcagagcaaaccccaccgagagacaagtcacccgaggtggaagcggcacat
gtccacagcagccctgtgaaggaggaggttgctttggaaaaccaagccacggctgctgat
gctgcacagccgccgccagacagaccaattgaaaagaagtcttattcccgggcaagaagg
accagaatcaaagctggggacgcggggaagctggcagatgaagtgcccgcttcggaaggg
ctgactcctgtgcctccaaaacctgtgcaagccgagacgtcccccccgccagccaagagc
agtaactgggagtcgccggtagaatccagcttggatggactcgagcaagagatgacccaa
atgaatctcaccgagcagaactggactccggggcagtctcagttcatacagccccgggag
ctgaggggtattccgaaccatatgcacgtgggaactgggccaccgcctcagtttaacagg
atggaggaaatggcagtgcagggcggccgagtgaaacgctactcgtcgcagcggcagaga
ccaccggtgccggagcctgccccccccatgcacatcagcatcatggaagggcactactac
gacccactacaattccagggaccaatctacacccacagtgagaacccggccccgctgccg
ccccaagggatgatcgtacagccagaaatgcacctccctcatccaggtttacatccccac
cagacgccagcccccatggcaaaccctgggctgtaccccccgccagtctccatgcccccg
ggccagcccccgccgcagcagctgctcgcaccgacttacttctcccctcctggagtcatg
aattttgggaatcctggctacccttaccccccgggagcactaccccctccgccccctcct
catctctattccaacacgcaggcccagtcccaggtgtacggcggggtcacgtactacaac
actgtccagcagcaagtgcagcccaagccttctccacctcgaaggacgtcccagcccgtg
actatcaagccgccgcctcctgaggacagcaaaggtgaaaaatcaaaggagaggagcaac
acgtag
DBGET
integrated database retrieval system
