KEGG   Gymnogyps californianus (California condor): 127026942
Entry
127026942         CDS       T08687                                 
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
gcl  Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:gcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gcl04131]
    127026942
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gcl04147]
    127026942
Membrane trafficking [BR:gcl04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    127026942
Exosome [BR:gcl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127026942
  Exosomal proteins of bladder cancer cells
   127026942
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd Aa-Ago_N
Other DBs
NCBI-GeneID: 127026942
NCBI-ProteinID: XP_050768199
LinkDB
Position
29:1222262..1243046
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCTVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDHNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
AAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPTMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFHGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctgaccaagttcgagactaagtcggcccgggtgaaagggctcagctttcaccccaag
cggccgtggatcctcaccagcctgcataatggcgtcatccagctgtgggattatcggatg
tgtacccttatcgacaaattcgatgagcacgacggacccgttcgaggtattgatttccac
aagcagcagcctctgtttgtttctggaggtgatgattacaaaataaaggtctggaattac
aaattgcgccgttgtctcttcactctcctcgggcacttggattatattcgcactaccttc
ttccaccacgaatatccctggatcttgagtgcttctgatgaccagaccattcgggtttgg
aactggcagtccagaacttgtgtttgtgtgctgacaggacacaaccactatgtgatgtgt
gcccagtttcacccctctgaggacctggtagtgtcagccagcttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaacctgtcccctggagctgtggaatcggat
gtaaggggaataacaggggtggatttgtttgggacaacagatgcggttgtgaagcacgtt
cttgagggccatgatcgtggggtgaactgggctgccttccaccctacaatgccgcttatt
gtgtcgggagctgatgatcggcaagtgaagatctggcggatgaatgaatcgaaggcctgg
gaggttgacacttgccgggggcattacaacaacgtctcgtgcactgtctttcacccgcgg
caggaacttatcctgagcaattcggaagacaagagcatccgtgtctgggatatgtctaaa
cgcacgggtgtccagacctttcggcgtgatcatgatcgcttttgggtattggctgctcat
cccaacctcaacctctttgctgcaggccatgacggtggcatgattgtgttcaaactggag
cgtgagaggcccgcttatgctgtgcatgggaacatgctctattatgtgaaggaccgtttc
ctccgccagcttgatttcaacagttcaaaagacgttgctgtcatgcagctgcgaagtggt
tccaagttccctgtgttcaacatgtcatacaacccagctgagaacgctgtccttctctgc
acaagagccagcaacttagagaacagtacttatgacctatacaccattcccaaggatgca
gactcccagaatccagatgcccctgaagggaaacgttcctccgggctaacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcattcgatcctaatcaaaaacctg
aagaatgagatcacgaagaaggtgcaggtgccgaactgtgatgagattttctatgctggc
acagggaacctgttactgagagatgcagactccatcaccctctttgacgtgcagcagaag
cgaactctggcctcagtgaagatctccaaggtgaaatacgtcatctggtcggctgacatg
tcccatgtagctctgctggctaagcatgccatcatgatctgcaacagaaagctggagtcg
ctgtgtaacatccatgaaaacatccgtgtcaagagcggtgcctgggatgaaagtggtgtt
ttcatctataccaccagcaatcacatcaaatatgccgtcaccacaggggatcatggaatt
atccgcaccctggacctgcctatctacgttacgcgtgtgaaggggaacaacgtgtactgc
ctggacagagagtgccgccccagggtcctcaccattgatcccacagaattcaaattcaag
ctggcattgatcaacagaaagtatgatgaggtgctgcacatggtgaggaatgctaagctt
gtgggccagtccatcattgcctacctgcagaaaaagggctacccggaggtggccctgcac
tttgtcaaggatgagaagacccgtttcagcctggcactggaatgtggcaacattgagatt
gctctggaagcagccaaagctctggatgacaaaaattgctgggagaaactgggagaagtg
gcattgctgcagggaaatcaccagattgtggagatgtgctatcagcgcaccaagaacttt
gataggctctccttcctctatctcatcactggcaatctggagaagcttcggaagatgatg
aagatagctgagatccgtaaagatatgagtggccactaccagaatgccttgtatttagga
gatgtggcggagagagtgaggatcctgaagaactgtgggcaaaagtccctggcctatctc
acggctgcaactcatggtctggatgaggaagctgaaagtctgaaggaaacctttgatcct
gaaaaggaaacgattccagacattgatcacaatgcaaagctgctgcagcctcctgctcct
gtcatgcctctggataccaactggccattgctgactgtctccaaggggttcttcgaagga
acgattgctagcaaaggcaaagggggtgccttggctgctgatattgatatcgacactgtt
ggcaccgaaggctggggagaagatgcagagctgcagctggatgaagatggctttgtggat
gctggagagggctttggagaggaaggtctaggtaaaggacaggaagaaggaggtggatgg
gaagtcgaagaagatttggatcttccccctgaactggatgttcctgctggtccggcagga
gcagcagaggatggattctttgtgccacccaccaagggcaccagcccagctcaggtgtgg
tgtaacaattctcagcttcctgttgaccacattctggcaggctcctttgagacagcaatg
agactcctccatgaccaggtaggggtaacaaactttggaccctacaagcagctgttcctg
cagacctatgcccgtggccgtacgacctaccaagccctgccgtgtctccctaccatgtat
ggatacccacatcgcaactggaaagaagctggcttgaagaatgccctccctgccgttgga
ctgaaactcaatgacctgatccaacgcctgcagctgtgctaccagctcactacggctggc
aagtttgaggaggccgtggagaagttccgctccatcttgctcagcgtgcccttgctggtg
gtggacaacaagcaggagatagctgaggcccagcagctgatagccatttgccgggagtat
attgtaggactctcaatggagattgagcggaagaagctgcccaaagagaccctggagcag
cagaagcgaatctgcgagatggctgcctatttcacccactccaacctgcagcccgtccac
atgatcttggtgctgcgtactgctctcaacctctttttcaaactcaaaaacttcaagaca
gctgctacttttgcccgtcggctgctggagctgggtccaaagcctgaggtggcccagcag
actcgcaagatcttgtcagcttgtgagaagaatcccactgacacctaccagctcaactat
gacatgcacaacccctttgacatctgtgccgcctcttaccgacccatctatcgtggcaaa
cccgtggagaagtgtccgctcagcggagcctgctactgccctgagttccatgggcagatc
tgccgcgtcactacagtgacggagatcggcaaagatgtcatcgggctgcgcattagcccg
ctccagttccgctag

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