Gymnogyps californianus (California condor): 127026986
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Entry
127026986 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127026986
Membrane trafficking [BR:
gcl04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127026986
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
PPR
DUF2464
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
127026986
NCBI-ProteinID:
XP_050768282
LinkDB
All DBs
Position
29:complement(2002766..2009952)
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AA seq
1495 aa
AA seq
DB search
MSDEKPPQLVDYFVVAGLTDTSRPLEEESQQHRPARPSEPITDVAVIIRSQGEEVPHGFT
CIETTTSGHPVDLNAGLLNNPQMFICYKRGRDKPPLIELGVHYEGKDRPKPGYKILDTTP
YSRSANLNSGGPGHQRTFLTYRRAAEPHGHNTLGVTDICLVMPSKGESTPHTFCRVDKNL
NTSMWGPALFLCYKIAMAKANTLVYEAGLLGRYPEQDSESFPLPESVPVFCLPMGATIES
WPADTKYPLPVFSTFVLTGASGDKVYGAAIQFHEAFPRERLSEKQSLRLGLLSVVDRRPV
AGRSLQTRKSICVLSHWPFFDVFRKFLMFIYRYSISGPHVLPLETHISHFMHNVPFPSPQ
RPRILVQMSPYDNLLLCRPVSSPLPLSGASFLTLLQNLGPDNAVALLVAVLTEQKLLIHS
LRPDVLTSVGEALVAMIFPLRWQCPYIPLCPLALADVLCAPVPFIVGIHSSYFDLYEPPR
DVIFVDLDTNTIFQSEERKLLSPRSLPRRPCKVLLASLHSLSQQLDEMYSGPGEEASLEL
LLSDAEAARGRRAQLELEARAAFLRFMACALRGYRSFLRPIAPAPAPAGRDAGSLFSLQG
FLKSRERAYHRFYGQLLRTQLFTQFIEDCSFASDRDPCLEFFDTCVDKVGAAGSTPRPCV
PVPRPGDPVPPPQVQAELEKPEDAPLMELDDPRGGEHTVFITPPEQPAGPDGAELPARYR
YDGFPTLRPELLEPPRDPLVAQLCQARSSAPSSPAPRRTKQEMKVAQRVAQKYSSVPDMW
AKCLLGHCYGLWFLYLPTHVRAAPAKLRALQLAYEVLRKMEAHKVVLPDEVCYRILMQLC
GQYGEPVLSVRVLLEMKRAGIVPNTITYGYYNKAVLESKWPAGTQGGRLRWAKLRNVVLG
AAQFRQPLRQRERRAAAPPPPGGRAPPAPRPSLQRQTTWAGRSLRDPXPGPRLVKSGSLS
FPGGTHGEGGRGGPGETPTTRPPLLPAALDPLPPRLRGPPGSADGSLSDVSFATDESDRA
DEGPAGAGGPAGGTPRRGLAAKLQQLLSPGKRPPLRPAASTELPAGPRDDDACPRRGSEQ
RDGEPPPRRSPAETLLRPRERPESTASESSVSLGSELDLSDTSVGSASIPKSSEPPADGA
TGQEPPAVEVLLSSCSRCQGCGALVYDEEVMAGWTSDDSNLNTTCPFCGRSFVPFLSIEI
QDFQLPPRXDPPGPAGPCAPPCPPSFGRNPHGPVLSDRRRCLALDEAEPELCNGCPDAAV
PRRSERVAFAYLSPLVLRKELESLVENEGGEFLAQPELVDSHPIIYWNLVWYFQRLGLPS
NLPRLLLGSQHVTPVPQPPDSPCVRVRLLWDVLAPEPDSCPPLYVLWRLHSNVPTRLRSW
RPHGHPFSLAFLEAVLSHVGLSEVHKAIALFLEMLAAPGGPWHLQRSIYREILFLTLAAL
GRDHMDIAAFDKKYKSAYNKLAGSLGKEELRRRRAQPPSSKAIDCRKSFGATLEC
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagaagcccccgcagctggtggactactttgtggtggccggactgacggac
acctcgaggccgctggaggaggagagccagcagcaccgcccggcccgccccagcgagccc
atcaccgacgtggccgtcatcatccgctcgcagggcgaggaggtgccccacggcttcacc
tgcatcgagaccaccacctcaggccaccccgtcgacctcaacgccgggctgctcaacaac
ccccagatgttcatatgctacaagcggggccgggacaagccccccctcatcgagctgggg
gtgcactacgagggcaaggaccgcccgaagccgggctataagatcctggacacgacgccc
tacagccgctcggccaacctcaattcgggggggccgggacaccaacgcaccttcctgacg
taccggcgggcggccgagccccacggccacaacacgctgggggtcactgacatctgtctc
gtcatgcccagcaagggcgagagcaccccccacactttctgccgggtggacaagaacctc
aacaccagcatgtggggccctgccctgttcctgtgctacaagatcgccatggccaaggcc
aacacgctggtctacgaagcagggctgctgggacgttaccctgagcaggacagcgagtcc
ttccccctgcccgaatcggtgcccgtcttttgcctgcccatgggggccaccatcgagagc
tggccggccgacaccaagtacccgctgcccgttttctccaccttcgtgctgaccggcgcc
tcgggcgacaaggtgtacggggcggccatccagttccacgaagcgtttccccgggagcgg
ctgtcggagaagcagagcctgcgcctggggctgctgagcgtggtggaccgacggcccgtg
gccggccgctcgctgcagacccgcaagagcatctgcgtcctctcccactggcctttcttc
gacgtcttccgcaagttcctcatgtttatctaccgctactccatctcggggccccacgtg
ctgcccctcgagacgcacatctcccacttcatgcacaacgtccccttcccgtccccgcag
cggccgcgcatcctggtccagatgtccccgtatgacaacctgctgctgtgccgacccgtg
tcctccccgctgccgctcagcggcgccagcttcctgacgctgctgcagaacctgggcccc
gacaacgcggtggcgctgctggtggccgtgctgaccgagcagaagctgctcatccactcc
ctgcgtcccgacgtcctgaccagcgtgggcgaagccctggtggcgatgatcttccccctg
cgctggcagtgcccctacatcccgctgtgcccgctggcgctggctgacgtgctgtgtgcc
cccgtgcccttcattgtaggcatccattccagctacttcgacctctacgagccccccagg
gacgtcatcttcgtcgacctggacaccaacaccatcttccagagcgaggaacgcaagctg
ctctccccccgctccctgccccgccgaccctgcaaggtgctgctggcctcgctgcacagc
ctctcccagcagctggatgagatgtacagtgggccgggggaagaagcgtcgctggagctg
ctgctgagcgacgcggaggcggcgcggggccgacgggcgcagctggagctggaggcgcgg
gcggctttcctgcgcttcatggcctgcgccctgcggggttaccgctccttcctgcgcccc
atcgccccggcgcccgccccggccggccgagacgccggcagcctcttctccctgcaaggg
ttcctcaagtcccgggagcgggcgtaccaccggttttacgggcagctgctgcgcacccag
ctcttcacccaattcatcgaggactgctccttcgccagcgaccgagacccctgcctcgaa
tttttcgacacctgcgtggataaggtgggtgccgccggctccacgccgcgtccctgtgtc
cccgttccccgccccggtgaccccgtgccccctccccaggtgcaggcggagctggagaag
ccggaggacgccccgctgatggagctggacgacccgcgggggggcgagcacaccgtcttc
atcaccccccctgagcagccagcgggtcccgacggcgccgagctgcctgcgcggtaccgc
tatgacgggttccccaccctgcgccccgagctcctggagcccccccgggacccgctggtg
gcccagctatgccaggccaggagcagtgcccccagcagcccggccccacgcaggaccaag
caggagatgaaggtggcccaacgcgtggcccagaagtattcctcggtgcccgacatgtgg
gccaagtgcctgctggggcactgctacgggctctggttcctctacctgcccacccacgtc
cgcgccgcccccgccaagctgcgggcgcttcagctggcctacgaggtcctgcgcaagatg
gaggctcacaaagtggtgctgccggacgaggtctgctaccgcatcctgatgcagctctgc
gggcagtacggggagccggtgctgtcggtgcgggtgctgctggagatgaagcgcgccggc
atcgtgcccaacaccatcacctacggctactacaacaaggcggtgctggagagcaagtgg
ccggcgggcacccagggcgggcgcctgcgctgggccaagctccgcaacgtggtgctgggg
gctgcccagtttcggcagcccctgcggcagcgggaacgccgggccgccgcgccgccgccg
ccaggcggccgagcccccccggcgccccgtcccagcctgcagcggcagaccacctgggcc
gggcgcagcctgcgggaccccnnccccggcccccggctggtgaagagcggcagcctcagc
ttccccggtggcacccacggtgaggggggccggggagggccaggggagaccccaactacc
cggcccccccttcttcccgcagccctggacccgctgcccccccgactgcggggtcccccc
ggctcggccgacgggagcttgtcggacgtcagctttgccacggacgagagcgaccgggcg
gatgaggggccggcgggcgccggggggccggcggggggcacgccgcggcgggggctggcc
gccaagctgcagcagctgctgtcccctggcaagcggcccccgctccggccggccgccagt
accgaactccctgccggcccccgggacgacgatgcctgcccgcgccggggctccgagcag
cgggatggggagcccccgccgcgccgcagccctgccgagaccctgctgcgcccacgggag
cgccccgaatccaccgcttccgagagctccgtctcgctgggcagcgagttggacctgtcg
gacacgtcggtgggcagcgccagcattcccaagtcctccgagccgccggctgatggggca
accgggcaggagccgcccgccgtggaggtcctgctgtccagttgctcgcggtgccagggc
tgcggcgcgctggtgtacgacgaggaggtgatggccggctggacctccgatgactccaac
ctcaacaccacctgccccttctgcggccgctccttcgtccccttcctcagcatcgagatc
caggacttccagctgccccccaggtaggatccccccggcccagcgggaccctgcgcaccc
ccgtgtcccccatccttcgggagaaaccctcatggaccggtgctcagcgaccgccgccgc
tgcctggccctggatgaggccgagccggagctctgcaacggctgcccggatgcggcggtg
ccgcggcggtcggagagggtggctttcgcctacctgagcccgttggtgttgcggaaggag
ctggaaagtttggtggagaacgaaggcggcgagttcctggcgcagccggagctggtggac
agccatcccatcatctactggaacctcgtctggtacttccaacgcctggggctgcccagc
aacctcccccgcctgctcctgggctcccagcacgtcaccccggtcccgcagccccccgat
tccccctgcgtacgcgtacgcctgctttgggacgtcctggcccccgagcccgacagctgc
cccccgctttacgtcctctggcggcttcacagtaacgtccccacccggctgcggtcctgg
cggccccacggccaccccttctcgctggccttcctggaggccgtgctgagccacgtgggg
ctgagcgaggtgcacaaggccatcgccctcttcctcgagatgctggcggctccgggcggc
ccctggcacctgcaaaggagcatctaccgggaaatcctcttcctcacgctggcggcactg
ggcagggaccacatggacatcgccgccttcgacaagaagtacaagtcggcctacaacaag
ctggcggggagcctgggcaaggaggagctgcggcggcggcgggcgcagccccccagctcc
aaagccatcgactgccgcaagagcttcggggccaccctcgagtgctag
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