Gymnogyps californianus (California condor): 127027093
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Entry
127027093 CDS
T08687
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127027093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127027093
03036 Chromosome and associated proteins [BR:
gcl03036
]
127027093
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127027093
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
127027093
Chromatin remodeling factors
BAF complex
127027093
PBAF complex
127027093
GBAF(ncBAF) complex
127027093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
127027093
NCBI-ProteinID:
XP_050768446
LinkDB
All DBs
Position
Z:complement(55122161..55244272)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQIHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHTMSGAATGP
GPAPGMPGHTAAVTPKTWTEGQAPDLSVSNAQQKLPAPPPSGRPSPAPPAAQPAAAMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEDD
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctaggacctagcccaggaccagggccatctcctggctcagtt
cacagcatgatggggccaagtcctggtccgcccagtgtcccgcatccaatgccaacaatg
gggcctactgattatccacaggaaggcatgcaccaaatccataagtctattgatggcttg
cacgaaaaaggaatggttgaagacgttcattgtggctccatgaagagtatgcgacctcct
caccctggaatgggcccgcctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccgtctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaactccaccccagatgactcccagccagccaggacccattataccaggagacccacaa
gttatgaatcaacctaacagaggtccttcccctttcagccctgtacagctgcatcagctg
cgggctcagattctagcatacaaaatgttagctagaggtcagcctttaccagaaaacctc
cagcttgctgttcagggcaagaggaccctgccgggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattgggttacatacaatgagtggtgctgcaactggacca
gggcctgctccagggatgcctggacatacagctgccgttacccctaaaacttggactgaa
ggccaagccccagatctgagtgtctccaatgcgcagcaaaagcttccagcgccaccccct
agtgggaggccttctcctgccccccctgctgcccagcctgctgctgccatgcctgggcct
tctgtaccacagccaccacctgggcagccttcacccattgttcagctgcagcaaaagcag
aatcgcatcagccctatccagaaaccgcaaggattggatcccgttgaaatactccaagaa
cgtgaatacaggcttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccagcgccagctaagacaagaggtagtagcctgcatgcgtcgtgacacaaca
ctggagacagcactgaactccaaagcctacaaacgaagcaagcgccagactttgagggag
gcccgtatgacagaaaagcttgagaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcatcaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagtcgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgagcgtgagcagaaaaaagaaactgaaagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgc
ctggcctacctattgcagcagacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaagcagccaaggagaagaagaagagaaggagaagaaagaagaag
gctgaagaaaatgcggaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcaaatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggacccgaagcaccaaaagcaagtcagctggatgcttggctggaaatgaacccc
ggctatgaagttgctcccaggtcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgatgaagaagaatcaagcaggttagaagcagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcacgcgatcacagaaagggtggaaaagcagtcttctcttcttattaatggcacacta
aaacattatcagctccagggactggaatggatggtttcactctataataacaatctgaat
ggaattttagctgatgaaatgggactaggaaagacaatacagactattgcactcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctttcgact
ttatccaattggacatatgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccggtcactcgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcga
tggaaatacatgatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctaggcgaatactgctgactgggactccgttg
cagaacaaattacctgaactttgggctcttctcaatttcctcctcccaaccattttcaag
agctgtagcacctttgaacagtggttcaacgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgctccgaccc
ttcttgctgagaagattgaagaaagaggttgagtctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcagaagatcctgtaccgtcacatgcaagctaag
ggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggggcaaaaact
ctaatgaacaccatcatgcagttgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtcgtttgctgaacatttaggatactcaaatggtgtcatcaacggagccgaa
ctttatcgagcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcctttcgaaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctgggtcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttatcatcttt
gatagtgactggaatcctcaccaggacttgcaggcccaagatagagctcaccgaattggt
cagcagaatgaagttcgagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgctgcaaagtataagctgaacgtagatcaaaaagttattcaggctggaatgttt
gatcagaaatcttcaagccacgaaaggagagccttcctacaggctatactggagcatgaa
gaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggaccgtcgcagggaggat
gccagaaacccgaagcgtaagccccgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacgtgtgaagaagaagaagagaaaatattt
ggaagaggatcccgtcaacgcagggatgtggactacagtgatgctctcacagagaaacaa
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aaacggaagagacgaagaaatgtggataaagattctgggaaagaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcacccaacccacccaaactgaca
aaacaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccatctaggaaagaattaccagaatattatgaattg
attaggaaaccagtggacttcaaaaagataaaggaaagaattcgcaaccataagtatcgg
agtcttggagacttggagaaagatgtcatgttgctgtgtcacaatgctcagacattcaat
ttggagggatcacagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagattgccaaagaagaagaaagcgaggatgaaagcaatgatgatgaagatgat
gatgaagaggaagaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagctaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagccgagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
