Gymnogyps californianus (California condor): 127027129
Help
Entry
127027129 CDS
T08687
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gcl00536
]
127027129
Glycosaminoglycan binding proteins [BR:
gcl00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
127027129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Dam
Motif
Other DBs
NCBI-GeneID:
127027129
NCBI-ProteinID:
XP_050768575
LinkDB
All DBs
Position
1:124238613..124295230
Genome browser
AA seq
1430 aa
AA seq
DB search
MFGFIWKIFLCLPVLGMIKGDLQIVAAEGYSAAEGGQAEDGSPTPQLSGWQLANPSLPPE
LKKLNGIVEAEQVNKHLLLRRKRSILFPSGVKICPDESVEQAIANHLKYFRLRVCQETVW
EVFKTFWDRLPEREEYHTWMSLCEEGTMSIFEMGMNFSQSEEHRSLIVKKLSYTKEAMGS
SCTDWSCGQGGPGHRSCSGTPTPASDADVTTLRDAAAHVPPPHEISAESPVGGTVHEIED
AGTTINNEIKKQDEKLVRPVTEQTIEFSILIVGEKYSEELSDPAAGKHQLLSEQFISQIK
SVFEGLPGYKNIQVLDYSSPEEDSGVEVRYAVTFDGKPISNATWDLINLHSNKVEDNSFM
GIEDNPTVVYTISDFRDYIAEILQKNALLENTSLSLDPNSLQLTNVKEILHPTPEDPSWI
TEHPVVLERPEFDDSTYLAERPSADESTVSNTLPFDFAKPDSTSDSEQSNDNEIRPRPEN
LDSEASLAPEAPLSSEADVTSLPDGLNLEDGNRTPHLVTAPMLERDSVDSLEWLSAPTSL
DDTGLSEDLLPSSPPHLVPKELLSTDDYAVPLLSAPTVASSSVIETDIKETVSAEKEEIT
QGSPAGSNNAESVLHESVEEIHFPLEVHPMEDETDIYLGDRVIYDDGSGSAFDGSGKEME
SSIWPWEEATLEPVFYPGPDSWLEDDNESLLIRTEDIPEGVILDYILNSRNKLDDPSKDE
NEGMANIKEDLLDESEIFVFPETTSQQVPLLQTEEPSSVEPSTQTETLGMYDSSFVKPSL
VLEPSVDHSFVDMPTGEAPVSPHNTGLSVEDSLLTSTGTVSMEQPKESGVGQNIISEAAE
HQNEDRTTVEELFTVEQADVTEAATIGHLGTSSSETILTADPSTVNPDASMVNTDASTEE
QQTLDSSLAGQGTTGSAVKKPADVWPTDRALENSLDQTVRSATPAATEVSTAVPSVTDQT
TVLQGFAGQSGTDHDTHVSMSSSTAMNSYVTMSVTTSTVELPSHLPPVGSTASSSVATST
KLGDETTRVLDVSVDLDRVSTVRFSPELTEEGRSMTESHVELTTHVQSTEMASVAWATHE
NRSSTPVPSRALVVFFSLRVTNMMFSEDLFNKNSPEYKALEQRFLELLVPYLQSNLTGFQ
NLEILNFRNGSIVVNSRMKFAKPVPRNVTNAVYMILEDFCNTAYHTMNLAIDKYSLDVES
GEQADPCKFQACNEFSECLVNRWSGEAECVCNPGYLSIDGLPCNSVCNLQPNFCLNDGKC
DISPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASAVVFFLARTL
RDQYTKSDTEDSQGQGDSLSSIENAVKYNPMYESDTTGYSHYYRRYPQLTSYSSTSAETS
TDYSSEEIRHIYENSELTKEEIQDRIRIIELYAKDRQFAEFVRQHQMKLL
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcttcatttggaaaatctttctttgccttccggttttgggaatgattaaaggc
gatcttcaaatagttgcagcggaaggttattcagctgcagaaggaggacaggctgaagat
ggttcaccaacccctcagctcagtggctggcagttggcaaacccttctctgcctcctgag
ttgaaaaagcttaatggcatcgtggaggctgaacaggtcaacaagcatttgctgttacga
aggaagcggtccattctgtttcccagtggagttaagatctgccctgatgaatctgttgag
caggctattgccaaccatctgaaatatttcaggctcagagtgtgtcaggaaacagtctgg
gaggtcttcaagacgttctgggatagactgccagagcgtgaagaatatcacacctggatg
agcctgtgtgaggaaggaacgatgagcatctttgaaatgggcatgaacttcagtcagtct
gaggagcaccggagtctgattgtgaagaaactgtcctatacaaaggaagcaatgggcagc
tcctgcactgattggtcatgtggccaaggtggtccagggcatcgctcatgcagtgggact
ccaactccagcttcggatgctgatgttaccacattgagagatgcagctgcccatgttcct
ccccctcatgagatctctgctgagagtcctgtgggtggtaccgtccatgagatcgaagat
gcaggcactactatcaataatgagataaagaagcaggatgagaagctagtgagacctgta
actgagcagacgattgagttcagcattttgattgttggtgaaaagtacagtgaggagctg
agcgacccagctgctgggaagcatcaactgctttctgaacaattcatttctcagatcaaa
agtgtatttgaaggactacctggatacaaaaacatccaagtcctggattacagctctcct
gaagaggacagtggggtggaagttcgctatgctgttacgtttgatggaaaacccatcagc
aatgccacctgggacctgattaaccttcattccaacaaggtggaggacaactcctttatg
ggcatagaggataatccaacagttgtgtacaccatcagtgatttccgagattatattgct
gaaatcctccagaaaaacgccttgcttgaaaacacttccttgtctttagaccctaactct
ctccagcttactaatgtgaaagaaatactacaccctacaccagaagacccatcctggatt
actgagcatccagttgtgctggagcgcccggagttcgatgacagcacctatttggctgaa
cggccttcagcagatgaatcaactgtcagcaataccttgccctttgatttcgctaaacca
gattccacttcagatagcgaacagtccaatgacaatgaaatccggccaagaccagaaaat
ctggactctgaggccagcttggcacctgaagctcctctctcttcagaggctgacgtcact
tctttgcctgatgggctgaatttagaggatgggaatcggactcctcatttggtcactgca
ccaatgttagagcgtgattctgtggactctctggaatggctttcagcccccacttcttta
gatgatactggtctatctgaagaccttttgccttcaagtcctcctcaccttgtgcctaaa
gaacttctatctacagatgattatgcagttcctctgctttctgcaccaacagtggcctct
tcatcagtcatagagactgatattaaagaaacagtatctgctgagaaggaagaaataact
caaggtagtcctgcaggcagtaacaatgcagagtctgtgttgcatgagtctgtggaagaa
attcattttcccttggaagtacaccctatggaagatgaaactgatatatatcttggagat
agagttatatacgatgatgggtctggttcagcttttgatggttcaggaaaagaaatggaa
tcaagtatttggccttgggaagaggcaacactggaaccagttttctaccctggtcctgat
agctggcttgaagatgacaatgagtctttgttaatcagaactgaagatattcctgaaggc
gtgatcttagactatattcttaactctaggaataaattagatgatccttccaaagatgag
aatgaaggtatggccaatataaaagaagatctcctcgatgagtctgaaatatttgtcttt
ccagagactacaagtcagcaggtacctctgttacagacagaagagccatcatctgtggaa
ccatctacacagacagaaacactgggcatgtatgattcttcttttgttaaaccatcgttg
gttttggagccttcagtggaccattcctttgtagacatgccaactggagaggcccctgtc
tcaccgcacaatacaggtctgtctgtggaagatagtctccttacatctacagggaccgtc
agtatggagcaacctaaagagtctggtgtaggtcagaacatcatttctgaagcagctgaa
catcaaaatgaagacaggacaacggtagaagaactattcacagtggagcaggcagatgta
actgaagctgctacaataggccacttgggcacaagctcttcagaaaccattctgactgca
gatccttccacggtaaaccctgatgcttccatggtaaacactgatgcttccacagaagag
cagcaaaccctagattcatcattggcaggccaaggcactactggatcagcagtgaagaaa
ccagctgatgtttggcctactgacagagcactagaaaactcattagatcagacagtgcga
tcagcaacgccagctgccactgaagtttcaactgcagttccttctgtaacagatcagacc
actgttctacagggctttgctggacagagtggtacagaccatgacacgcatgtttccatg
agctccagcactgctatgaactcttatgtaacgatgagtgtaacaacaagcactgttgag
cttccatcccatctccctcctgtgggatccacagcgtcatcgtctgtggctacctcaaca
aagctgggagatgaaacaacaagagtcctggatgtttcagtggacctggatcgtgtgagc
actgtccgcttttctcctgagctgactgaggagggaaggagcatgactgaaagtcacgtg
gagctaacaactcatgtccagtccacagagatggccagtgtggcttgggccacacatgaa
aatcgcagtagtactcctgtcccatcacgagctctagttgtgtttttcagtcttcgggtt
accaacatgatgttttcagaggacctgtttaataaaaactcccctgaatacaaagctttg
gagcagcgattcttggaactgctggtgccctaccttcagtcaaatctgacgggcttccag
aatctggaaatcctgaacttcagaaatggcagcattgtggtgaacagtcgaatgaaattt
gccaaacctgtgcctcggaacgtcaccaacgctgtgtacatgatcctggaagacttctgc
aacactgcgtatcacaccatgaacctggctatcgataaatactccctggatgtggaatcg
ggtgagcaagcagatccctgcaagttccaggcctgcaatgagttctctgaatgcttagta
aatcgctggagtggggaagctgagtgcgtctgcaatcctggctacctaagcatcgacggg
ctgccatgcaatagcgtttgtaatctgcagccaaacttttgcctgaatgacgggaagtgc
gacataagccctgggcaaggggccatctgtaggtgtcgtgtgggagagaactggtggtac
agaggggagcactgtgaagaatacgtatctgagccactggttgtgggtattgcaattgct
tctgtggcaggattcctgcttgtggcgtctgctgtcgtcttcttcttggccaggaccctt
cgagaccagtacacaaagagcgacaccgaggactcacaagggcagggtgacagcctctcg
tccattgagaacgcagttaaatacaaccccatgtatgaaagtgatacgactggctacagc
cattattaccggagataccctcagctaacatcctacagttctaccagtgcagagacatcc
acagactacagcagtgaagagatcaggcacatttatgaaaacagtgagcttactaaggag
gaaattcaggacagaattcgaattatagagctctacgctaaagaccgtcagtttgcagag
tttgttaggcagcatcaaatgaagctgctttaa
DBGET
integrated database retrieval system
