Gymnogyps californianus (California condor): 127027262
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Entry
127027262 CDS
T08687
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127027262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127027262
Enzymes [BR:
gcl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
127027262
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
127027262
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
127027262
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127027262
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
127027262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
FtsK_SpoIIIE_N
zf-FCS
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
127027262
NCBI-ProteinID:
XP_050768823
LinkDB
All DBs
Position
Z:complement(15703693..15715063)
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AA seq
350 aa
AA seq
DB search
MRVCWLVGKEKCSQRMKLPHLEAVVIGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQI
GVNPTSVDLVNIGKDEEVKMKPGQVLHIVNKLYPYMVQFAEESGKTVTEAEEKIQTKKTP
CRNSCENDDVELVPRKTMKMEVVDTQGSSANPKLSNSGVSPHEGTSSKKEHLGHWSQGLK
SSMQDPKMQVYKDEKTVVIKDKYPKARYHWLILPWDAISSLKSVTRDHLQLLEHMHAVGQ
KMIEQCPARESLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSQD
VIEMVRSKGKVMVKDHVSELLKLPLRCHHCKQQLSTIPQLKEHLRKHWPK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgtgctggctcgtggggaaagagaaatgcagtcagcgaatgaaactgccacac
ttggaagcagtggtaattgggcgtggcccagagactgggataacggataagaagtgttca
cggcagcaagttcagttaaaagcagactgtaacaaggggtatgtcacagttaagcagata
ggagtcaacccaactagtgttgatctcgtgaatattggcaaggatgaagaggtgaaaatg
aagccaggccaagttctgcatatcgtgaataaactttacccctacatggtgcaatttgct
gaagagtcagggaaaactgttacagaagcagaagagaaaatacaaaccaagaagacgcca
tgcaggaactcctgcgagaatgatgatgtagagcttgtgcccagaaaaacaatgaagatg
gaggtggtggatacacaaggcagttctgcaaatcccaagctaagcaatagcggtgtatcg
ccacatgaaggaacttcgagcaaaaaggaacacttaggacactggagtcagggtctaaag
agctccatgcaagatccaaaaatgcaggtttacaaggatgaaaagactgtagtcatcaag
gataaatatcccaaagcacgttaccactggcttatcttaccatgggatgccatttcaagc
ctgaagtcagtcaccagggaccatcttcaactcctggaacatatgcatgcagttgggcaa
aaaatgattgaacagtgccctgccagagagagtctggagttcagactgggttaccatgct
atccccagtatgagtcagctacatttgcatgtaatcagccaggattttgattctccagcc
ctgaaaaccaaaaagcactggaactcttttactacagactacttcttaaactctcaagat
gtgatagagatggtaagaagcaagggaaaagtgatggtgaaagatcatgtctctgaactt
ctcaaattgcccctcagatgccatcattgcaaacaacagctgtccactatcccgcagtta
aaggaacatctcaggaaacattggccaaaatga
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