Gymnogyps californianus (California condor): 127027283
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Entry
127027283 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127027283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gcl04091
]
127027283
Lectins [BR:
gcl04091
]
C-Type lectins
Lecticans
127027283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
127027283
NCBI-ProteinID:
XP_050768862
LinkDB
All DBs
Position
Z:49789581..49852362
Genome browser
AA seq
2183 aa
AA seq
DB search
MKPFEKSWLFLLLPIVVRVVRSSFISVNLGVKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVMLRLYRFTETETFIETF
MLHVQLLEPDCNIIKMRSGALEVPEYYGLSRVIDKNVLAFDYDRKINLNCTISLASLETH
LPAHGQLVTGEVQLRGDQPQSFFPGPKHSLGQQCRNGSCMLGLGVVHNTRMSCEEFLRMG
IRYHHLDSPSPDTDYIPVRLDLTDSRSKTLHKTEYAWLPVQIKGAVPNQIPKAAPMAKFI
LEVDQFILTPLTTTTIDAEDNETPKSLLVFNVTKPPPWGFITHLSDHTKAVGSFTWKDLS
DMLIAYQPPNNSHTERRNYEVEFEVHDFYFEKSLPITVHLSIRTTDTNAPRVSWNTGLNL
LEGQSRPITWQHFQIVDNDDIQNVRLVTVDGLQHGRLTVRGGKGFMFTVSDIQAGVVHYH
HDDSDSTKDFVVFRIFDGPHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQTILIESSM
LHASDMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYSVSSFLQRDLFSGIIYYRHLGGE
VFEDSLEFVLCDSHDPPNLSEPQVMMVHITPVDDQLPREAPGVTRHLVVKETEIAHLTKK
HLYFIDVEEQDRELTYTITTSPFFSCTQGHSDAGKLFMVDTIPKLVKDPAALALRSFTQH
AVNYMKVAYMPPLQDVGPEPQHVQFIFSVSNQHGGTLYGVCFNITILPVDNQAPEVFTSH
LRVEEGGLSPVTEGHILISDVDTKRELLLLLLQRQPQHGAMELDGIPMNEGDRLSCGDLR
TLAVRYRHDGSETLTDDVLFAATDGIHFVEFILQVKVLPVNDEPPVMRSGLVPVLHCLEG
EEVVLSSEYIYATDADSDDMKLMFMLARQPYHGVVRKAAIAVDRFSQADVISGLVTYKHT
SGEIGLTPSIEILTFVVSDGEAGPDVKDCCYDGPLPPPTPLHNPFPVYDLNITVLPVDNQ
PPSIATGTRFVVEEGSSAALTTNHLFATDPDTTADDLEFVLVSPPQFGYIENILPSPGFE
KSNIGISIASFQLKHLKALNINYVQARHVRMEPTADHFVLYVTDGLHRSAETPFFVLINP
TNDEVPEFIARNITVQEGEMKELDLSVINAVDLDVPQDRLVFGVVQRPWYGFLINGVHGN
DILRYKQLINHDHHSHGLLVHDFSMELLKNGMKLMYMHDNSENFTDSFKIQLSDGKHKVL
RTISVKIIPVNDEKPVLSKKDDIEVNMGETRIISSAVLSVEDKDTPRERIYYLFERLPEN
GQLQLKVGQGWITLQTGMKCTQEELDMNLVRYVHTGAIGSKNQDSFTFYLWDGYNRSPAV
DFYINIKDMEKGDIAVFIKPLRVPKXDRGYITTDVLLALDGTDKPEELLYVITSPPQYGQ
IEYVSYPAIPITSFSQMDVARQIVCYVHNAKAVVPEDTFRFIISNGLRTKHGTFMISLEA
VDQALPTLSRNTGLRLVEGAMALLSPDVLQLSDPDTAKENLTFLLAQLPQYGDLYYQGAV
LLQYNFTQQDVDNRDVAYKHGGGDSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTIQVD
HLDKMAPKIIHLHCFSDVELLKNGNYGIYITAKSLKASDPNTEDDKIIFKILQGPHYGYL
ENITTGGFIQEKFSQKDLNSKIILYVINPSREVNSDNLEFQVTDASGNSAVPQRLELRWS
RIEMQQTEYEVCENVGVVSLKITRAGHSADSAFIAVKVNEISAMLGKDFTVTPSKLVQFD
PGMSTKMWNIAITCDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSYSHSS
GQNKHNFWGRGMLFPVSPGSSSPSRPGNAPLEGIPLPPSKGMREHGGDVRQKHGLANRSR
TRLRVTGNGRIVHPSSVFRNGTDVVFKYHGMVSLKIEDDTSSAKANKKAQVSVINRAQQQ
INVVSSRKTEIPQADKAELASEPSSTHQDLYSFPKACTPDLKGLLHYEESTQKLFQCDGI
IWKFWNSQSKEVSMKKCPSGWSHHEGSCYFLVVNHKVTWNTAAQACREQYLGNLASVVNE
QHMQWLWDFSGRKPFWIGLNDQVNPGRWEWNGGEPVTYINWRRGSYHFPKRGRNCVLVQK
RGKWQATDCRKVKRNSYICSRKL
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaagctggttgtttctactgctgcctattgtagtaagagttgta
cgctcctcctttattagtgtcaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccccagagagaaggatgtctgcaaagtagaa
gttgtgattaatgagccaataacacagagagttgggaaactaactccacaggtttttgac
tgtcacttccttcctaacgaagtcaaatatacccacaatggctgtccgattttagatgaa
gacacggtcatgcttaggctgtacaggtttacagaaacggaaacgtttatagaaacattc
atgctccatgtgcagttacttgagccagactgtaacatcatcaaaatgcgctccggtgcc
ctggaggtccctgagtactatggtctgtccagggtgattgacaagaacgtcctcgctttt
gactatgaccggaagataaatctgaattgcaccatttccttagcctctttggaaacccac
ctgcctgctcacggccagctcgtcaccggggaagtgcagctgcgtggagatcagccacag
agcttcttccctggccctaagcacagcctgggccagcagtgcagaaatgggagctgcatg
ctgggactgggagtcgttcataacacaagaatgagctgcgaagaatttctgaggatgggg
attcgatatcaccaccttgactctccctcgcctgacaccgattatattcctgtgaggctg
gatctcacagacagcagaagcaaaactctgcacaagacggagtatgcatggctccctgtt
cagattaaaggtgctgttcccaatcaaatacccaaagctgccccgatggcaaagttcatc
ctggaagtagatcaatttattttaaccccccttacaacaacaaccattgatgctgaagac
aacgaaactccgaagtccctgcttgtattcaacgtcaccaagccacctccatggggcttc
atcactcatctatccgaccatacaaaagctgttggctccttcacgtggaaagatctcagt
gacatgctcattgcctatcagcctccaaataacagccacacagagaggaggaattatgag
gtggagtttgaagttcatgacttctactttgaaaagagtttaccgatcactgtgcatctt
tctatcagaacaacagatacaaacgctcctcgggtttcatggaatacaggcctcaatctc
ctggaagggcaatcccgaccaatcacatggcaacacttccaaattgtagacaacgacgac
atccaaaatgttcgcttggtcacagttgatggcttacagcatgggcggctcacagtgaga
ggagggaaaggattcatgttcacagtctctgacattcaggctggagttgttcactaccat
catgacgacagcgattctactaaggactttgtagtattcaggatttttgatggcccccac
agtattcgccataagtttccaatcaatatcctccctaaagatgacagccctccatttctt
atcagcaatgtggtcattgaagttcatgagggacagacaatcctgattgagagctccatg
cttcatgcttctgacatggattccagtgatgattacatactattcaatattaccaagcca
ccacaggctggagaaatcatgaagaaaccaggaccaaacttgatagggtattctgtcagc
agttttcttcagagggatctatttagtggaataatttattatcgtcatttgggaggagaa
gtatttgaagattcccttgagtttgtgctatgtgatagccatgaccctcccaatctctca
gagccacaggtgatgatggtgcacattacccctgtggatgatcagctacccagagaagcc
ccaggagtgacccgtcacctggttgttaaggagactgagattgctcacctaactaagaaa
cacctctacttcatagatgtggaagagcaagacagggaactcacatacaccataaccact
tccccatttttctcttgcacacaaggccactcggatgctgggaagctgtttatggtggac
accatccccaagctggtcaaggatcctgctgctcttgcactgcggtcatttactcagcat
gctgtgaactatatgaaagttgcctacatgccaccactgcaggacgttgggcctgaacct
cagcatgtccagtttattttttctgtcagcaatcagcatggtggcactttgtatggggtc
tgctttaatattacaattcttcctgtggacaatcaagccccagaggtttttacaagccat
ttgagagtggaagagggtggcctgagccctgtcacagagggacacattctcatctctgac
gtggacacgaaacgggagcttcttctcctcctcctgcagagacagcctcagcatggggcg
atggagctggatggcattcccatgaatgaaggcgacaggctttcctgtggggacctgcgt
accctggcagtcaggtatcggcatgatggctctgagactctcactgatgatgtcctcttt
gcagccacagatggcatccactttgtagagtttatcctgcaggtcaaggtgttgcctgtg
aatgacgagccacctgttatgcggtcaggccttgttcctgtgctgcactgcctggagggt
gaagaagtggtcctctcctcggagtacatttatgccacagacgcagacagtgatgacatg
aaactgatgtttatgctggctcgacagccctaccacggcgtagtgaggaaagctgccatt
gctgtggatcgcttctcccaagctgatgtcatctctggtttagtcacatataagcacact
agtggggagattggcctgactccttccattgagatcttaaccttcgttgtctctgatggt
gaggctggcccagatgtgaaagactgctgttatgatggacctcttcctcctccaactccg
cttcacaatccatttccagtatatgaccttaacatcactgtacttccagtggacaaccag
cctccatcaattgcaactggtacaaggtttgtggtggaggagggctcctcagcagccctt
accaccaaccatttgtttgccactgaccctgacaccactgcagatgacttagagtttgtc
ttggtttctcctccccagtttggttacattgaaaatatactgccttctcctgggtttgag
aagagcaacattggtataagtatagcttcgtttcagctaaagcacctgaaagccctgaac
ataaactatgtacaagccaggcacgtgcgaatggagccaacagcagaccactttgtgctt
tatgtcactgatgggctgcatcgctcagcagagactccatttttcgtgctgatcaaccca
accaatgatgaagtcccagaattcatagcaaggaatattactgttcaagagggggagatg
aaagagctggatctctctgttatcaatgcggttgatctggatgtgcctcaagaccgtttg
gtatttggggttgtgcagaggccctggtacgggttccttattaatggagttcatggcaat
gatattctacgctataaacagttaattaaccacgaccaccacagccatgggttgcttgtt
catgacttttccatggagctactgaagaatggaatgaagctgatgtacatgcatgacaat
tccgaaaacttcactgacagctttaaaatccagctatcagatgggaaacataaagtcctc
agaaccatttcagtaaagatcattccagttaatgatgagaaacctgttctgagcaagaag
gatgatatagaggtgaatatgggtgaaactcgaataatttctagtgctgttctgtcagtg
gaagataaagatacccccagggagagaatttactacttatttgaaagacttccagaaaat
ggtcagcttcagctcaaggtaggccaaggctggataactctccaaactggaatgaagtgc
actcaggaagaactggatatgaaccttgtgagatatgtccatacaggagctatagggtcc
aagaaccaagacagcttcacgttttatctgtgggatgggtacaacagatccccagctgtg
gacttctacataaatatcaaggacatggaaaagggagacattgctgttttcataaaacct
cttagagtgccaaaangggatcggggctacattacaaccgacgtcctccttgcactggat
ggtactgacaagccagaggagctcctctatgtgataacctcccctccccagtatggacaa
atagagtatgtcagctatcctgccatccccattacaagcttcagtcaaatggatgtagca
agacagatagtctgctatgttcacaacgcgaaagcagttgttcctgaagacacattcaga
ttcatcatcagcaatggactgaggactaagcatgggacattcatgatctccttggaggca
gtcgaccaagctttgcccacgctatctaggaacacggggttaagattagtggaaggcgct
atggcactcctttctcctgatgtcctgcagctttcagacccagacactgccaaagaaaac
cttaccttcctcttggctcagctcccccaatatggtgatctctattatcaaggggctgtg
ctactgcagtacaatttcacccagcaagatgtggacaacagggatgttgcatacaagcac
ggaggtggggattcccagattgacagatttacatttgttgcaacagataggactaatcaa
ggcttcatcgtgaatgggagggtgcagagcgagccagtggcattcaccattcaggtggat
catttggacaaaatggcaccaaaaattattcatctccattgcttttctgatgtggaactg
ctgaagaatggcaattatgggatctatattactgccaagtccctgaaggcatctgacccc
aatacagaagatgacaaaataatttttaagattttacaaggtcctcattatggctacctg
gaaaatataacaacaggtggatttattcaggaaaagtttagccaaaaggatttaaacagc
aaaatcatactttatgtcatcaatccatcacgggaagtgaattcagacaacttggagttc
caagtcacagatgccagtggtaactctgcggtgccccaaaggctggagctacggtggtct
cggattgaaatgcaacagactgaatatgaagtgtgtgagaacgtgggagtggtgtctctg
aaaatcaccagggcaggacactctgctgactctgcctttattgctgtgaaggtcaatgaa
atatctgctatgctgggaaaggactttacagtgactccctccaagcttgttcagtttgat
ccaggaatgtcaaccaagatgtggaatatagcaattacctgtgacggattagaggaagat
gatgaagtctttgaagtagttctgaactcccctgtgaatgctgttcttggcacccggaca
aaagctgtagtgaaaattttggactcaaaaggaggtcagtgcagctattcccattcttct
ggccaaaacaagcacaacttctgggggagaggcatgctgtttccagtttccccgggctcc
tcatcaccttccaggcctggcaatgctcccttggaagggatcccactgcctccttccaaa
gggatgagagagcacggaggggacgtgcggcagaaacacggcttggcgaatcgatcaagg
accagactgagagtgactggaaatggcagaatagttcacccttcatctgtatttagaaat
ggaactgatgtggttttcaaatatcacgggatggtatcactcaaaatagaggatgacacc
tcatcagctaaagcaaacaagaaggctcaagtgtcagtaattaaccgagcacaacaacag
ataaatgttgtctcctctaggaagacagaaatcccacaagctgataaggcagaactggca
tctgaaccaagctcaacacatcaggacctttactcttttccaaaggcctgtacaccagat
ttaaaggggctcttgcattatgaagaaagcactcaaaagttatttcagtgtgatgggata
atatggaaattctggaattcccaaagcaaggaggtaagcatgaagaaatgtccctctgga
tggagtcatcatgagggcagctgctacttcctggtagtgaatcacaaggtcacctggaac
actgctgctcaggcttgcagagaacaatacctggggaatctagcaagcgtggttaatgaa
caacacatgcagtggctgtgggacttcagtgggaggaagcccttttggataggcttgaat
gaccaagtcaatcctggacgttgggagtggaatggaggagaacctgtaacctacataaac
tggagaagaggctcctaccactttccaaagagaggaagaaattgtgtattggtgcagaag
cgaggaaaatggcaagcaactgactgcaggaaggtcaaacggaacagctacatatgttca
agaaagctgtaa
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