Gymnogyps californianus (California condor): 127027294
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Entry
127027294 CDS
T08687
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127027294
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127027294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
MOM1
HEAT_GCN1_fung
Motif
Other DBs
NCBI-GeneID:
127027294
NCBI-ProteinID:
XP_050768878
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All DBs
Position
Z:complement(47145819..47274232)
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AA seq
1804 aa
AA seq
DB search
MLDDIKKRFEFPNAVIQSQAVGHLIAAVLKENVSSEKIRQASDQTPALNLLWEKCCSENV
ALRTACSEGLVALVAEKHAELDYVLHGALNLIPSARNVHGLVKTIWKLLQIQAVQLGKDG
DEAVQNLYGIRNTPHPLISVLENRPDCWPVLLQQITLYFHQCPERAQSSCVGIMAPFLRY
LYCEPSQLREYAELRMGLLKILLQPHGPKHKEAPSVLECQILQLLCDLIPHLQLKDLLQV
TEALFFLQELFLSLLRYPVFWKVQLSQFCLQLLCFCEVCLNVTGECSSLISLIEDNFELL
KEVFPVEQCIIGLALLLLQTPGSQQKSVLSLAYKLLSCSEAQNISTTALTLVMPVLQILS
STTVGDCLSEDDSGTTRQQLAVNLLGILQKECVKDKKELVSCKLPFPITSSYSSLYTTWK
IIELMKEKSAVTNWLSSVKSLLPVTTQVPAHIFLLLAYLMIQENGDSLRDVLQATTEIAK
ADCSQVPNLIPVLIFKLGRPLEPALYRDILYTLPTLGVHKVCVAQILRAIHMLGSTPKLR
AITLRLMTSLWERQDRIYPELQKFLAMSDMPSLSVDKDAQWEKLIAEAACIRDICKQRPY
QHGADMLAAISQVLNECTKPDQASPAAIALQGLQALCEAEVVCICSTWNALSPKLSCDTR
PLILKALNELFALVPSLTVNTNEYEKFKAQVLSFLWNNTQNKDAVVAISAYKSLSSFGSE
EHTILHLPEQARPEVDSLEEADMNEDEEEEKEADLFVPGSSYIKLLSLTPASVLGAFEEF
AASLVKQEMTNMPRGVYHSALRGGTTRSDQGKTMAGVPNFLLKMYERNKQPGMTPGLAAG
MLLCYDLPVHMGKDGKPINRFLAGRGRNFQQMLVALIHEVNIQPSEWHRSILLPQSWLGF
MSRTYSAVLQGRQAELEMQLKHGKEDPEEVQYKQFTAWLWVRDMLTDVIKGASKDSPVVK
GNSIFALTGLAVAVAKYESSLSSDTEGMPETEPDFLPTKHWISMVTETLFSIVNSRYRPK
GQVFAWFYQKSYSGENTASIIARSCAATALSLLVPVFISSCKEKVEEVLNMLTDRLPGKP
NADESQAVQIHVGLGLGMFISRLYEEKVSDVPGQQMNLVLMKSLDALEDCCFDTSLEYNT
GCILGVGLVLSLMSHSSQTESRVHVSASLRKLCKYLDSSEDQSRWVQEVLAYSVACSCVS
AFSVGIIEAAEAEEAMNKLRTLVENNQQTYGFALALGAIVHGLSACGHGKAEDLSNRLMP
AWIKIVLAEGSPTMQRLAAVNGLVALVGSEGGMIQLKSESIQSSQFQSKLNEVIRTLTQI
ISFSGQIGLQTNAAGLLGRLHMSCLCSTQNRASVPPDFSYLPENSFIRAAIDFAIDSGKK
GPESVPTELVKVALAPIALVGESHQYPPVNWASILSPLMRLNFGGEVKHLCLQLAVTQAQ
SSQNAAMLLGMWVAPPLVYSLSMKTQKYLFMSLPLWMKHVTEDKLQSFTEVFLIQQFEVK
NRTKNPEICQCILQGLIQAMKLPNPAQYCWSFLCQAVEKIFELLPNEVQRGELEMYIDVA
KCISEMADSEIDRIVQISKNNIEKATFTKVYLISQGRLPLMNLSAVIDTVAGYHQKENIL
WMLLHSFYHARIVSHENTGVLKRMDWLLDLMGYIRNLAYKSTPLHSVNLKECIDFLLWLF
AASVVAWADHGAPLLLGLSADWSPWKHQTILPELSEDHIGKHPTDKLAVQETLTLLPSSI
SLLLAKEPWKEQTQKFIDWLINMMEGPQEALSKSSMELLKVTLLALRSLAEFKKKAVWTK
AYGW
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgttggacgacatcaagaagcggtttgaatttcctaatgcagttattcagtcacaggca
gtgggtcatctgattgctgcagtactgaaagaaaatgtttcttcagagaagatcagacag
gcgtctgaccagactcctgctctgaacttgctttgggagaagtgctgcagtgagaatgtt
gccttgcgaacagcctgctctgaggggttagtggcacttgttgcagagaaacatgctgag
cttgactatgttcttcatggagctctcaacctaattccctcagcaaggaatgtgcatggt
ttagtaaaaactatttggaaattactacagattcaagctgttcaactgggaaaagatgga
gatgaggctgttcagaatctctatggaatcaggaacactcctcatccattaatcagtgtc
cttgagaacagacctgattgctggccagttctactgcagcagataacactatatttccat
cagtgtccagagagggcacagagttcatgtgttggcataatggctccatttctaagatac
ctgtattgcgaaccatctcagttacgggaatatgctgaactgcgaatgggtttactgaag
atcttacttcagcctcatggtccaaagcacaaagaagcaccctccgtgctggaatgccag
attcttcaacttctgtgtgatttgattccacaccttcagcttaaagacttattgcaagtt
acagaagccttgttttttctgcaagagctattcctcagcctactgcgctatcctgtgttt
tggaaagttcagttatcccagttttgtctgcaactgttatgcttctgcgaagtgtgttta
aatgtaacgggagaatgctcatctttgatctccttaatagaggacaactttgagctctta
aaagaggtatttccagtggaacagtgtataattgggctagcgcttctactgctgcaaaca
ccaggaagtcagcaaaagtctgtcttgagtctagcctacaagctcctttcttgttcagaa
gcccagaacatctcaaccacagcccttactttggtgatgcctgtgctacagatcttatct
tctacaactgttggggactgcctgtcagaggatgattctggaactaccaggcagcagctg
gctgtaaatcttttgggaatattacagaaggaatgtgtgaaggataaaaaggaattggtg
tcctgcaaactccctttccccataaccagctcttacagctcattgtatacaacgtggaag
atcatagagctcatgaaagagaagtctgcggttactaactggttatcttcagtgaaatca
ctgctacctgttacaactcaagtccctgcccatatttttcttctgctggcttatctaatg
atccaagaaaatggagacagtcttcgtgatgtactccaggctactacggaaatagccaag
gctgattgttctcaggtcccaaatctgatcccagttctgatatttaaattgggaagacct
ttggagcctgcactttacagggatatattgtatacattgcctacactgggtgtgcacaag
gtttgtgtagctcagattctacgtgccatacacatgctggggagcacgccaaagcttaga
gcaattactttgcggctgatgacatccttatgggaaagacaggatcgaatttacccagaa
ttgcagaagttcttggcaatgtctgatatgccctctttgtctgttgacaaagatgctcaa
tgggaaaagctgattgctgaagctgcttgtataagagatatatgtaagcagaggccttac
cagcacggagcagacatgttggctgcaatttcgcaggtattaaacgaatgcacaaaacct
gatcaagcttcacccgctgccatagcgttacagggtcttcaggcgctttgtgaggctgag
gttgtttgcatctgttctacatggaatgctttgtcaccaaagctgagttgtgatacaaga
cccctcattttaaaagcgctgaatgaattgtttgccctggttccctcgttaacagtgaat
acaaatgagtatgagaaattcaaagctcaagttctcagcttcctttggaacaacacacaa
aacaaggatgctgttgtagccatttcggcctataaatcactctcatcgtttggctcagaa
gaacatacaattcttcatcttcctgaacaggcacgaccagaagttgactcactggaggag
gcagacatgaatgaagatgaagaagaggagaaggaggcagatctttttgttccaggttct
tcatatatcaagctgttgtctctaacgccagcttctgttttaggagcatttgaagagttt
gcagcatcacttgtgaaacaggagatgacaaacatgccccgtggtgtgtatcattctgcc
ttgagaggagggaccacacgctcagaccaggggaagaccatggcaggtgttccaaacttc
ttgctgaaaatgtatgagaggaacaaacaaccgggcatgacaccaggccttgcagctggc
atgttgttgtgttacgaccttccagttcatatgggcaaagatggcaagcctattaatcga
tttctggccggcaggggacggaatttccagcaaatgttggtagccctcattcatgaggtt
aacattcaaccttctgaatggcaccgctccatactgctgccacagtcctggttgggattt
atgagtcgaacctacagtgcagtcctgcaggggaggcaggcagagctggagatgcagtta
aaacatggaaaagaggatcctgaagaggtgcagtacaaacaatttacagcctggctgtgg
gtcagagatatgttgactgatgttatcaaaggtgcttccaaagacagcccagtggtgaaa
ggaaactctatttttgccttgactggtcttgcagttgctgtagccaaatacgaaagcagc
ctttcgtcagacactgaagggatgcctgagactgaacctgattttcttcccacaaaacac
tggatttctatggtcacagagaccctctttagtattgtgaatagccgctatcgccctaaa
ggtcaagtcttcgcatggttctaccagaaatcctattcaggtgaaaatactgctagtatt
atagctcgttcctgtgcagccactgctttgtctctcctggtgccagttttcatttcatca
tgcaaggagaaggttgaggaggtcctgaatatgctgactgacaggttacctgggaaacca
aatgctgatgagtctcaagctgttcaaatccacgtgggccttggtttggggatgtttatc
tcacgtttgtatgaagaaaaagtcagtgatgtgcctggtcaacagatgaatttagttcta
atgaagtccctggatgcgctggaagactgctgctttgacaccagtctggagtacaacacg
ggatgtattttgggagtaggacttgttctttcacttatgagtcacagtagccaaacagaa
tcacgagtacatgtttctgcttcgttgcgaaaactctgcaaatacctggacagcagtgag
gaccaaagcagatgggtccaggaggtacttgcctattctgtggcctgttcctgtgtctct
gctttcagtgttggaatcatagaagcagctgaggctgaggaggccatgaacaagctacgg
accttagtggaaaataatcagcagacctatggttttgctttagctctaggtgcaatagta
catggattgtcagcttgtggtcatgggaaagccgaagacctgagtaacagactaatgcca
gcctggataaaaattgtgcttgcagagggttctccaacaatgcagcgtctggctgctgtc
aatgggctggttgcactggtgggctctgaaggaggcatgatacagctgaaatctgagagc
attcagtcctcccagtttcaaagtaagctgaatgaagtcatcagaacccttacacagata
atcagtttttcgggacagattggccttcagacaaatgcagcaggacttttgggacgcctt
catatgtcctgtttgtgttctacccagaacagggcatccgttcctccagattttagctac
ttgcctgaaaacagctttatcagggcagccattgactttgccattgacagtggaaagaaa
ggccctgaatctgtgccaactgagctggtgaaggtagcactggcacccattgcattagtt
ggagaaagccatcagtatccacctgtaaactgggcatccattctttctcctttgatgagg
ctaaacttcggtggtgaggtaaaacatctctgccttcaactggctgtgacacaggcccaa
tcatctcaaaatgcagcaatgcttttggggatgtgggtggcacctccccttgtctacagt
ctcagtatgaaaacccagaaataccttttcatgtccttgcccctgtggatgaagcatgtt
acagaagacaaactacagtcttttacagaagtgtttctgatacaacaatttgaagtgaag
aaccgcaccaaaaacccagaaatttgccagtgtattttacaggggctcatacaggcaatg
aaacttccaaaccctgcccagtactgctggagctttctgtgccaggctgtggagaaaata
tttgagcttctaccaaacgaggttcagagaggcgaactggagatgtatatcgatgtagca
aaatgtatctcagaaatggccgattcagagattgatcgcattgtccagatctctaagaac
aatatagagaaggccacattcacgaaagtgtatttaatttctcaaggcagactgcctctg
atgaacttgagtgccgtgattgatactgtggcaggatatcaccagaaagaaaatatttta
tggatgctcttgcatagtttctatcatgctcgtattgtgagccatgaaaacacaggagtg
ctgaaaagaatggactggctgctagacttgatgggctacatcagaaatttggcatacaag
tcaacacccttacacagtgtcaatcttaaagagtgcatagatttcctcctgtggctgttt
gcagcttctgtggtggcctgggctgaccatggtgcaccattactgcttggcctcagtgct
gactggtcaccatggaagcaccaaacgatattaccggaattatctgaggatcacattggc
aagcaccccactgacaagcttgctgtgcaagagacactcactctccttccaagcagcatt
tcccttttgctggctaaagagccttggaaggaacaaacacagaagtttattgactggctg
atcaatatgatggagggtcctcaggaagcattatcaaaatcatcaatggagctgctgaaa
gtgacgcttctggccttgagatctcttgcagagttcaagaagaaagcagtgtggactaaa
gcttatgggtggtag
DBGET
integrated database retrieval system
