Gymnogyps californianus (California condor): 127027313
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Entry
127027313 CDS
T08687
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127027313
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gcl01009
]
127027313
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gcl04515
]
127027313
Protein phosphatases and associated proteins [BR:
gcl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127027313
Cell adhesion molecules [BR:
gcl04515
]
Cadherins
Protocadherins
127027313
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
ORF45
Motif
Other DBs
NCBI-GeneID:
127027313
NCBI-ProteinID:
XP_050768911
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All DBs
Position
1:complement(38320702..38324666)
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AA seq
917 aa
AA seq
DB search
MGPPGSRGSTTAGGSLQHLLLFLLFVGPFNCFASYSRATELFYSLNEGLPAGVLIGSLAR
DLRLPTASGQHPAAPQPPLSFTLASRGLGGQYVQLDNRSGELHTSAVEIDREALCVESSG
ATILGGAAAVSSSSSSPSSESCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPRFPVPHI
RLSVPENAPVNTRLAIEHPALDPDMGTNGVQTYRLRDNYGVFTLDVEENESGERTPYLIV
MGALDRETREEYVTVIVAEDGGTPPLVGSATLTIGISDINDNCPQFSDSQLNITLYGNSS
LGTHVATVHAVDVDLGSNAQITYSYSQKVPQPSRDLFHLDESTGAITLSSKVDGDTPGLH
RLIILGNGPGCIPAVITVLVTIIKVMMRPPEVVPRFIANEAEGVVYLKELEPINTPIAFF
TIKDPDEKYKVNCYLDGDGPFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEG
FRVNKIIKVQVLDDNDNSPVFSQQLIELSIEENNVPNAFLTKLYATDADSGERGQVSYFL
GPDAPSYFALDKTTGVLTVSTQLDREEKEKYRYTVKAVDSGFPPRESIATVTITVLDKND
NSPRFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVL
RAKVSLDREQQSSYVLWIEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLV
LPSTLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQND
YGLYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDISIEEKQPQISI
EPTHKKMESASCMPTLVALSIISLGSIALVTGMGIYICLRKGKKHHRADENLEVQIPLNG
RINLHMLEKKPMEISNI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggggcccccgggcagtcggggcagcaccaccgccggcggcagcctgcagcacttgctc
ctcttcctgctcttcgttggacctttcaactgctttgccagttacagccgcgccaccgag
ctcttctacagcctcaacgaggggttgcctgctggggtgctcattggcagcctggcccgt
gacctgcggctgccgacggctagtggacagcaccctgcagccccccagcccccactctcc
ttcactctggcctcccgtggcttggggggacagtatgtgcagctggacaaccgctctggg
gagctgcacacctcggccgtggagatcgaccgggaagctctgtgtgtggagagcagtggg
gccaccatccttgggggagcagctgctgtctcctcttcctcttcctcaccctcatctgag
tcatgcctgctgctgctggatgtgctggtgctaccacaggagtacttccgcctggtgaag
gtaaaaattgctatccgggatgtcaacgacaatgcgccccgcttccctgtgccccacatc
cgcctctcggttcctgagaacgcacctgtgaacacccgcctggctatcgagcaccccgcc
ctggaccccgacatgggtaccaatggtgtccagacctaccgcttgcgagataactatggt
gtcttcaccctggatgtggaggagaatgaaagcggggagaggactccatacctgattgtt
atgggggctctggacagggagacacgggaggagtatgtcacagttatcgtggctgaggat
gggggaactcctccgctcgtgggcagtgccaccctcactattggcatcagcgacatcaat
gacaactgcccacagttcagcgactcgcagctcaacatcaccctttatgggaattccagc
ctagggacacacgtggccactgtccacgcggtagacgtggaccttggatccaatgcccag
atcacctactcctacagccagaaggtcccccagccatccagagacttatttcatctggat
gaaagcacaggagccatcacgctctccagtaaagttgatggggacactccagggctccac
aggctgatcatactgggcaacggtcctggttgtattcctgctgtgatcacagtgctagtg
accatcatcaaagtcatgatgaggccccctgaagttgtccctcgtttcatagccaatgaa
gcggaaggggtggtgtacttgaaggaactggagcctatcaacacaccgatagcatttttt
accatcaaagaccctgatgaaaaatacaaagtcaattgctacttggatggtgatgggcct
ttccggctttcaccatacaagccatacaacaatgaatacctgttagagaccacaaagcct
ttggactatgagacacagcagctgtatgaaatctctgtagttgcatggaactcagaagga
tttcgtgttaacaaaataatcaaagtacaggttctggatgacaacgacaactcaccagtt
ttctctcaacagctgatagaattatccattgaggaaaacaatgttcccaatgctttcttg
accaaactgtatgctactgatgctgacagcggagaaagagggcaagtgtcctatttctta
ggtcctgatgccccttcctattttgctttagataaaaccacaggagttcttacagtttcc
acccagctggacagagaagaaaaagagaaatacagatatactgtcaaagcagtagattct
gggttccctccaagagaatcaatagcaactgtcaccattactgtattggataaaaatgat
aatagtccaagatttatcaataaggatttcagcttttttgtgccagaaaacttcccaggt
tttggtgaaattggagttataagtgtcacagatgctgatgcagggcaaaatggatgggtt
gccctttcagttctgaatggaagtgatatttttgtcatagatactggaaaaggagttttg
agagctaaagtctccctggacagggaacagcaaagctcttacgttctgtggattgaagca
gttgatggcggtgatcctgccctgtcttctacagcaaaaataactatccttcttctggac
ataaatgacaacccccctttggtcttgtttcctcaatctaatatgtcttatttgttggtc
cttccttctacccttcctggctctcccatcactgaggtttatgctgtcgataaggacact
ggcatgaatgcagtcatagcgtacagcatcataggaagaagaggccctcgaccggagtca
tttaggattgaccctaaaactggtaatatcaccttagaagagtcactgatgcaaaatgac
tatggcctttatcggctgcttgtaaaagttagtgatcacggctatccagaacctctccat
tccactgtcatggtgaaccttttcgttaatgacactgttagcaatgagagctacattgaa
agtttgttaagaaaggagcctgatatcagtatagaagaaaagcagccgcaaatatccata
gagcctacacataaaaaaatggagtcagcatcctgcatgcctaccttggtagctctgtca
ataataagcttgggttcaatcgctttagtaacagggatgggcatttacatctgtctaaga
aaagggaaaaagcatcacagagcagatgaaaacttggaagtacaaatcccattaaatgga
agaattaacctgcacatgttggagaagaaaccaatggagatttctaacatttga
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