Gymnogyps californianus (California condor): 127027722
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Entry
127027722 CDS
T08687
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127027722
03036 Chromosome and associated proteins [BR:
gcl03036
]
127027722
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127027722
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127027722
SLIK complex
127027722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
127027722
NCBI-ProteinID:
XP_050769505
LinkDB
All DBs
Position
Z:27924167..27980171
Genome browser
AA seq
1811 aa
AA seq
DB search
MNGHSDEESVRNSSGESSRLDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGT
QSESESDTSRETKQIQAKSPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQKTASSDSGSE
EDSTSSEDSADDSSNETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDREKSSCEESESDY
EPKNKVKSRKPPSRIKPKSGKKNAGLKKRQLDSSEDEEEEEEDDDDYDKRGSRRQATVNI
SYKEAEETKTDSDDLLEVCGEDVPQTEEDEFETIEKFMDSRVGRKGATGAATTIYAVEAD
GDPNAGFEKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETK
RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE
CSWEDGALIAKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLE
LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS
TLTSWQREIQTWAAQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK
SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI
MPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA
LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEAL
QHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG
ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR
IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPF
NKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFK
VANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQI
SFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKK
FGGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGP
TFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSN
LLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARK
EAQRLAGAGNSKRRKTRAKKNKVIKAAKIKEEIKSDSSPQPSEKSDEDDDEDNKDEIVSV
KYPHKKVKAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKDI
KEKRENKVKESTQKEKEVKEEKVNEIKPENKEKTKKIPLLDTPVHITATSEPVPISEESE
ELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTN
PEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNP
DVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDH
RDWDHYKQDSRYYSDSKHRKLDDYRSRDHRSNLEGSLKDSRAHSDHRSLSDHRIHSDHRS
TSEYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKS
TPEHTWSSRKT
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagcgtaagaaacagtagtggagagtcaagccgatta
gatgatgattccgggtcagcatcaggttctggatctggttcaagctctggaagcagtagt
gacggaagcagcagccagtcaggcagcagtgactctgactctggttcagagtcaggcact
cagtcagaatcagagtctgacacatctagagagacgaaacaaattcaagctaaatcgcca
aaagttgacggatctgagttttggaagtctagtccaagtatacttgctgtgcaaagatca
gcagtgctcaagaagcaacagcaacaacaaaagacagcctcatcagacagtggttcagaa
gaggactcaacaagtagtgaagattctgcagatgactcatccaatgaaaccaagaagaaa
aaacataaagatgaagactggcaaatgtcgggttcagggtccgtatcgggaactggttcc
gattctgaatcagaggaagatagggagaaaagcagttgtgaagagagtgaatctgactat
gagccaaaaaacaaggtcaaaagccggaaacctccaagcagaattaagccaaaaagtggg
aaaaagaatgcaggactgaaaaagaggcaacttgattcatcagaggacgaagaggaggaa
gaggaggatgatgatgattatgataagagaggatctcgtcgccaggcaacagtcaatatt
agttacaaagaagctgaagaaaccaagacagattctgatgatttgctggaagtttgtgga
gaagatgtcccacaaactgaagaagatgaatttgaaactatagagaagttcatggatagt
cgagttggccgaaaaggagccacaggtgctgcaaccaccatctatgcagttgaggcagat
ggtgacccaaacgctgggtttgaaaagtcaaaggagccaggagaaatacagtatcttatt
aaatggaaaggttggtcacacatccataacacttgggaaactgaggaaacactgaagcaa
caaaacgttaaaggaatgaagaaactggacaactataagaaaaaggatcaggaaacaaaa
cgatggctgaaaaatgcttctccggaagatgtggaatattacaactgccagcaggagctt
acagatgatctacataaacaatatcagatagtagaaagaataattgctcattcaaaccag
aagtcagcggctggttatccagactactattgtaaatggcagggtctgccttattcagaa
tgtagctgggaagatggtgctctcattgccaaaaagtttcaggcatgcattgatgagtac
ttcagcagaaatcaatccaagactactccctttaaggattgcaaggttctaaaacagagg
ccaaggtttgttgcactgaagaagcaaccatcttacattggaggacatgaaagtttagag
ttaagagattatcagttaaatgggttgaattggcttgctcactcatggtgcaaagggaat
agctgtattcttgcagatgaaatgggtctgggtaaaacaatacaaacaatttcttttttg
aactacctgtttcacgaacaccaattgtatggtcctttcttgttggtcgtgccactttct
accttgacatcttggcaaagagagattcaaacttgggctgctcagatgaatgctgtagtt
tacttaggagatataactagcagaaatatgataagaactcatgaatggatgcatccacag
accaaacgcttaaaatttaacatacttctaacaacctatgaaattttgctgaaggataag
tcattccttggtggtctgaattgggcattcataggagttgatgaagctcatcgtttaaaa
aatgacgactctcttctgtacaagactttaatagactttaagtctaaccatcgtcttctt
attactggaacccctttgcaaaactccctcaaagaactttggtctttgttgcacttcatc
atgccagaaaagttttcctcttgggaagattttgaagaggagcatggcaaagggagagag
tatggttatgcaagtcttcacaaagaacttgaaccatttctgctgagaagagttaaaaaa
gatgtagaaaagtctttacctgctaaagttgagcaaattctgaggatggaaatgagtgca
ttgcagaagcaatattacaagtggattttaaccaggaattataaagccctcagtaaaggt
tcaaaaggcagtacatcaggctttttgaacatcatgatggaactcaagaagtgttgtaac
cattgctacctcattaaaccaccagatgataatgaattctataataaacaggaggcctta
cagcatttaatacgtagcagtgggaaactaatccttcttgacaagctactgatccgtctg
cgagagcgtggcaacagagttctgattttctcacagatggtgaggatgctggacatccta
gcagagtatctgaagtatcgtcagtttccctttcagagacttgatggatcaataaaaggg
gaattgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgcttt
ttactgtctaccagagctggaggattaggtatcaacttggcatctgctgacactgtagtt
atatttgattctgactggaatccacagaatgatctgcaagcacaggctagagcgcacagg
attggacagaagaaacaggttaatatttatcggctagtcacaaaaggatcagtagaagaa
gatattcttgaaagagccaagaagaagatggtgttagatcatttagtaattcagagaatg
gacactacagggaaaaccgtactacatacaggctctactccttcaagctcaacacctttt
aataaggaggagttatcagctattttgaagtttggtgctgaggaactttttaaagaacct
gaaggggaagaacaggagccccaggaaatggatatagacgaaatcttgaagagggctgaa
actcgggaaaatgagccaggtccattaactgtaggagacgagttgctttcacagttcaag
gtggccaacttttccaatatggatgaagatgatattgagttggaaccagaaagaaattca
agaaattgggaagaaatcattccggaagtccagcggcgaagaatagaagaggaggagaga
caaaaagaacttgaagaaatatacatgctcccaaggatgagaaattgtgcaaaacagatc
agctttaatggaagtgaagggaggcgcagtaggagcagaagatactctggatctgatagt
gactccatctcagaaagaaaacggccgaaaaaacgtggaagaccacgaactattcctcga
gaaaatattaaaggatttagtgatgcagagatcaggcggtttatcaagagttacaagaaa
tttggtggccctcttgaaaggttagatgctgtagctagagatgctgagctagtcgataaa
tcggagacagatcttagacgtttgggagagcttgtacataatggatgcattaaagcttta
aaggacaattcatctggacaagaaagagcaggaggtagacttgggaaagttaaaggccca
acattccgaatttcaggagtgcaggtgaatgcaaagctagtcatctctcatgaagaagag
ttggcacctttgcacaaatccattccttcagatccagaagaaagaaaaaggtatgtcatc
ccatgccacaccaaggctgctcattttgatatagattggggtaaggaagatgattccaat
ctgttaattggcatctatgaatatggttatggcagctgggaaatgataaaaatggatcct
gatctcagtttgacacagaagattttgcctgatgatccagataagaaaccccaggcgaag
cagttacagacccgtgcagactacctcattaaattactgaataaagaccttgcaaggaag
gaagcacaaagacttgctggtgcaggcaattcaaagaggaggaaaacaagagctaagaag
aataaggtgataaaggctgcaaaaataaaagaagaaataaaaagtgattcttcaccacaa
ccctcggaaaaatctgatgaagatgatgatgaggataacaaggatgagattgtttcagtg
aaatatccgcataaaaaagttaaagcagaaaaagaaaatgaagaaaagcctgagccagat
attggtataaagaaggaagctgaagaaaaaagagagacaaaagaaaaggaaaataagaga
gatttgaaaagggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagatatt
aaagaaaagagagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaaggaa
gagaaggtaaatgaaatcaaacctgaaaataaagaaaaaactaaaaaaattccattgttg
gatactccagttcatattactgcaactagtgaaccagttcctatatcggaagaatctgaa
gaactggatcagaaaacttttagtgtgtgcaaagaaagaatgaggcctgtcaaagcagca
ttgaaacagctggatcgaccagagaagggcctttctgaaagagagcagctagaacatact
agacagtgtctaatcaaaattggggatcacattactgaatgtctaaaggagtacacaaat
cctgaacaaattaaacagtggagaaaaaatttgtggatttttgtctctaagtttacagaa
tttgatgccagaaagctgcacaaactgtataaacatgcaatcaaaaaacgccaagagtct
cagcaacacaatgaccagaatattagcagcaatgtgaatacacatgtaattagaaatcca
gatgtggaaagactgaaggagaatacaaaccatgatgacagtagcagggacagttattct
tctgatagacatttgtcacaataccacgatcatcataaagacaggcatcagggagatgct
tacaagaaaagtgactctaggaaaaggccctattcagccttcagcaatggaaaagatcac
agagactgggatcactacaaacaagacagcagatactacagtgatagtaaacatagaaag
ttagatgactacaggagcagagaccacaggtcaaacctggaaggaagtttaaaagacagc
cgggctcattcagatcaccgttccctttcagaccacaggatacattcagatcaccgttct
acttcagagtacagccatcataaatcttctagagattataggtaccactcagactggcaa
atggaccacagagcttcgggtagtggcccaaggtcaccattagatcagaggtctccttat
ggttcaagatctcccctaggacacagatctccatttgaacactcatcagatcacaaaagt
acacctgaacatacatggagtagccggaaaacataa
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