Gymnogyps californianus (California condor): 127029353
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Entry
127029353 CDS
T08687
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03013
Nucleocytoplasmic transport
gcl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127029353
03015 mRNA surveillance pathway
127029353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127029353
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127029353
mRNA cycle factors
P-body specific factors
127029353
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
127029353
NCBI-ProteinID:
XP_050770892
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Position
1:212087864..212152662
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AA seq
1292 aa
AA seq
DB search
MPAERKKPANMEEKESPLNNKEKEFSERRPVSTREKPKEDVKVGMKRETLKVPEDKKKKL
EEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKKKQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQSKDSSKDESRDSKDVKDNKEAPGSEDLELELENLDINDDPLELDCGDEAE
DLTKKLLDEQGKREGADSTGAENSDGKHAERKQEDEEASTGSHLKLIVDAFLQQLPNCVN
RDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDL
CSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHI
EMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPA
EKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVK
YNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYN
YRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKR
KLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQV
QDLEREFLIKLGIVNDKDSKDSITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEG
SDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKM
MLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNK
QQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPA
PANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagccagcaaatatggaagaaaaagaatctccgttaaataat
aaagaaaaagaatttagtgaaaggcgaccagtgagcaccagggagaagccaaaagaagat
gtcaaggttggcatgaagagagagactttaaaggttcctgaagataaaaagaaaaaactg
gaagaggataaaagaaaaaaggaagacaaggagcgaaagaaaaaagaagaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaagag
gagaaaaagaaacaagaggaggaagagaaaaagaaacaagaagaagcagctgctcaactg
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggagcgccatcaggcaaga
aaagagcttcgcagcaaaaatcagaatgcaccagacaatcgccctgaggaaaacttcttc
agcagactggattccagtctgaagaagaacacagcttttgttaagaagctaaaaaccatt
acagagcaacaaagggactccttgtcccatgactttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagccaaactgaagatatcagatgtgaactgc
gctgtgcacttgtgttccctctttcaccagcgctatgctgattttgctccttcattactt
caggcttggaaaaaacattttgaagcgaggaaagaagagaagactcccaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggaaagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcattcttcactccaaaggagagctgagtgaagatcgacacaagcaatatgaggaa
tttgcaatgtcgtatcagaagctgttggcaaattctcaatctctagctgatcttttggat
gaaaatatgcctgacctcccgcaagagaaaccaacacctgaggaacatggacctggtatt
gatattttcacaccaggaaagcctggagaatatgacctggaggggggtatctgggaagat
gaagatgctagaaacttctatgagaatctcatcgacttaaaggcttttgtgccagcaatt
ttgtttaaagataatgaaaaatgttcccagagcaaggattccagcaaagatgaatcaaga
gattcaaaagatgtcaaagataataaggaagcacctgggagtgaggatttggagttggag
ctggagaacctggatattaatgatgatcccctggagttagactgtggagatgaggcagaa
gatcttacaaaaaagcttcttgatgagcaagggaagagagagggagcagatagcaccgga
gctgaaaatagtgacggaaaacatgctgaaagaaaacaagaggatgaagaagccagtaca
ggatctcatttaaaacttatagtagatgcttttcttcagcagcttccaaactgtgtcaac
agagacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaac
agaagaaaactagtacgagcacttttcatcgttcctagacaaaggttggatttgctaccg
ttttatgcaagactggttgccacactgcatccctgtatgtctgacgtagccgaagatctt
tgttccatgctgaaaggggacttcagatttcatgtaagaaaaaaggaccagatcaacatt
gaaacaaagaataaaactgtgagatttattggtgagcttaccaagtttaagatgttttcc
aaaaacgatactctccactgtttaaagatgcttctgtcagacttttctcatcaccatatt
gaaatggcatgtactctgctggaaacctgtggaagattcctcttcagatcaccagaatct
cacttaagaaccagtgttcttttggaacaaatgatgagaaaaaaacaagcaatgcatctt
gatgcgcgttatgttacaatggtagaaaatgcctattactactgtaatccccctccagct
gaaaaaactgtgaagaaaaaacgtcctcctttgcaggaatatattcgtaagcttctttac
aaggatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttgg
caggatgcagaagtaaaagactatgttatatgctgtatgatcaacatctggaatgtgaaa
tataatagtattcactgtgtagccaacctcttagcagggttggtcctttaccaggaagat
gttggaattcatgttgtggatggagtgttagaggatattcgactaggaatggaggttaac
cagccaaagtttaaccaacggcggatcagcagtgccaagtttttgggggagctttacaat
tatcgaatggtggaatcggctgtaatatttcgaactctgtactctttcacatcatttggt
gtgaaccctgatggtagtcctagtccactggaccctccagagcatcttttcagaatcaga
ctagtttgtactatccttgatacctgtgggcagtattttgacagaggatccagcaaacga
aaacttgattgcttccttgtatattttcagcggtatgtttggtggaaaaaaagtctggat
gtttggacaaaagaccacccgtttcctatagacatagactacatgatcagtgatacactg
gaactgctgagaccaaagataaagctctgtaattctctggaagaagctatcagacaggtg
caagacttggaacgagaattcttaataaaattaggaattgtgaatgacaaagattccaaa
gattccattacggaaggagagaatctggaagaggatgaagaggaggaggaaggtggagca
gagacagaggaacaatctggaaatgaaagtgaagtaaatgagccagaagaagaggagggc
tctgacaacgaggaagaagaaggtgaagaagaggaagaagaaaacacggattatcttaca
gactccaataaggaaaatgaaaccgatgaggagaatacagaagtaatgattaaaggagga
ggacttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattggataaaatg
atgctggaaaatcttcagcaacggagtggtgaatctgttaaagtacatcagttggatgtt
gctattcctctacatctcaaaagtcagctcaagaagggtcccccacttggaggtggagaa
ggagagtcagagtctggagacacaatgccatttgtcatgttaacacgaaaaggcaacaaa
cagcagtttaagatcctaaatgtaccaatgtcttcccaacttgctgccaaccattggaac
caacagcaagctgaacaggaggagagaatgaggatgaaaaagctcactttggatatcaat
gaacggcaagaacaagaggactaccaggaaatgttgcagtctctggcacagcgtccagct
ccagcaaatactaatcgtgaacggcggcctcgttaccagcatccgaagggagcacctaat
gcagatctaatctttaaaactggtgggaggagacgttga
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