Entry |
|
Name |
(RefSeq) exosome complex component RRP43
|
KO |
K12586 | exosome complex component RRP43 |
|
Organism |
gcl Gymnogyps californianus (California condor)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:gcl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127029495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:gcl03019]
127029495
Messenger RNA biogenesis [BR:gcl03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127029495
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:27003030..27015306
|
AA seq |
349 aa
MRKRAPPRPPPRGAAPPGEWRWEPPASPSGRGSPAPPPLLQPQWAPPPPGRRQRLPAGRV
TRRQHFRDGSGSAMAMAFKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSITTADG
SALVKLGNTTVICGVKAELAAPAVDSANKGYIVPNVELPSLCSMRFRSGPPGEEAQAASQ
FIADVIENSQIIAKEDLCIANGKLAWVLYCDIICLDYDGNILDASTFALLAALKNVQLPS
VTINEETGLSEVNLKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTD
DEGRLCSVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIKSIKPK |
NT seq |
1050 nt +upstreamnt +downstreamnt
atgcggaagcgagcgcctccccgcccgccaccaagaggggccgctccgcccggcgagtgg
cgctgggagccgccggcgtcccccagcggcaggggctcgccagcgccgccgcccctattg
cagccgcagtgggcaccgccgccgccaggccgccggcaaaggcttccggccggccgggtc
acaaggcggcagcacttccgggacggcagcggctccgcgatggcgatggctttcaaaacg
gtggaaccattggaatattacagaagatttttgaaagagaactgtcgacccgatggaagg
gagttaggtgaattccgggcaaccactgtcaacataggttcaattacaactgcagatggt
tctgccctggtgaagttaggaaatactacagtgatttgtggagttaaagcggaacttgct
gcacccgcagtagattctgctaataagggatatattgttccaaatgtagaactgccatcc
ctctgttcaatgaggtttcgctctggaccacctggtgaagaggctcaagcagcaagccag
ttcattgcagatgtgattgaaaattcacagataatagcgaaagaagatctatgtattgca
aacggcaagcttgcttgggtgttatactgtgatatcatatgtctggactatgatggaaac
attttggatgccagtacctttgctttgttagcagcattaaaaaatgtacaattgccatca
gttactataaatgaagaaactggtttatcagaagttaatttaaaacagaagaaccctttg
attatcagaaagcacccagttgccacatcatttgctatatttgatgacacattactcatt
gttgatccaactgctgaagaagaagacttagcaactggaacagtaactattgtaactgat
gatgaaggcagactatgttctgtccataaaccaggtggaagtcctcttacaggagccaag
cttcaggactgtatcaccagagcaattacaagacacaaagaagtaaagaagctgatagac
aaagtaataaaaagtataaagcccaagtga |