Gymnogyps californianus (California condor): 127029549
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Entry
127029549 CDS
T08687
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gcl01002
]
127029549
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127029549
Enzymes [BR:
gcl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127029549
Peptidases and inhibitors [BR:
gcl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127029549
Ubiquitin system [BR:
gcl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127029549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
127029549
NCBI-ProteinID:
XP_050771162
LinkDB
All DBs
Position
1:95006068..95112114
Genome browser
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYISELAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggagggaatgatagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttccaat
gagaactccccagctaccccgcctgatgagcagggccaaggagatgctccaccccagctt
gaagatgaggagcctgcatttccacacacagacctggcaaagttggatgacatgattaac
aggcctcgatgggttgttcctgtattgccgaaaggggaattagaagttcttctagaagct
gctatcgacctaagtaaaaaaggccttgatgtcaaaagtgaagcatgccagcgatttttt
cgagatgggttaacaatatctttcacaaaaatccttacagatgaggcagtgagcggctgg
aagtttgagattcatagatgtattattaacaacactcatcgactagtggaactctgtgtg
gccaagctgtcccaagattggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatctatacaatggtactcgtccctcagaaacagttcctgcaggagtc
cagcttgctgaagatgaactttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagatcttatcaacaagtttggcacattaaatggatttcagatcttgcatgatcgc
ttcatgagtggatcagcattgaatgttcagataattgcagctctcatcaagccatttgga
caatgttatgaatttctaacattacatacagtgaagaaatatttccttccaattatagaa
atggttccacaatttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctgtcaatgataatcaaatctctaaagaacttagcttcgaga
gttccaggacaagaagaaactgtaaaaaacttagaaatatttaggttaaaaatgatactt
agattgttacaaatttcttctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtgtcgtattatactcatcggcatggtaatcctgaagaggaagaatgg
cttacagctgaaagaatggcagaatggatccagcagaataatattttatcaattgtgtta
agagatagtcttcatcagcctcaatatgtagagaagttagagaaaattctccgttttgtc
atcaaagagaaagccctcactttgcaagatcttgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaaaaatgtacatgatctccttgcaaaattagcttgggatttc
tctcctgagcagcttgatcacctgttcgattgttttaaggcaagttggacaaatgcaagc
aagaaacagcgtgagaaactacttgagttaattcgtcgtcttgcagaggatgacaaggat
ggtgtgatggcacacaaagtgctgaaccttttgtggaatttggctcatagtgatgatgta
ccagttgatatcatggaccaggctcttagtgcccatattaaaatcttagattacagctgt
tcacaggaccgagatacacaaaagatccagtggatagatcgttttatagaagagcttcgc
acaaatgacaaatgggtcattcctgcactgaaacagatcagagaaatttgcagtttgttt
ggtgaagcaccacaaaacttgagtcagactcagcgaagtccacatgtgttttaccgacat
gatttaatcaatcaacttcagcacaatcatgccctagttacattggttgcagaaaatctc
tctgcctatatggaaagcatgaggcagtatgctaaagagcatggtgaatatgatcctcaa
actgtaagaccaggaagcagatacagtcatgtgcaggaagtacaggagcgacttaacttc
ttacgatttttattgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagctgaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagctagtagcaaagagacgagcc
tatatgatggatgatctggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacatcgcaaacagagcaatagatcttcttaaagagatctatactaatctt
ggcccaaggttacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttt
gatcgtctaaaagcctcctatgatacattatgtgtgttggatggagataaagacagtatc
aattgtgcaagacaagaagcaatacgaatggtgagagtgttgactgttttaagagagtat
ataaatgaatgtgacagtgattaccacgaagagagaactattctaccgatgtcaagagct
ttccgtggtaaacatatcacactggtagttcgttttccaaaccaaggccgacaggtggaa
gatttggatatttggtctcatacaaacgacacaattggccaagtacggcgttgtattctc
aatcgtattaaagccaatagtgcgcacacaaaagtagaactgttcattggtggtgagctg
gtggaccctgcagatgatagaaaattaattgggcagttgaatctcaaagataaaacgcta
attacggctaagcttacacagataaattctaatatgccctcaagtccagacagttcttct
gactcttcaactggttctccgggcaaccatggcaatcactacagtgatggtccaaatccc
gaagttgaaagctgcttgcctggggtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagttgcagacttgggcagtagcctaaatatgccacctcttagagatggagca
cgtgttcttatgaagctcatgccaccagataacactacggttgagaaactaagagctatt
tgtttagatcatgcaaagcttggggaaagcagccttagtccatcccttgattctctattc
tttggtccttctgcctcacaagtgctctatctaacagaggtagtttatgccttgttaatg
cctgccagtgcacctctgggagaagatgccagtgacttccaatacaacttcttaaaaagt
ggtggtttgcctcttgtattgagcatgctgactagaaataacttcctgccaaatgcagat
atggaaactcgaaggggtgcctaccttaacgctctaaaaatagccaaattattgctaaca
gcaattggatatggccatgttcgagctgtggcagaagcttgtcagccagttgttgaaggc
acaagtacaatttcaccgataaaccaggctacgcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccaacttcagaatgcatgctaagaaatgtagcaatacgt
cttgcacagcaaatatctgatgaggcttcaaaatacatccctgatatctgtgttattagg
gcagtacaaaaaattgtttgggcatcaggttgtgggtcagttcagctggttttcagctca
aatgaggaaattagtaaaatctatgaaaagacaaatgcaggaaatgaaccagacatggaa
gatgaacaagtttgctgtgaagcattggaggtgatgaccctgtgttttgctttgattcca
acggcactggatgcactcagtaaagaaaaggcatggcagacgtttatcattgatttgcta
ttgcactgtcacagcaaaactgttcgtcagatggcacaggagcaattctttttaatggct
acgaggtgttgcatgggacagagacctctcctcttcttcattaccctgctgtttactgtt
ctagggagtactgcaagagagagagctaagcattctggagactacttcactctcttaaga
catcttcttaattatgcttacaacagtaatattaatgtacccaatgctgaagttcttctc
aataatgaaattgactggcttaaaaggattagggacgaagtaaaaagaacaggggaaaca
ggtgttgaagaaactatcttagagggacaccttggagtaacaaaagagttattagcattc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaaa
gagttgatagatgatttcatctttccggcatccaatgtttatctacaatacatgagaaat
ggagaattgcctgctgagcaggccataccagtctgtagttcaccagctactattaatgct
ggctttgaactactagttgcactagcagttggatgtgtgcgaaatctcaaacagatagta
gacaccttgactgaaatgtattacataggtacagcaatcactacttgtgaagcgcttaca
gaatgggagtatctaccacctgttgggcctcgaccaccaaagggatttgtaggactgaaa
aatgctggtgccacttgttacatgaattcagtcattcagcagctgtacatgattccagcc
atcaggaatgggattcttgcaattgaaggcacaggcagtgatgtagatgatgacatgtct
ggggatgaaaagcaggacaatgagagcaatgttgacccgcgagatgatgtgtttggttat
ccacatcagtatgaagacaaaccagcactgagtaaaacagaagatagaaaagagtacaat
attggagttctgaggcatctccaagtaatttttggtcatttagcagcttccaggctacag
tactatgtaccaagagggttttggaaacaatttagactttggggtgaacctgtaaatcta
cgtgaacaacatgatgctttagaattttttaattccttggtggacagtttagatgaagct
ttaaaagctttgggccatccagcaatgttaagtaaagttttaggagggtcctttgctgat
cagaagatttgtcaaggatgcccacatcggtatgaatgcgaggaatccttcacaactctg
aatgtagatataagaaatcaccaaaaccttcttgattctttggaacagtatgtcaaagga
gatttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggttgataca
gtgaaacgcttgttgattaagaagttgcctccagttcttgcaatccagttgaaacgattt
gattatgactgggaaagggaatgtgcaatcaagttcaatgattattttgaatttccacga
gagctggacatggagccttacacggtggcaggtgtagctaaattggaaggagatgatgta
aatcctgaaaatcagataatacaaaatgaacagtctgaaaatgaacactctgggagcaca
aaatacaggcttgttggtgtacttgtacacagcggccaggccagtggtggacattattac
tcttatattatccagaggaatggtggagatggtgagaaaaatcgatggtataaatttgat
gatggagatgtgacagagtgtaaaatggatgatgatgaagaaatgaaaaatcagtgtttt
ggtggagaatacatgggagaagtatttgatcacatgatgaagcgtatgtcctacagacgc
cagaagaggtggtggaatgcttatattcttttttatgaacgtatggacacaatagacaaa
gacaatgaactaataaaatatatttcagaactcgctatcaccactaaaccccatcagatt
aaaatgccatcagccattgaacgaagtgtacggaagcagaacgtgcagttcatgcataac
cgtatgcagtacagcctagaatatttccagttcataaagaaattgcttacttgtaatagt
gtctacttaaatcctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgtggccctgctagtgattggtatgatgcattatgcatccttcttcgtcacagc
aagaatgtacgcttttggtttgcacacaacgtcctttttaatgtttcaaaccgcttctcc
gagtatcttttggaatgccctagtgcagaagtgaggggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagacggaccatgtccttcaccttttgcctctcctgga
ccttccagtcaggcttatgataacttaagtttaagtgatcacttactgagagcggtacta
aatcttctaagaagggaagtatctgaacatggccgccatttgcagcagtatttcaatctg
tttgtgatgtatgccaatctaggtgtagcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgcttgtggctctggatgaaggtccaggtcctccaattaaataccag
tatgctgaactggggaagctatacactgttgtgtcacaactgatccgttgttgcaatgtg
tcatcgcggatgcagtcttctatcaatggtaatcccccacttgccaacccttacggtgat
cctaatttatctcaacctataatggcacttcagcagaacgtagcagacattttgtttgtg
agaactagttatgtgaagaaaattattgaagattgcagcaactctgaagagaccatcaag
ttgcttcgtttctgctgttgggagaatcctcagttctcttccactgtcctcagtgaactt
ctttggcaggttgcatattcatatacgtatgagcttcgaccttacttggatctgcttctg
caaatcctattaattgaggactcttggcaaactcacaggattcacaatgcacttaaggga
atcccggatgacagggatggactatttgacaccattcagcgctctaagaatcattatcag
aaaagagcttaccagtgtataaagtgcatggtagctctcttcagcaactgtcctgtagcc
taccagatccttcagagcaatggagatttgaagagaaaatggacctgggcagtagaatgg
cttggagacgagcttgagcgtagaccatacactggcaatccccaatacacctataataat
tggtctccaccaatacaaagcaatgaaacatcaaatggctacttcctagagagatcacac
agtgctagaatgactcttgcaaaagcttgtgaactgtgcccagaggaggaaccagatgat
cctgatgccccagatgaacatgagtcttctccacctgaagatgccccactgtatccccat
tcacctggttcccagtatcaacagaataaccacgtgcatggacagccatatacaggcccg
gcagcacatcatatgaacaaccctcagcgaactggccaacgagcacaagaaaattatgaa
ggcagtgaagaagtttccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
