Gymnogyps californianus (California condor): 127029581
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Entry
127029581 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04510
Focal adhesion
gcl04512
ECM-receptor interaction
gcl04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127029581
04518 Integrin signaling
127029581
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127029581
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
Rod_CreS
DUF8003
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
127029581
NCBI-ProteinID:
XP_050771232
LinkDB
All DBs
Position
1:202858425..202900538
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AA seq
1808 aa
AA seq
DB search
MRLGLAILLHLMLIRLQHAQDDCDAGSCHPAVGDLLLGRSKQLTASSTCGMISPQKYCII
GYLEAEQKCFLCDSRYPYNPYTQHNSHMVENIITTFEPDRKKKWWQSENDIDHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKAFRYFAQDCAASFPNISSGPAKSVGD
VICDSRYSDIEPSTEGEVVLKALDPSFEIENPYVPYIQELITLTNLRINFTKLHTLGDAL
LGRRHNDPLEKYYYAVYEMVVRGSCFCNGHASQCDPVQNLRGDVFHQSGMVHGRCICHHN
TEGLSCERCKDFYNDAPWRPAEGTQDNACKRCNCNGHSGRCHFDMAVYQASGGVSGGVCE
DCQDNTTGQHCDQCKRFFYWDPLKVISDPQACLPCNCDPEGTLHNGVCESRTDPALGTVA
GRCPCKENTEGVRCDKCRANYYGLSGSDPLGCQPCNCDPSGSLPFSICDPATGECLCQRF
TTGRRCEKCIAGYWGLGNSLYGCSPCDCDIGGSQNNLCSPKDGQCKCLPNIVSRQCNEPA
PGYFFLPLDYYIYEAEHAKPLSGSAPLVKQNTLPRCDIYFQKQGYEFTIENGKIVLNRSK
KRSVRKSGLEQGAMQFGQDSAVAVVFRQPSAGRSVTWTGPGFARVPSGAGLRFAINNVPF
AMDFDVTIRYEPESLEDWLASVAVQPAGILSSQRCKNKGLSEEPHALPLPATKRIALLQT
PVCLEPGTEYSVDVYFSQPSASDPKAKSFILIDSLGLIPRIGSVENLCSEKDLDEYQKYH
CIEIASEVGPHVLPEACARLIVSMSARIHNGAVACNCNPQGSLNASCSKLGGQCQCKANV
MGRCCDTCSAGSYGFGFHGCYACECHPQGSLSTLCDQVTGQCSCRREVDGQRCSRCLAGY
FGFPLCRPCPCNGYAELCDPVTGVCLNCHGFTAGSHCEKCVDGYYGNPLSGEPCRPCMCP
GAPTSNRYFARSCYQDSRSAQLVCNCLEGYSGNRCDECPSGFYKNPGSPGLDCAPCPCNN
NIDVTDPESCNRVTGECTKCLHNTHGANCQFCKPGYFGSALSQNCRRCTCNPVGVVPAMC
PXGDAACLCDPATGACPCLPNVVGATCEQCASGYWDLASGKGCQICDCDPKNSRSNQCNQ
LTGQCPCKRGYSGRCCNECEENYFGNPQMHCISCECNEEGTSQPKCDKATGACNCRAGVT
GRFCDQCGRGFEKDFPSCRQCHLCFDQWDTEITALAQTAQGLMRFAANLEDKGGRMPSCD
MRFKAFADAISEIERILRHPVLSLEALSGIKDFQSYVQQKFAQMDPLHSTLYEFPDLNKN
IEDIGEEADLVYELLQQKIHLHQSFHYLNLKEAISNIRKDFEVSLLAEQKTSGTTPIVRY
SEYTRNHALTMLGHEAFKASNVLEQLKVIKSPNIRNLNEKICGVPGDQPCVTAACGGALC
RDSHGLRQCGGPNCGGALPLSTDAFRKAEETAVLLNNLTTQLQEPENQVENIRKMAEDSK
LKGSQFNGQLERAKNQIEVDGEITKEFIQKVKDFLLDESAPPEDIEKVANYILQINLPLT
PRELTGMLGKMRSIMKHCEKYKLNANKRNRKREEARMLLVEAQEANKAAKALPPVDGMNN
KLKNVVKSQGHSKNTLIKLNEEIQGIRAQISQAENQVNKTNDELNDLSAKQSEMEDEIAT
LQAKMLMNKNQARKARAGAEAAHKRAQNIDNEFADIKRKYTVLQEKLKAQGPPKVTLEKV
KQLKEEAEKLVEETEKKIKRITDLEKKLQDLNQTKQDKAEQLRQLEEQVIAIKNEITEQE
SKYATCKS
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggggctggctatcctattacacctcatgctgataagactccagcatgcacag
gatgactgtgatgctgggtcctgccacccggctgttggggacctcctcctgggtcgcagc
aagcaattaacagcctcgtcaacctgtggaatgatcagccctcagaagtactgcattata
ggctacctagaggctgaacagaagtgctttctctgtgattccagatacccgtataatccc
tatacgcagcacaatagtcacatggttgaaaatattatcacaacttttgagcccgatagg
aaaaagaagtggtggcagtcagaaaatgacattgaccatgtcagcattagattggaccta
gaaactttattccagttcagccatcttatcctgacttttaagacatttcggcctgcagca
atgctggttgagcgctccaccgactttggtcagacctggaaagcatttagatattttgca
caggactgtgcagcttcttttcccaacatctcttctggtccagcaaaaagtgtgggagat
gtcatttgtgattcaagatactcagacatcgagccctccactgaaggcgaggttgtttta
aaagctttggatcccagctttgaaatagaaaatccatatgtgccatatatccaagagctc
attacgttgacaaatctaaggatcaattttactaaactccacacccttggggatgctctg
cttggaagaaggcacaatgatcccctcgagaagtactactatgctgtctatgagatggtt
gtgcggggcagctgcttttgcaatggccacgccagccagtgtgatcccgtgcagaatctg
cggggagatgttttccatcagtctgggatggtccatgggagatgtatctgccaccataac
accgaaggtttatcttgtgaaagatgcaaagatttctacaatgatgctccctggaggcca
gctgaagggacacaagataatgcttgcaaacggtgtaactgcaacggccactctggcaga
tgccactttgacatggccgtgtaccaggccagtggcggggtcagcggtggtgtttgtgag
gactgtcaagacaacaccacagggcaacactgtgaccagtgcaaacgtttcttttactgg
gatccactcaaagtcatctcagaccctcaggcgtgcctcccctgcaactgtgacccagaa
ggtacgttgcacaacggcgtgtgcgagagccgcacagatcctgctctgggaacggtcgcg
ggccggtgcccttgcaaggagaacacggagggtgtccgctgtgacaagtgcagggcgaac
tactacgggctgagcggcagtgaccctctgggctgccagccctgcaactgtgatccctcc
ggcagtttgcccttctccatctgtgatcctgccacgggagagtgcctctgccagcggttc
accacggggcgacgctgtgaaaaatgcatcgcaggatactggggtcttggcaacagcttg
tatggctgttctccatgtgactgtgatattggtggatcccagaataacttgtgctcacca
aaggacggtcagtgcaaatgtcttcccaacatcgtgagccgccagtgtaacgagccagcc
ccaggctacttctttttacccctggattattatatttatgaagctgagcatgcaaaaccc
ctttctggctctgcacccttggttaaacaaaacactcttccgaggtgtgacatctacttc
cagaagcaaggctatgagttcacaattgaaaatggaaagattgtgttaaacaggagcaag
aaacgaagtgtaagaaaatctggactggaacagggtgcaatgcagtttggacaggactca
gctgtggcggtggttttcaggcagcccagtgccggtcggtctgtcacatggacgggacct
ggcttcgcccgtgttcccagtggagctgggctgagatttgccatcaacaacgttcccttt
gctatggactttgatgtcacgattcgttatgagcctgagtccttggaagactggctagca
agtgttgctgtccagcccgctggtattttgtcaagtcaacgctgcaaaaacaagggcctt
tcagaggagccacatgcgttgcctctcccagctacaaagaggattgcacttctgcaaact
cctgtctgcctagagccaggaacagaatattctgtggatgtgtatttttctcagccctct
gcctctgacccaaaggcaaaatcgttcatcttgattgactcacttggacttattcccaga
atcggctctgtggagaacttatgcagcgaaaaggatttagatgagtaccagaagtatcac
tgtattgaaattgcatcagaagttggacctcacgtcctgcccgaagcgtgcgcacggctc
atagtgagcatgtcagcccgtattcacaatggtgccgtcgcgtgtaactgcaatccccaa
gggtcgctgaacgccagctgcagtaaactagggggccagtgtcagtgcaaagccaacgtc
atgggacgctgctgtgacacctgctctgcgggcagctatggctttggcttccacggctgc
tacgcatgcgagtgccacccgcaaggctcgctgagcacgctgtgtgaccaggtgacgggg
cagtgctcctgccgccgggaggtggatggtcagcgctgcagccgatgtctggctgggtat
tttggatttcccctctgccgtccttgcccgtgtaatggctatgcagagctttgcgacccg
gtgactggagtgtgcctgaactgccacgggtttacggctggaagccactgtgaaaagtgc
gtggatggctattatggaaaccctctgagcggagaaccctgccgcccatgcatgtgccca
ggggcacctacaagcaataggtattttgcacgttcctgttaccaggactcccgctctgca
caactagtctgcaattgtctagagggatattcaggcaaccggtgtgacgagtgtcctagt
gggttctacaaaaacccaggcagccctgggcttgactgtgcgccatgtccctgcaataac
aacattgatgtgacggacccagagtcctgtaacagggtcactggggaatgcaccaagtgt
ttacacaacacccatggagcaaactgccagttctgcaaaccagggtattttggctcagct
ctcagtcaaaactgtcgaaggtgcacgtgcaatccggtgggtgttgtccctgccatgtgc
ccgngaggggacgcagcctgtctgtgtgacccagccacgggagcttgcccttgcctgccc
aacgtggtgggcgcaacatgtgagcagtgtgcctctggctactgggacctggctagtgga
aaaggatgtcagatctgtgactgtgatccaaaaaactctcgaagcaaccagtgcaaccag
cttacaggccagtgtccatgtaagcgaggttacagcggaagatgttgcaatgaatgtgag
gaaaattactttggcaatccccagatgcattgcatttcgtgcgagtgtaacgaggaggga
accagccagcccaagtgtgacaaagccactggcgcatgtaactgccgcgctggcgtgact
ggccggttctgcgaccagtgtggccgtggctttgagaaagactttccctcttgccgccag
tgtcatctttgttttgatcagtgggacactgaaattactgcccttgctcagactgctcag
gggttaatgaggtttgctgcaaacctcgaagataaaggaggacgaatgcccagctgtgac
atgcggttcaaagcctttgcagatgccatttctgaaattgaaagaattttgagacatcct
gttctttcactggaggccctctcaggcatcaaggattttcagagctacgttcaacaaaaa
tttgcacaaatggatccccttcacagtacactctatgagtttcctgaccttaacaagaac
atagaagacattggggaagaagctgacctagtgtatgaacttctacaacagaaaatacat
ctgcatcaaagttttcattacttaaacctcaaagaggccatcagcaacattaggaaagac
tttgaagtatcattgctggcagaacagaagaccagtgggacaacccctattgtaagatac
tcagagtacaccaggaaccacgcgctcactatgttgggccatgaggccttcaaagcaagc
aatgtgctggaacagctcaaggtgatcaagagccccaacatccgaaacttgaatgaaaag
atctgcggtgtgccaggagaccagccctgtgtcacagcagcctgcggaggagctttgtgc
cgggacagtcatggactcaggcagtgcggtggcccaaactgcggcggagctcttcctctc
tccactgatgccttcaggaaagctgaggagactgctgtgttgctaaataacttgactact
cagctacaggaacctgagaatcaggttgaaaacattagaaaaatggcagaagacagcaag
ttgaaaggctcacaatttaatgggcaactggagagggctaagaatcaaattgaagttgac
ggagagatcactaaggagttcatccaaaaagtgaaagacttcttgctagatgagagcgcg
cctccagaagacattgagaaggtggcaaattacattctgcaaataaaccttcccctgact
ccacgagagctcacaggcatgcttggcaaaatgaggagcattatgaagcactgtgagaag
tacaaactgaatgcaaataagagaaacagaaaaagggaggaagctcggatgctgctggtg
gaggcacaagaagccaacaaagcagctaaagctcttccacctgtggatggaatgaataat
aaactaaaaaatgttgtgaagtcccaaggacactccaaaaacaccctcataaagctaaat
gaagagatacaaggcatcagagcacaaatctcacaggctgagaatcaagtgaacaagaca
aacgacgaactaaatgacttgtccgcaaaacagtctgagatggaagatgaaattgccaca
ttgcaggcaaaaatgctgatgaacaagaatcaagccagaaaggcaagagcaggggcagaa
gcagcacacaagcgagcccagaatattgataacgaatttgctgacattaaaagaaagtac
accgtccttcaagaaaagctaaaagcccaaggacctccaaaagtaacactagaaaaagtg
aagcagctgaaagaagaagcagaaaaactggttgaagagactgaaaaaaaaattaaaaga
ataacagatttggagaagaagcttcaggacctgaatcaaaccaaacaagacaaggcagag
caactgagacaactagaggaacaagtgatagccattaaaaatgaaatcacggagcaggaa
agcaagtatgcaacatgcaaaagttag
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integrated database retrieval system
