Gymnogyps californianus (California condor): 127029909
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Entry
127029909 CDS
T08687
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03271
Virion - Rotavirus
gcl04145
Phagosome
gcl04510
Focal adhesion
gcl04512
ECM-receptor interaction
gcl04514
Cell adhesion molecules
gcl04530
Tight junction
gcl04810
Regulation of actin cytoskeleton
gcl04820
Cytoskeleton in muscle cells
gcl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
127029909
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127029909
04514 Cell adhesion molecules
127029909
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127029909
09144 Cellular community - eukaryotes
04510 Focal adhesion
127029909
04530 Tight junction
127029909
09142 Cell motility
04820 Cytoskeleton in muscle cells
127029909
04810 Regulation of actin cytoskeleton
127029909
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127029909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127029909
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gcl04147
]
127029909
04515 Cell adhesion molecules [BR:
gcl04515
]
127029909
04090 CD molecules [BR:
gcl04090
]
127029909
Membrane trafficking [BR:
gcl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127029909
Exosome [BR:
gcl04147
]
Exosomal proteins
Proteins found in most exosomes
127029909
Cell adhesion molecules [BR:
gcl04515
]
Integrins
Integrin beta subunits
127029909
CD molecules [BR:
gcl04090
]
Proteins
127029909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
127029909
NCBI-ProteinID:
XP_050771682
LinkDB
All DBs
Position
2:complement(152049432..152096842)
Genome browser
AA seq
824 aa
AA seq
DB search
MQFSFFFLLIMINHTIWLSVSVFQSNLKLLTWAGVLCCLIWNGFAQQGGSDCIKANAKSC
GECIQAGPNCGWCKKTDFLQEGEPTSARCDDLAALKSKGCPMEDIENPRGSKQVLEDREV
TNRKIGAAEKLKPEAITQIQPQKLVLKLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSM
KDDLENVKSLGTALMFEMEKITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTS
PFSYKNVLSLTSEGNKFNELVGKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLV
FSTDAGFHFAGDGKLGGIVLPNDGKCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIF
AVTEEFQAVYKELKNLIPKSAVGTLSSNSSNVIQLIIDAYNSLSSEVILENSKLPKGVTI
SYKSFCKNGVNDTQEDGRKCSNISIGDEVKFEINVTANECPKKGQNETIKIKPLGFTEEV
EINLQFICECQCQSEGEPNSPACHEGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDA
YCRRENSTEICSNNGECICGQCVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGIC
KCRVCECFPNFTGSACDCSLDTFPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQ
TCLGVCAEHKDCVQCRAFDKGEKKETCSQECMHFNMTRVESRDKLPQPGQPDPLSHCKEK
DVDDCWFYFTYSVNSNGEANVHVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLL
MIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctttttttttcttactcattatgataaatcatacaatttggttatctgtt
tctgtatttcagagtaatttaaaattgctcacgtgggctggtgtcctctgttgcttgata
tggaatggatttgctcagcaaggtggaagcgactgcataaaagctaatgcaaaatcatgt
ggtgaatgtatacaagcaggaccaaactgtggttggtgtaaaaaaacagactttttgcaa
gagggagaaccaacatctgcccgatgtgatgacttggcagcactaaagagtaaaggctgt
cctatggaagatatagaaaatcccagaggtagcaaacaggtgcttgaagatagagaagta
acgaatcgtaagataggtgctgcagagaagctgaaaccagaggccattacacagatccag
ccacaaaaattagtactgaaactaagagtcggggaaccccaaacattttcattaaaattt
aagagagctgaagactaccccattgacctttattatcttatggacctctcctattctatg
aaagatgatttagagaatgtgaaaagtctcggaacggctctgatgtttgaaatggaaaaa
ataacttcagactttcgaattggctttggctcttttgtggagaaaactgtaatgccatat
ataagtacgacaccagccaaactcagaaatccttgtacaggtgaccagaactgtacaagt
ccatttagctataaaaatgtgctcagccttaccagtgaaggaaataaattcaatgaactt
gtaggtaaacagcacatttctgggaatttagattctcctgaaggtggatttgatgcaata
atgcaggttgcagtttgtggggaacaaattggctggagaaatgttacaagactattagtg
ttttccacggatgctggatttcactttgcaggagatggtaaacttggtggaattgtttta
ccaaatgatgggaaatgtcatctggaaaataatatgtacacaatgagccactattacgat
tatccctctattgctcatctggtacagaagcttagtgagaacaatattcagacaatcttt
gctgttactgaagagtttcaggcagtttataaggaattgaaaaatctgataccaaaatca
gcagtgggaacattgtcttcaaactccagcaatgtgattcagctgatcattgatgcatac
aattccctttcttcagaggttatcctggaaaacagtaagctaccaaaaggagtgacaatc
agttataagtctttctgcaagaatggcgtgaatgacacacaagaagatggaaggaaatgt
tctaacatttcaatcggagatgaggttaaatttgagattaatgtaacagctaatgaatgt
ccaaagaaaggacaaaatgaaacaattaaaattaaaccactgggattcactgaagaagtg
gaaattaatctccagttcatctgtgaatgtcagtgtcaaagtgaaggagaacctaatagt
ccagcttgccacgaaggaaatggaacatttgaatgtggtgcatgcagatgtaatgaagga
cgtattggaagactatgtgaatgtagtacagatgaagtaaatagtgaggatatggatgct
tactgcaggagggagaacagtacagaaatatgcagtaacaatggagaatgcatttgtgga
caatgtgtgtgcaagaaaagagaaaacaccaatgaagtgtattctggcaaatattgtgaa
tgtgataacttcaactgtgatcgatcaaatggtttgatttgtggaggaaacggtatctgc
aaatgcagagtgtgcgagtgttttcccaacttcactggcagcgcgtgcgattgttctttg
gatacttttccatgtatggcatctaatgggcagatttgcaatggaagaggaacctgcgaa
tgtggcacctgtaattgtacagatcccaaattccaaggccccacatgtgaaatgtgtcag
acttgcctcggtgtctgtgcagagcacaaggactgcgttcaatgcagagctttcgataag
ggagaaaagaaggaaacatgttctcaggaatgtatgcatttcaacatgacacgggtagaa
agtcgagacaagttgccacagcccggacagcctgatccgttgtctcattgcaaagagaag
gatgttgatgactgctggttctacttcacatattctgtcaactcaaatggtgaagccaat
gtccatgtggtagagactccagaatgccccagcggccctgacatcattcccattgtagct
ggtgtggttgctggaattgttcttattggacttgcattattattgatttggaaactacta
atgatcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaacgccaag
tgggatacgggtgaaaatcctatttacaagagtgcagtgacaactgtggtcaatcctaaa
tatgagggaaaatga
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