Gymnogyps californianus (California condor): 127029973
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Entry
127029973 CDS
T08687
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gcl00535
]
127029973
Proteoglycans [BR:
gcl00535
]
Extracellular matrix (ECM) proteoglycans
Others
127029973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4959
VWA_3
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
127029973
NCBI-ProteinID:
XP_050771796
LinkDB
All DBs
Position
2:complement(14145163..14272089)
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AA seq
1854 aa
AA seq
DB search
MLFRYEIQSCFFLAFLAVTAFFISDAQGQVSPPTRLRYNVVSPDSVQISWKAPKGQFTGY
KLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQNYALQIIAFSEDKESKPAQGQFRIKDI
ERRKETNKSKVKDPEKTNASKPAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVSAFNVGSEKTRVGLAQYSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGLA
LTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADIN
ELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTIVASLGAPSDLV
TSEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSLSTAVLKNLMSLTEYQI
AVFAIYSNVASEGLRGTETTLALPMASNLQLYDVSQSSMRAKWNGVAGATGYMILYAPLT
EGLAADEKEIKIGEASTDLELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPAN
LKFSDVGHSSAKLTWDPASKNVNGYRIMYVKTDGTETNEVEVGRVSTHTLKSLTSLTEYT
VAIFSLYDEGPSEPLTGSFTTKRVPAPQHLEIDEASTDSFRVSWKPTSSDIAFYRLAWVP
LDGGESEEVVISGDTDSHVIEGLLPNTEYEVSLLAVFDDESESEVVAILGATFARTTTIP
TTVTTTSTTTSKPTTAVFRTGIRNLVIDDETTSSLRVIWDISDYNVQQFRVTYLTAKGDR
AEEAVMVPGRQNTLLLQPLLSDTEYKVTITPIYSDGEGVSVSAPGKTLPLSAPRNLRVSD
EWYNRLRISWDAPPSPTMGYRIVYKPINIPGPALETFVGDDINTILILNLFSGTEYSVKV
FASYSTGFSDALTGVAKTLYLGVTNLDSYQVRMTSLCAQWQLHRHATAYRVVIESLVDGK
KQEVNLGGGTPRHCFFELMPGTEYKISVHTQLQEIEGPAVSIMETTLPFPTQPPTTPSTP
PPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDENFNKIISFLYSTVGALDKIGPDGTQVA
IIQFSDDPRTEFKLNAYKTKETLLEAIQQIAYKGGNTKTGKAIKHAREVLFTGEAGMRRG
IPKVLVVITDGRSQDDVNKVSREMQIDGFSFFAIGVADADYSELVNIGSKPSERHVFFVD
DFDAFTKIEDELITFVCETASATCPLVVKDGNNFAGFKMMEMFGLVEKEFSAVEGVSMEP
GTFNVYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILNEKY
EPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTTAKIII
DCKQVSEKTINAAGNISSDGIEVLGRMVRSRGPRDNSAPLQLQMFDIVCATSWANRDKCC
ELPGLRDEENCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGPRGE
IGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQGQR
GLPGKDGPTGPQGPPGPTGIPGTPGVPGVTGSQGPQGDVGAPGPPGAKGERGERGDLQSQ
AMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTITGPPGEPGRPGAPGPQGEQGS
PGMQGFPGSPGQPGRPGERGLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPGPPG
SPGPRGPTGHTGPPGSQGPSGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQLPHNSYQI
YDPEDLYDEFTPVREEMEAVELRSPGISRFTRKIAKRSVKTPGRKRANGKKPSQ
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcggtatgagatacagagctgtttcttcttggcttttttagctgtcacagct
ttcttcatcagtgatgcccagggccaagtgtccccaccaacaagactaagatataatgta
gtcagtcctgacagtgtacagatctcttggaaagcccccaaagggcaattcactggatat
aagcttcttgtcactccaagttcaggtggaaaaaccaatcagttaattcttcaaaacact
gcaaccaaagcaattattcaaggtcttattccagatcaaaactatgcccttcagatcatt
gcattcagtgaagacaaggagagtaagccagcacaaggccagttcagaattaaagatata
gagagaagaaaagaaacaaataaatccaaagtgaaggatccagaaaaaacaaatgcgagt
aaaccagctccagaaggaagcctgtttacctgtaaaactccagcaattgcagatattgtg
atactggtagatggttcttggagtattggcagattcaatttcaggctcgttcgactgttc
ctggaaaatctggtttccgctttcaatgtgggatctgagaaaacaagagtaggtcttgca
cagtacagtggtgatccccgaattgaatggcatttgaatgcctatggcacaaaagatgct
gttttggatgcagtccgtaatctaccgtataagggagggaatacattaacaggtcttgcc
ttaacttacattttggaaaacagctttaagcccgaagcaggtgcaagacctggagtgtct
aaaattggtatactgatcactgatgggaagtcccaagatgatgttatccctcctgctaaa
aacctacgagatgctggcattgagctgtttgctattggtgtgaagaatgcagatataaac
gaactcaaagagattgcctctgaacctgacagcacacacgtctacaacgttgctgacttt
aacttcatgcataccattgttgaaggtcttaccagaacagtgtgctcacgagtagaggaa
caggaaaaggaaatcaaaggaacaattgttgcttcacttggggctccttcggatttggtc
acatctgaggtaacagctagaggattccgggttagctggacccatgcaccaggcaaagtg
gaaaaatacagggttgtgtactatcccactcgaggaggacaaccagaagaggttgtggta
gatggaagcttatcaacagcagttctgaaaaacctgatgtctttaactgaataccagata
gctgtatttgctatatactcaaatgttgctagtgagggcctccgtggaactgaaactaca
cttgccttgccaatggcgtcgaatctgcaattgtacgatgtgtcacagagcagcatgaga
gcaaagtggaatggagtagcgggtgctacaggttacatgatcctatatgctcccctcacg
gaaggattggcagcagatgagaaggagataaaaattggggaggcctcaacagatcttgaa
ctggatggactattgccaaatacagaatatacagtcacagtttatgctatgtttggagaa
gaagctagtgatcctcttacaggacaagaaactacattgcctctaagtccaccagcaaac
ttgaaattttctgatgttggacacagtagcgctaagctaacatgggatcctgcttccaaa
aatgtaaatggctatcgcatcatgtacgttaaaacagatggaacagaaaccaatgaggtg
gaagttggtcgtgtttcaacccatactctaaaaagtctgacatcccttacagagtatact
gttgctattttctccctgtatgacgaaggaccatctgaaccacttactggcagctttacc
acaaaaagagttccagctccccagcatttggaaattgatgaagcatcaacagatagtttt
agggtcagctggaagcccacctcatcagatattgctttttacagattggcatgggttcct
ttggacgggggggaatctgaagaggttgtcataagtggagacacagacagtcatgttatt
gagggtttgttgcccaacacagaatatgaagtttctttgctggcagtttttgatgatgaa
agtgaaagtgaagtggttgctattcttggagctacatttgcaaggactaccacaatacct
accacagtgactactaccagtaccacaacttctaagcccaccacagcagtttttcgaaca
ggaatcagaaaccttgttatagatgatgaaacgacctcaagtctgagggtgatatgggac
atttcagattacaatgttcagcagttcagagtgacctatctcactgcaaaaggtgaccgt
gctgaggaagcggtaatggtgcctgggagacaaaacactcttctgcttcagcctctgctg
tctgataccgaatataaagttaccatcactcccatctattctgatggggaaggagtcagc
gtctcagctcctggcaaaactctacccctgtctgctcctagaaatttacgtgtctcagat
gaatggtacaacagattacgtatcagttgggatgccccgccatcaccaacaatgggttac
agaattgtctacaaacctatcaacattcctggtcctgcgttggagacctttgtaggggat
gatattaataccattctcattctaaatctcttcagtggaacggagtacagtgttaaagta
tttgcttcatactcaacaggcttcagtgatgccctaacaggcgtagccaaaaccttgtat
ctgggtgtgacaaatttggattcctatcaagtccgcatgactagtctctgtgcgcagtgg
cagcttcacagacatgctactgcatacagggtagttatagaatcgcttgtggatgggaaa
aagcaagaagtaaatcttggtggagggacgcctagacattgtttctttgagctaatgcct
ggaactgaatataaaatcagtgttcatacacagcttcaggagatagagggccctgctgta
agcatcatggagacaacattaccatttccaactcaaccgccaacaacaccttcaacacca
cctccaccacctacaatccctcctgcaaaagaggtgtgcaaagcagccaaagctgaccta
gcgttcctggtggatgggtcatggagtattggagatgaaaatttcaataaaataattagc
tttctctatagcactgttggagctttggataagattggtcctgatggaacgcaggtggca
ataattcagttcagtgatgatccccggacagaatttaaattgaatgcatacaaaacaaaa
gagactcttcttgaagctattcagcaaatagcctacaaaggaggaaatacaaaaacaggc
aaagccattaaacatgcaagagaagtcttgtttactggagaggcaggcatgagaaggggc
attccaaaagttttggttgtcattactgatgggcgatcacaggatgatgtgaacaaagtc
tccagagaaatgcaaatagatggtttcagcttttttgctattggagtagctgatgctgac
tattcagagttagttaatattggcagcaagcccagtgaaagacatgtcttctttgtggat
gactttgatgcctttacaaagattgaagatgagctgatcacttttgtttgtgaaactgca
tcagcaacctgcccattggtagttaaagatggcaacaattttgcaggatttaaaatgatg
gaaatgtttggtttggttgaaaaggagttttcagctgtggaaggggtttcaatggaacct
ggtacatttaatgtttacccatgttacagactgcacaaggatgccctggtgtcccagcct
accaagtatttgcatcctgaaggtcttccttctgattacaccattacgtttctctttcgt
atactgcccgacacacctcaggagccatttgctctttgggagattttaaatgaaaaatat
gaaccactggttggagttattttagataatggtggtaaaactctgactttctttaactac
gactacaaaggagattttcaaactgtgacttttgaaggtcctgaaataaggaagatattt
tatgggagttttcataagttgcatgttgttatcagcaagactacggccaaaataattatt
gactgcaagcaagtgagtgagaagaccattaacgcagcagggaatattagttctgatggc
atagaagtgctggggagaatggtcagatccagaggaccaagagacaactctgcgccattg
cagttacagatgtttgacattgtttgtgctacctcatgggccaatcgagacaaatgctgt
gagcttcctggcttgagagatgaggaaaattgccctgcccttcctcatgcttgttcctgt
tcagaagctaataagggtccccttggacctcctggaccaccgggtggtccaggtgtcaga
ggcgccaaaggtcatcgtggtgatccaggtccaaagggaccagatggacctcgaggtgaa
attggtgttcctggaccgcaaggacctccaggaccacaaggacccagtgggctttccatt
caagggcttccagggccgccaggtgaaaagggagagaagggagatcttggttttcctggc
ctgcagggtgtcccaggagcatcaggttcacctggaagagatggagctcaaggtcaaagg
ggccttcctggcaaagatggacccacaggcccacaaggacctcctggcccaacgggcata
cctggtactccaggtgttccaggtgttactggaagccaggggccacaaggtgatgttgga
gctcctggtcctcctggagctaagggtgaaaggggtgagcggggtgatctccagtctcaa
gcaatggtgcgtgctgttgctcgtcaagtgtgtgaacaactcatccagggtcatatggca
agatataactcaattctgaaccagattccaagccagtctgtctcaacacgaaccatcaca
ggacctcctggtgagccaggtcggccaggggctccagggccacagggtgagcaaggatca
ccaggcatgcaagggtttccaggaagccctggtcaaccaggaagaccaggagaaagaggt
ttaccaggcgagaaaggagaaaaaggcaatccaggtgttggaacacaaggaccccgaggc
ccaccaggatctacaggacctccaggagaaagtcgaactggcagcccgggaccaccagga
tctccaggcccgcgaggtcccactggtcacacaggacccccaggctcacagggtccttct
ggcccgccggggtactgtgatccatcctcctgcgctggttacggcatgggaggtggatac
ggtgagccaactgatcaagacatcccagtagtgcagttgccacataactcctaccaaatc
tatgaccctgaggacctttatgatgagtttactcccgttcgagaagagatggaagccgtt
gaactgagatccccaggaattagtcgcttcacgaggaagatagccaaaaggagcgtcaag
acgccagggcgcaaaagggcaaatggaaaaaaaccctctcagtga
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integrated database retrieval system
