Glutamicibacter creatinolyticus: GcLGCM259_0878
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Entry
GcLGCM259_0878 CDS
T05997
Symbol
rnj
Name
(GenBank) Ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gcr
Glutamicibacter creatinolyticus
Pathway
gcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GcLGCM259_0878 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcr03019
]
GcLGCM259_0878 (rnj)
Messenger RNA biogenesis [BR:
gcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GcLGCM259_0878 (rnj)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
BORCS8
Motif
Other DBs
NCBI-ProteinID:
QCY46634
UniProt:
A0A5B7WTR9
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Position
989566..991272
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AA seq
568 aa
AA seq
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MTESSVGKADTARLQTPAKLKKGTLRVVPLGGLGEVGRNMAVFEIDSKLLIVDCGVLFPE
EHQPGVDLILPDFSYIKDRLDDVVGMVLTHGHEDHIGAVPYLLRLREDIPIYGSKLTLAF
VEAKLAEHRLKANSTVVVEGEVTQIGPFECEYVAVNHSIPDALAVFIRTKAGTVLHTGDF
KMDQLPLDGRITDLRHFARLGEEGVDLFLPDSTNAEVPGFTVHEKDIGPVLEAQFAKARR
RIIVASFSSHVHRVQQVLDAAAIHGRKVAFIGRSMVRNMGIAERLGYLHVPQNVLVDLKQ
VEQLPDHKIVLMSTGSQGEPMAALSRMANGTHKVEVGAGDTVILASSLIPGNENAVFRVI
NGLMRLGAEVIHKGMAKVHVSGHASAGELLYCYNILRPKNVMPVHGETRHLIANGRLAAQ
SGVPEENVILAEDGSVIDLKDGVAQLVGQVDCGYVYVDGSKVGTITEDDLKDRVVLGEEG
FISVITVINRQNGTVITGPDIHARGVAEDDKVFDEIKPKIEAAIVEAVANNPSHTTHQLQ
QITRRVIGSWVSRKLRRRPMIVPVVLEA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcctctgtcggcaaggctgatactgcacggctgcagacacctgccaaactc
aagaagggcaccctgcgtgtggtcccgctcggcggtctgggcgaggtcggccgtaacatg
gcggtcttcgagatcgactcgaagctgctgatcgttgactgcggcgtgctcttccccgag
gagcaccagcccggcgtggacctgatcctgccggacttctcctacatcaaggaccgcctg
gacgacgtggtgggcatggtgctcacccacggccacgaggaccacatcggcgcggtgccc
tacctgctacgtctgcgcgaggacatcccgatctacggctccaagctgaccctggcgttt
gtggaggccaagctggccgagcaccgcctgaaggccaactccaccgtcgtggtggagggc
gaggtcacccagatcggcccgttcgaatgcgaatacgtggccgtgaaccactccatccct
gatgcgctggcggtgttcatccgcaccaaggccggaaccgtgctgcacaccggtgacttc
aagatggatcagctgccgctggacgggcgcatcaccgacctgcgccacttcgcccgtctg
ggcgaggagggcgtggacctgttcctgccggactccaccaacgccgaggtgcccggcttc
accgtgcacgagaaggacattggcccggtgctcgaggcacagttcgccaaggcccgccgc
cggatcatcgtcgcctccttctcctcgcatgtgcaccgcgtgcagcaggtgctggatgcc
gcggcgattcacggccgcaaggtcgccttcattggacgttcgatggtgcgcaacatgggc
atcgccgagcgcctgggctacctgcatgtgccgcagaacgtgctggttgacctcaagcag
gtcgagcagctgccggaccacaagatcgtgctgatgtccaccggttcgcagggcgagccg
atggccgccctgtcgcgcatggccaacggcacccacaaggtcgaggtcggcgccggggat
accgtgatcctggcctccagcctcatcccgggcaacgagaacgcggtgttccgcgtcatc
aacggcctgatgcgcctgggcgccgaggtgatccacaagggcatggccaaggtgcacgtc
tccgggcacgcctcggccggcgagctgctgtactgctacaacatcctgcgcccgaagaac
gtcatgccggtgcacggtgaaacccgccacctgattgccaacggccggctggccgcgcag
tccggggtgccggaggagaacgtgatcctcgccgaggacggttcggtcatcgacctgaag
gacggggtcgcccagctggtcggccaggtcgactgcggctacgtgtacgtggacggctcc
aaggtcggcaccatcaccgaggatgacctgaaggaccgcgtggtgctcggcgaggagggg
ttcatctcggtcatcaccgtgatcaaccgccagaacggcaccgtgatcaccggaccggac
atccacgcccgcggcgtggccgaggacgacaaggtctttgacgagatcaagccgaagatc
gaagcggcaatcgtggaggcggtggcgaacaacccgtcgcacaccacccatcagctgcag
cagatcacccgccgcgtcattggttcctgggtgtcgcgcaagctgcgccgacgcccgatg
atcgtgccggtcgtgctcgaagcgtaa
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