Glutamicibacter creatinolyticus: GcLGCM259_1036
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Entry
GcLGCM259_1036 CDS
T05997
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gcr
Glutamicibacter creatinolyticus
Pathway
gcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GcLGCM259_1036 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcr03021
]
GcLGCM259_1036 (rho)
03019 Messenger RNA biogenesis [BR:
gcr03019
]
GcLGCM259_1036 (rho)
Transcription machinery [BR:
gcr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GcLGCM259_1036 (rho)
Messenger RNA biogenesis [BR:
gcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GcLGCM259_1036 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
DUF7440
Motif
Other DBs
NCBI-ProteinID:
QCY46782
UniProt:
A0A5B7WSG0
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All DBs
Position
1175284..1177857
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AA seq
857 aa
AA seq
DB search
MTETTSLTEGVDNQTSTKSAGLASLKMVQLQQLASQLGITGGSRMRKAELVAAISSHQRG
GAVADREAKESAKSAPETGTDEAAQQLAKATRARRSTKPAADAEAAAESAEAPAEKKPAT
RRGSRRVTDSGKVSETADAPAQDTAAQPEPQGEAKAEEGEPRKKNTRRASSKAQAPAETS
ETPAKAEGGEKGETQDAEKDSTQREERGRGRNTRSRNRRDASQDAEQGSEASDEGQERGE
RQDRSERADRNDRNDRNGRGRNRRDQQDSSQDDSSEGEEGQERGERQDRSERNERNDRNG
RGRNRRDQQDSSQDDSSEGEEGQERGERQDRSERNERNDRNGRGRNRRDQQDSSQDDSSE
GEEGQERGERQDRSERNERNDRNGRGRNRRDQQDSSQDDSSEGEEGQERGERHERSDRND
RNDRGDRNDRNDRNERGRNRRERNRDRNERNRDRNERNQDRNRRNRRGDNDEPQLSEDDV
LLPIAGILDVLENYAFVRTSGYLPGPNDVYVTLGQVKKYNLRKGDAIVGAIRQPREGETP
NPRQKFNALVQLTSVNGKKPEDNKERVEFNKLVPLYPTERLRLETGAKQIGPRVIDLVAP
IGKGQRGLIVSPPKAGKTLILQSIAQAITTNNPEVHLMMVLVDERPEEVTDMQRTVKGEV
IASTFDRPADDHTTVAELAIERAKRLVEMGMDVVVLLDSMTRLGRAYNLAAPASGRILSG
GVDSAALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSR
QLAEKRIFPAVDVNASSTRREESLLSGDEVRIMWRLRRMLAGLDTQQALELLTKKIRDTE
SNAEFLMLVNKTTPQHN
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccacgagcctcaccgaaggcgtggacaaccagacttccaccaagagcgcc
ggactggcatccctgaagatggttcagctgcagcagctggcctcccagttgggcattacc
ggcggttcgcgcatgcgcaaggccgaacttgttgccgcgatcagctcgcaccagcgcggc
ggcgcggtcgccgaccgcgaagccaaggagtcggcgaagtcggcccccgagaccgggacc
gatgaggccgcgcagcagctggcaaaggccacccgcgcccgccgcagcaccaagcccgcc
gccgatgccgaggccgccgccgagagcgccgaggccccggccgagaagaagccggccacc
cgccgcggctcccgccgggtcaccgactcgggcaaggtctccgagaccgccgacgccccg
gcacaggacaccgcggcccagcccgagccgcagggcgaggccaaggccgaggaaggcgag
ccgcgcaagaagaacacccgccgcgcctcatccaaggcccaggctccggccgagacctcc
gaaaccccggccaaggccgagggcggggagaagggcgaaacccaggacgccgagaaggac
tcgacccagcgcgaggagcgcggccgcggacgcaacacccgttcgcgcaaccgccgcgat
gccagccaggacgccgagcagggcagcgaggccagcgacgagggccaggagcgcggtgag
cgccaggaccgttccgagcgcgcggaccgcaatgaccgcaacgaccgcaatggccggggc
cgaaaccgccgcgaccagcaggactcctcccaggacgatagctccgagggcgaggaaggc
caggagcgcggtgagcgccaggaccgttcggagcgcaatgaacgtaatgaccgcaatggc
cggggccgcaaccgccgcgaccagcaggactcctcccaggacgatagctccgagggcgag
gaaggccaggagcgcggtgagcgccaggaccgttcggagcgcaatgaacgtaatgaccgc
aatggccggggccgcaaccgccgcgaccagcaggactcctcccaggacgatagctccgag
ggcgaggaaggccaggagcgcggtgagcgccaggaccgttcggagcgcaatgaacgtaat
gaccgcaacgggcggggccgcaaccgccgcgaccagcaggactcctcccaggacgatagc
tccgagggcgaggaaggccaggagcgcggtgagcgccacgagcgttcggaccgaaacgat
cgcaacgaccgcggggaccgcaacgaccgcaatgatcgcaacgagcggggccgcaaccgc
cgcgaacgcaaccgcgaccgcaatgagcgcaaccgggaccgcaatgagcgcaaccaggac
cgcaaccgccgcaaccgccgcggggacaacgacgagccgcagctgagcgaggacgacgtc
ctgctgccgatcgccggcatcctggacgtgctggagaactacgcgttcgtgcgcacctcg
ggctacctgcccggcccgaacgacgtgtacgtcaccctgggccaggtcaagaagtacaac
ctgcgcaagggcgacgcgattgttggcgcgatccgccagccgcgcgagggcgagaccccc
aacccgcgccagaagttcaacgccctggtgcagctgacgtccgtgaacggcaagaagccg
gaagacaacaaggagcgcgtcgagttcaacaagctcgtgccgctgtacccgaccgagcgc
ctgcgcctggaaaccggggccaagcagatcggtccgcgcgtgatcgacctggtcgccccg
atcggcaagggccagcgtggcctgatcgtctccccgcccaaggccggcaagaccctgatc
ctgcagtccatcgcgcaggcgatcaccaccaacaacccggaagtgcacctgatgatggtg
ctcgtggacgaacgtcccgaggaagtcaccgacatgcagcgcacggtgaagggcgaggtc
atcgcctcgaccttcgatcgcccggccgatgaccacaccaccgtggccgaactggccatc
gagcgcgccaagcgcctggtggagatgggcatggacgtggtcgtgctgctggactcgatg
acccgcctgggccgcgcctacaacctggccgccccggcctcgggccgcatcctctccggt
ggtgtggactccgccgccctctacccgcccaagcgcttcttcggcgccgcgcgcaacatc
gaaaacggcggctcgctgaccatcctggccactgccctggtggaaaccgggtcgaagatg
gatgaagtgatcttcgaggagttcaagggcaccggcaacatggagctgcgcctttcacgc
cagctggccgagaagcgcatcttcccggcggtggacgtcaacgcgtcctccacccgccgc
gaggagtcgctgctctccggcgacgaggtgcgcatcatgtggcgcctgcgccgcatgctg
gccgggctggacacccagcaggcgctggagctgctgaccaagaagatccgggacaccgaa
tccaacgcggagttcctgatgctggtcaacaagaccacgccgcagcacaactag
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