Glutamicibacter creatinolyticus: GcLGCM259_1597
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Entry
GcLGCM259_1597 CDS
T05997
Name
(GenBank) Ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gcr
Glutamicibacter creatinolyticus
Pathway
gcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GcLGCM259_1597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcr03019
]
GcLGCM259_1597
03009 Ribosome biogenesis [BR:
gcr03009
]
GcLGCM259_1597
Enzymes [BR:
gcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GcLGCM259_1597
Messenger RNA biogenesis [BR:
gcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GcLGCM259_1597
Ribosome biogenesis [BR:
gcr03009
]
Prokaryotic type
rRNA processing factors
GcLGCM259_1597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
QCY47326
UniProt:
A0A5B7WTC4
LinkDB
All DBs
Position
complement(1814973..1818107)
Genome browser
AA seq
1044 aa
AA seq
DB search
MSASKERKSGSGGNKRGNRSTRARRTTVATTPARPLRQAMTLAELNAAAGVEPTGTRMRV
TRRTPVSTPDTARMNRQTERRQRATQADAEASANETSTDKASAAQGGQDTDRKQAPAESH
QPKTSKAPRQQEPTAATEAVAESTGSTETTETTETDVAAEASESGAAKENEDHTGALLAQ
HGSTMMINPFAVPEAAHTVVRHAIPKTKQQAEAEQRGEEHHDEDADEVTSRRRRRRRRGE
VDLELDGGSQDDPPNTVTRVRAPRASLDTPVSNKVTSVRGSTRLEAKRQRRRESRETGRR
RQVITEAEFLARRESVERQMIVRQREDRIQIGVLEDGVLAEHFVSKTQQDSLIGNVYLGK
VQNVLPSMEAAFVDIGRGRNAVLYAGEVNWDVAALEGQPRRIENALKAGDSVLVQVTKDP
VGHKGARLTSQVSLPGRYLVYVPGGSMTGISRKLPDVERQRLKKILKDHLPENAGVIVRT
AAEGASEEELMNDINRLRAQWEGIEEQSKSNKTLAPELLHSEPDLTIKVVRDVFNEDFTK
LIVSGTQAWDTIEAYVMYVAPDLMGRLEQWKNEEDIFAHYRIDEQINKALDRKVFLPSGG
SLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGGIIVIDFI
DMVLEANRDLVLRRLIECLGRDRTKHQVAEVTSLGLVQMTRKRMGTGLLEVFGEACEVCA
GRGVITHEEPVEHRKSYNSHGESHAKKNQEPKSSRSRRRRGGSSGQEETKPTEQRATQET
ESDEKSEAARSALASIAAASHLTEAEEAEAQQESGKDQAPVSLEQLEAALPGQDRDEETG
EQKPRKQRRRPRSRSRNGQGAETAEQQPGEEAAGAPQQEAGQGDQPAAEQQAEQAPAQAV
PERAESGEDKRPARTKRGSRRAGSPAGSASGAVSEQPLLTGLALPADTIEAPAQAAAQSA
AAQQPVVQSSAPAAPQSSTKPKRRSRRATSAQGDANAEVVVSEVATAQGNRVQMDTSSKP
SETPAEPAAKPVMLGVGVPVRELK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatcaaaagaacgcaagagtggttccggaggaaataagcgtggcaaccgttcg
actcgtgcccggcgcacgaccgtagccaccaccccggcccgcccgctgcgccaggcaatg
accctggccgaactgaacgcggccgccggtgtggaacccaccggcacccgcatgcgggtc
acccgccgcaccccggtctccaccccggacaccgcgcgaatgaaccgccagaccgaacgc
cgccagcgtgccacccaggccgacgccgaggccagcgccaacgagaccagcacggacaag
gccagcgcggcccagggcggccaggacaccgaccgcaagcaggccccggcagagtcccac
cagcccaagacgtccaaggcgccccgccagcaggaaccgaccgcggccaccgaggcagtt
gccgaatccaccgggtcgaccgaaaccaccgaaaccaccgaaacagatgtcgccgctgaa
gccagcgaaagcggcgcagcgaaggaaaacgaggaccacacaggcgccctgctcgcgcag
cacggcagcaccatgatgatcaatcccttcgccgtgcccgaggcggcccacacggtcgta
cgccacgccatccccaagaccaagcagcaggccgaagccgaacagcgcggggaggaacac
cacgacgaggacgccgatgaggtcacctcacgccgtcggcgtcgccgccgtcgcggggaa
gtggatctggaacttgatggcggttcgcaggatgacccgccgaacaccgtcacccgggtg
cgtgccccgcgcgccagcctggacaccccggtctccaacaaggtcacctcggtgcgtggt
tccacccgtctggaagccaagcgccagcgccgccgcgaatcgcgggaaaccggtcgtcgc
cgtcaggtgatcaccgaggcagagttcctggcccgccgcgagtcggtggaacgccagatg
atcgtgcgccagcgcgaggaccgcatccagatcggtgtgctggaggacggggtgctggcc
gagcacttcgtgtccaagacccagcaggattccctgatcggcaacgtgtacctgggcaag
gtccagaacgtgctgccctccatggaggccgcgttcgtggatatcgggcgcggacgcaac
gccgtgctgtacgccggcgaagtcaactgggacgtcgcagccctggagggccagccgcgg
cgcatcgaaaacgcgctgaaggccggcgactcggtgctggtgcaggtgaccaaggacccg
gtgggccacaagggtgcccgcctgaccagccaggtctccctgcccggacgctacctggtg
tacgttcccggcggttcaatgaccggcatctcccgcaagctgccggacgtggagcgccag
cggctgaagaagatcctgaaggaccacctgccggagaacgcgggcgtcatcgtgcgcacc
gccgccgagggtgccagcgaggaagagttgatgaatgacatcaaccgcctgcgtgcccag
tgggagggcatcgaggaacagtccaagtcgaacaagaccctcgccccagaactgctgcac
tccgaaccggacttgaccatcaaggtcgtgcgcgatgtgttcaacgaggacttcaccaag
ctgatcgtctccggcacccaggcctgggacaccatcgaggcctacgtgatgtacgtggcc
ccggacctgatgggccgcctggagcagtggaagaacgaagaggacatcttcgcccactac
cgaatcgacgagcagatcaataaggcgctggatcgcaaggtgttcctgccctccggcggt
tcgctggtcatcgaccgcaccgaggcgatgaccgtggtggacgtgaacaccggcaagttc
accggctcgggcggcaaccttgaggaaaccgtcaccaagaacaacctggaggcggccgag
gaggtcgtgcgccagctgcgcctgcgcgacatcggcggcatcatcgtcatcgacttcatc
gacatggtgctggaggccaaccgggacctggtcctgcgccggctgatcgagtgcctgggc
cgcgaccgcaccaagcaccaggtcgccgaggtcaccagcctgggtctggtgcagatgacc
cgcaagcgcatgggcaccggcctgttggaagtcttcggggaggcttgcgaggtctgcgcc
ggacgcggggtgatcacccacgaggagccggtggagcaccgcaagagctacaactcgcac
ggtgaatcgcacgccaagaagaaccaggaacccaagtccagccgttcccggcgccgccgc
ggcggctccagcggccaggaggaaaccaagcccaccgagcagcgggccacccaggaaacc
gagagcgacgagaagagcgaggccgcacgcagcgccctggccagcatcgccgcggcctcg
cacctgaccgaggccgaggaagcggaagcccagcaggaatccggcaaggaccaggctccg
gtgagcctggagcagctggaagccgccctgccgggccaggatcgggatgaggagaccggc
gagcagaagccgcgcaagcagcgtcgccgcccgcgttcgcggtcccgcaacggccagggc
gccgagaccgccgagcagcagcccggcgaggaggctgccggtgcaccgcagcaggaggcc
gggcagggcgatcagcccgccgccgagcagcaggccgagcaggctccggcccaggccgtg
cccgagcgcgccgagtccggcgaggacaagcgcccggcacgcaccaagcgcggttcgcgc
cgtgccggcagccccgccgggtccgccagcggtgcggtcagtgagcagccgctgctgacc
gggctggccctgccggccgacaccattgaggcgccggcccaggccgccgcgcagtccgct
gccgcacagcagccggttgtgcagtcgtccgcgccggccgccccacagagttccacgaag
ccaaagcgccgcagccgccgggccacctcggcccagggggatgcgaacgcggaggttgtc
gtgagcgaagtagccactgcccagggcaaccgggtgcagatggatacgtccagtaagcca
agcgaaactcccgccgagccggccgccaagccggtcatgctcggggtcggggttccggta
cgcgaactgaaatga
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