Glutamicibacter creatinolyticus: GcLGCM259_2366
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Entry
GcLGCM259_2366 CDS
T05997
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
gcr
Glutamicibacter creatinolyticus
Brite
KEGG Orthology (KO) [BR:
gcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcr03019
]
GcLGCM259_2366
Enzymes [BR:
gcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GcLGCM259_2366
Messenger RNA biogenesis [BR:
gcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GcLGCM259_2366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
Helicase_RecD
ResIII
AAA_30
AAA_19
Cas3-like_C_2
UvrD-helicase
AAA_11
ParA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCY48073
UniProt:
A0A5B7WY40
LinkDB
All DBs
Position
complement(2645798..2648374)
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AA seq
858 aa
AA seq
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MVNRASAPFDLAAIGRGLAFGPAHTQISRRLGDAVDAPLVIQAPPGSGKTTIVPPTVANA
LAAAGLGGRVIVTQPRRMAARAAARRLAQLDGSELGERIGFSVRGQSLSGPRTRIEFVTA
GLLLRRLLADPDLASVGAVIVDEVHERSIETDLVLAMLNQVNQLRDDLALLVMSATLHAE
DLAGYLGRGAAAGIISGSGIQHPVAEEFCSYSGTRNAERGLERGYLDHVAATAVEQTARN
TAQGPARDTLVFVPGAGEVERVRALAAGDPRFEVLALHGQVEAAAQDAILQDPGPAARPR
IIISTPIAESSLTVPRVNLVVDAGYAREPRRDAVRGMSGLVTVVASRASATQRAGRAGRL
EPGRVVRTLDQRSFAAAPAFTSPQIATAELTQAALYLAAWGTPRGEGLELWQQPPAAALD
DAESVLRSLGAIDETGQLTPAGQRLVQVPADPRLARALLEGARHFGPRAAAEAVAMLSGT
ERAGGADAGALLRELRRGGHPGHGPWAAETRRFAQLLRRQQAPAEVAPTPGAGAESAALA
GVMALAYPQWVGRLVAGDEYLLASGTRASLPRHSPLHGHEFLAIADVARAGAGAVIRSAA
GIELELLLELLPQMHRVQTRAEFTAGKVSARQVQLLGAIELSTRPVKPTAEQAGAAVLRA
LQAEGLGIFGQQPKFQALRARLALAHRELGEPFTAMDEPALLQRADEWLQEGLLQMARGT
AAAKVDLAQALRSLIPWQHAHDLDELLPERLQVPSGSRIALQYPEPGTAQGRVVAAVKLQ
ECFGLAQTPRLLHGQVPIQFHLLSPAGRPLAVTDDLRSFWDGPYRQVRAEMRGRYPKHPW
PENPWEHVATAKTKNRLR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaccgcgccagcgccccctttgaccttgccgcgatcggccggggccttgccttc
ggcccggcgcacacccaaatcagccgacgcctgggcgacgcggtggatgccccgctggtc
atccaggccccgccgggctccggcaagaccacgatcgtgccgcccaccgtggccaacgcc
ctggccgccgcagggttgggcggacgggtgatcgtcacccagccgcgccggatggcggca
cgggccgcggcccgccgcctggcccagctggacggcagcgaactgggggagcggatcggc
ttctcggtgcgcgggcaaagcctgagcggtccgcgcacccgcattgagttcgtcaccgcc
gggctgctgctgcgccggctgctggccgacccggacctggcctcggtgggcgcggtgatc
gtcgatgaggtccatgagcgctccattgaaaccgacctggtgctggcgatgctcaaccag
gtcaaccagctgcgcgatgacctggccctgctggtgatgagcgcaaccctgcacgccgag
gacctggccggctatctggggcgcggggcagcggccgggatcatttccgggtccggcatc
cagcatccggtcgccgaggaattctgttcctacagcggcacccgcaacgccgaacgcggg
ctggagcgtggctacctggaccacgtggcggccaccgccgtcgagcagaccgcccgcaac
accgcccagggcccggcccgggacaccctggtgttcgtgcccggggccggggaggtggag
cgggtgcgggcgctggcggccggcgatccgcgctttgaggtcctggccctgcacgggcag
gtcgaggccgcggcgcaggatgcgatcctgcaggacccgggccctgcggcgcggccgcgg
atcatcatttccaccccgatcgccgaatcctccctcacggtgccgcgggtgaacctggtg
gtggacgccgggtacgcccgggaaccgcggcgggacgcggtgcgcgggatgagcgggctg
gtcaccgtggtggccagccgcgcctcggccacccagcgggccggccgtgccggacgcctg
gagcccggccgggtggtgcgcaccctggatcagcgttccttcgccgccgccccggccttc
accagcccgcagatcgccaccgcggagctgacccaggcggcgctgtacctggcggcgtgg
gggaccccgcgcggggaggggttggagttgtggcagcagcctccggccgccgcgttggat
gatgccgaatccgtgctgcgctcattgggcgcgatcgacgagaccgggcagctgacccct
gccgggcagcgcctggtgcaggtgccggccgacccgcggctggcccgcgccctgctggaa
ggggcacggcacttcgggccccgcgcggccgccgaggcggtggccatgctcagcggcacc
gaacgggccggcggcgccgatgccggggcgctgttgcgcgaactgcgccggggcgggcat
cctggccacggcccctgggccgccgaaacccggcgctttgcccagctgctgcgccggcag
caggccccggccgaggttgcgcccaccccgggggcgggcgcggaatccgcggcgctggcc
ggggtgatggccctggcctacccgcagtgggtggggcggctggtggccggggacgagtat
ctgctggcctcgggcacccgggccagcctgccgcgccacagcccgctgcacgggcatgag
ttcctggccatcgccgatgtggcccgcgccggggccggggcggtgatccgctccgccgcc
gggatcgagttggagctgctgctggaactgctgccgcagatgcaccgggtgcagacccgg
gccgagttcacggccgggaaggtgagcgcgcggcaggtacagctgctgggcgccatcgag
ctttcaacccgcccggtcaaacccaccgccgagcaggccggggccgcggtgctgcgggcg
ctgcaggccgagggcctggggattttcgggcagcagccgaagttccaggcgctgcgcgcc
cgcctggcgctggcgcaccgggaactgggcgaaccgttcacggccatggatgaaccggcg
ttgctgcagcgggctgatgagtggctgcaggaggggctgctgcagatggcccgggggacc
gcggcggcaaaggtcgacttggcccaggcgctgcgctcgttgattccctggcagcacgcc
catgacctggatgagctgctgcccgagcggctgcaggttcccagcggctcgcgcatcgcc
ctgcagtacccggagccgggcacggcgcagggccgggtggtggcggcggtgaagctgcag
gaatgcttcgggctggcccaaacgccgcggctgctgcacggacaggtgccgatccagttc
cacctgctctccccggccggccggcccctggcggtcaccgatgacctgcgcagtttctgg
gatggcccgtaccgacaggtgcgcgcagagatgcgcgggcgctatcccaagcatccgtgg
ccggaaaacccctgggagcacgtggccaccgcaaaaaccaaaaaccggttgcgctag
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