Gracilibacillus caseinilyticus: MUN88_05555
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Entry
MUN88_05555 CDS
T09432
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs03030
DNA replication
gcs03430
Mismatch repair
gcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN88_05555 (dnaX)
03430 Mismatch repair
MUN88_05555 (dnaX)
03440 Homologous recombination
MUN88_05555 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcs03032
]
MUN88_05555 (dnaX)
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_05555 (dnaX)
Enzymes [BR:
gcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUN88_05555 (dnaX)
DNA replication proteins [BR:
gcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUN88_05555 (dnaX)
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUN88_05555 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
DnaX_C
RuvB_N
AAA_30
TIP49
AAA_22
AAA_19
PIF1
AAA_assoc_2
RCF1-5-like_lid
AAA_24
DUF4709
AAA_14
AAA_16
Mg_chelatase
AAA_2
DUF6594
DUF4407
SlyX
Motif
Other DBs
NCBI-ProteinID:
UOQ49550
LinkDB
All DBs
Position
complement(1125535..1127238)
Genome browser
AA seq
567 aa
AA seq
DB search
MGYQALYRVWRPKNFEDVVGQVHITRTLQNAVMQDKFTHAYLFSGPRGTGKTSAAKIFAK
AVNCQNGPALEPCNACDACIGIQDGSISDVVEIDAASNNGVEQIRDIRDKVKYAPSAVTY
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFVLATTEPHKIPLTIISRCQRFDFKRIAQ
SAMVERMKKIIAAENISVTDEALEGVALSAEGGMRDALSLLDQAISYSEEQVTIDDVLAV
TGSVSQAKLAKIVNTMHENEVKESLLEIDAMIQEGKDPGRFVFDLIYYLRDILLYQTASS
LENVLERAIVDDAFQSLAQSLDSQWIQGAIKELNLCQQEIKWTNSPKVFIEVAVLKICNQ
SNSTQTNVASLPEVEKLQEKLTKLEQQLSQLQKQPVQQQQETQQQAPKRNASVGRNSYKV
PYDRIRNVLNGASKEAIKKIRAQWPSFMDALKKQSAPAHATIQNSKPSAASEDVVVIAFR
YEIHCSLALEHKQTIELMLSESTGQNITFIPIPESEWASLREEYVRKQKAQGEESGEQDE
SSVQTEGDPLVDNARKLVGDDLLEIRD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggctatcaagcattataccgtgtctggcgtccgaagaattttgaagatgtagttgga
caagtacatattactcgcaccttgcaaaatgctgttatgcaagacaagttcacccacgct
tacctattttcaggtccccgaggcacgggaaaaacaagtgctgccaaaatttttgccaaa
gcagtcaattgtcaaaatggtcctgcattagagccatgtaatgcatgtgatgcgtgtatt
gggattcaggatggttcgatatcagatgtggttgagatcgatgccgcctcgaataatggt
gtggaacagattcgtgatattcgtgataaagtgaaatatgctccgagcgccgttacgtat
aaggtgtatatcattgatgaggtgcatatgctatcgattggtgcctttaatgccttattg
aagacactggaagagccaccaaagcacgttatctttgtattggcaaccaccgaaccacat
aaaataccactaacgattatttccagatgtcagcgatttgactttaaacgaattgcacag
tctgcaatggttgagcgcatgaaaaaaattattgcagcagaaaatatatcggtaacagac
gaagcactggaaggtgttgcactatcggcagaaggtggtatgcgtgatgcgttaagcttg
cttgatcaggctatttcctatagtgaggaacaagtgacgatcgatgacgttctcgctgta
actggttctgtatcccaagcaaaattagcgaagatcgtaaacacgatgcacgagaatgag
gttaaggaatcgttgctggagatcgatgccatgattcaagaagggaaagatcctggccga
tttgtttttgaccttatctattatttgcgagatattttgttatatcagactgcatcatct
ttagaaaatgtgctggaacgagctattgttgatgatgcgtttcaatcattggcgcaaagt
ttagattcccaatggatccaaggagccattaaagaactgaatctgtgccaacaggaaata
aagtggacaaacagcccgaaagttttcatagaagttgcagtgttgaaaatctgtaaccaa
agtaatagcacccagacgaatgtggcatctttacctgaagtagagaagttacaggaaaaa
ttaacgaagctggagcaacaattaagccaattgcaaaaacaacctgttcagcaacagcag
gaaacacaacagcaggctccaaaacgaaatgcatctgtcggccgaaacagctataaagtg
ccatatgatcgtattcgtaacgtgctgaacggtgcatcgaaagaagctatcaaaaaaata
agagcccagtggccgtcctttatggatgcattgaagaaacaaagtgctcctgcgcatgca
acgattcagaatagtaagccaagtgcagcatcagaagacgttgtagtgatagcatttcgt
tatgaaattcattgttcacttgcattagagcacaaacaaacgatagaattaatgttatca
gagtcaaccggacagaatatcaccttcattccaatacctgaatcggaatgggcatcatta
cgagaagagtatgttcgcaaacaaaaagcgcaaggtgaggagtctggagaacaggatgaa
tcttctgttcagacagaaggggatccactggtagacaacgctagaaagttagtcggcgat
gatttattagaaatacgtgattaa
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