Gracilibacillus caseinilyticus: MUN88_09675
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Entry
MUN88_09675 CDS
T09432
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MUN88_09675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcs03000
]
MUN88_09675
Transcription factors [BR:
gcs03000
]
Prokaryotic type
Helix-turn-helix
Other families
MUN88_09675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
TPR_2
TPR_8
TPR_7
TPR_14
TPR_1
CNOT10_TPR
TPR_MalT
TPR_19
Fis1_TPR_C
TPR_10
HTH_26
HTH_92
Csm6_6H
YjcZ
TPR_16
Sigma70_r4
TPR_YpiA_C
Motif
Other DBs
NCBI-ProteinID:
UOQ50298
UniProt:
A0ABY4F2J7
LinkDB
All DBs
Position
complement(2038921..2040174)
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AA seq
417 aa
AA seq
DB search
MKYDRGKIVKKYRKLRGWSQTQLGNEVGASTSAISKLESGKSTPSEEIMNNIQQVLNIRE
ITYAEYHPLLQKLNAWQKSISMGNHKIADSYHHEFKDLSIRSLHDQTGLYSLCHFRYALM
KFNLDYAGAFLEDVKKHADVIPASYSYHYYKSLGCYYLLRSQMADAWTYLKVAAKLDKEQ
FNHDGEIHLYYALAYYFRENFADSHQHAIKALILFQDKMNQPNILYSRFLVIKNQIRKEA
TTTIIEQLHTILDNYPSTHKYYIYYLISSAYMQQDDYEQALKYIRKALHHETNPFFRERY
LYLYAYIYALMGDVEMTITMINGGLKMAISEKYQYRFYILKEIVQRTYGSESFRKRVSEE
IIPFYQSNGDVVEAKYCHAILGDVYYRLRSYKQACKHYYVFPGNRFISHLLQKYPVK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtatgatcgaggaaaaattgtaaagaaataccgaaaattgcgaggctggtcacaa
acgcagttaggtaatgaagtaggagccagtacctctgcgattagtaagctggaatctgga
aaatcaacaccctctgaagaaatcatgaacaatatccagcaagttctcaatattagagaa
attacttacgcagaataccatccacttctccagaaattaaacgcctggcaaaaaagcatt
tcgatgggtaatcacaaaatcgcggatagctatcaccatgaattcaaagacttatccatc
cgctcccttcatgatcagacaggcttatattcgctttgtcatttccgttatgcactgatg
aaattcaacctcgattatgccggagctttcctagaggacgtaaagaaacacgccgacgtt
attcccgcatcgtacagttaccactattataaatcactcggttgttattatttactccgc
tcgcaaatggcagacgcctggacctatttgaaagtcgcagcaaaattggacaaggagcaa
tttaatcacgatggagaaattcatttatattatgcacttgcctactacttccgcgagaat
tttgctgattctcatcaacatgctataaaagcgctcatcctttttcaagacaaaatgaac
cagccgaatatattgtattcccgcttcctcgtcatcaagaaccaaatccgcaaagaagcg
acgacaaccatcatcgaacaattacacactatccttgacaactacccaagcactcacaaa
tactacatctattacttaataagctctgcctatatgcaacaagacgattatgaacaggca
ttgaagtatattcgcaaagcactccatcatgaaacgaacccatttttcagagaaagatat
ctgtacctttatgcatacatatacgcattaatgggcgatgtggagatgacaattacgatg
atcaatggtggcttgaagatggcgatatcggagaaatatcagtaccgcttctatatttta
aaagaaattgtgcagcgcacatatggatcagaatccttccgcaaaagagtaagtgaggag
atcatccctttttaccaatcaaatggtgatgtcgtcgaagctaaatattgccatgctatc
ttgggtgatgtctattaccggctgagatcctataaacaggcgtgtaagcattattacgtt
tttcccggtaaccgatttatttcacacttgctgcagaagtatccggtcaagtaa
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