Gracilibacillus caseinilyticus: MUN88_11905
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Entry
MUN88_11905 CDS
T09432
Name
(GenBank) hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gcs
Gracilibacillus caseinilyticus
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcs03019
]
MUN88_11905
Messenger RNA biogenesis [BR:
gcs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MUN88_11905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
UOQ46801
LinkDB
All DBs
Position
complement(2552417..2553637)
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AA seq
406 aa
AA seq
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MNYFYDMIDITYELTDEQKQMITTKFPAPTFPEAIQGVQLNQLTKGNSVKARVLLNEFEV
KKTKTNKSFLKVQFSDQSGTISAKMWDNNGEVEQMLPILDQVGVFDIRGQVDEFNGFKSV
TIYEMTPCEEKIDPSTLLAYTKQDIEALTEELFAYLLELKKPYQDIAIKAMEHLWEAFRI
SPAAKGFHHNYLGGLLKHTIGLMRFCRYITVQSDNPFRAVMKLIHKVETEYKQEIWNGLK
EDNPRPSFVWKDTIDHLYHMLLGMAEYKYEDINYDALMTSILFHDIGKLAEYDYAGKSID
IFHFLFPTAAFENGNRKQAGIAMDPLGVTVGHIPYGVLVLSQLIEKENISISMEAIHLMT
HCILCHHGLPEWGSAVRKPTNLEGYIIHIVDYLDSRYENTEADEEK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaactatttttatgatatgatcgatattacatatgaactgacggatgaacaaaagcaa
atgatcacaaccaaatttcctgcacctacatttcctgaagcgattcaaggtgtacaatta
aatcaattaacaaaaggaaactcagtaaaagcgcgagtcctgttaaacgaattcgaagta
aaaaaaacaaaaacgaataaatctttcttaaaagtacaatttagtgatcaatctggcacc
atttccgccaaaatgtgggataacaatggtgaagtagagcagatgttgcccattttggat
caagtcggtgtctttgatatccgcggacaagttgatgaattcaacggcttcaaaagtgtc
accatatacgaaatgactccatgtgaggaaaagatagatccttccacactgctcgcgtat
acgaaacaagacattgaggcattaaccgaagaactttttgcctatctgcttgaattaaaa
aaaccgtatcaggatattgccatcaaagctatggaacacctgtgggaagcttttcgcatc
agccctgccgctaaaggatttcatcataattatcttggtggcttgttaaagcatacgatc
ggtttaatgcgattctgtcgatatatcacagtgcaatcggataatccttttcgagcagtc
atgaagttaatacataaggtagaaaccgaatataaacaagaaatctggaatggcctgaaa
gaggataatcctcgtccttccttcgtctggaaagatacgatagaccatctctatcacatg
ttattaggaatggcagaatataaatacgaggacattaattatgatgctttaatgacaagc
atactctttcacgatattggaaaactggcggaatatgattatgccggcaagtctatcgat
attttccatttccttttcccaactgccgcatttgaaaatggcaatcgaaagcaggcaggt
atcgcgatggatcctttaggcgtaacagttggtcatatcccttatggtgtgcttgtttta
tcacaacttattgaaaaagagaacatttcgattagtatggaagctattcacctaatgacc
cattgcatcctttgtcaccacggcctgccagaatggggcagcgccgttcgcaaacctact
aatctagaaggctatattattcacatcgtagattatctcgatagccggtatgaaaataca
gaagcagatgaagagaaataa
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