Gracilibacillus caseinilyticus: MUN88_12225
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Entry
MUN88_12225 CDS
T09432
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs03420
Nucleotide excision repair
gcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MUN88_12225
03430 Mismatch repair
MUN88_12225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_12225
Enzymes [BR:
gcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUN88_12225
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUN88_12225
MMR (mismatch excision repair)
Other MMR factors
MUN88_12225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_22
UvrD_C_2
Viral_helicase1
PhoH
DEAD
AAA_30
AAA_16
NACHT
ResIII
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
UOQ46859
LinkDB
All DBs
Position
2602554..2604893
Genome browser
AA seq
779 aa
AA seq
DB search
MSLEYQQEQKRVSSVMETIKEEKNRLEEETSRRKYEVIDIRKHFWEEVKVNTDTFDDYLE
TIIGLRQEAQALSVSQSSHQHATKRLSQLRRMEEIPYFGRIDFTEEGSSGQEQIYIGIST
LSDTSGENFLIYDWRAPVSSVYYDYQPGPAKYETPDGVIEGNLEKKWQYLIRRGELQSMF
DTSLTIGDEILQQVLGKGTDKQMHSIVATIQQEQNRIIRQDQGRPLIVHGAAGSGKTSAA
MQRIAYLLYKYRGHLNADQIILFSPNSMFSSYVSNVLPELGEDNMQQVTFQEYLMYRLDK
DFQVENPYEQLEYALTAANTPSYSSRVQSMQFKASIHFFKAIQSYRQSLELSGMVFKNIT
FRGEPLVTAQQLTEQFYRYDTSLRFPNRLEKLKDWLLKKIKEVQKEERAKPWVQEEIELL
SNEDYHKAHAFLAEKRGYQREAIADYEMEPKALAQLIVYQKLKPLRKRISAYQFIDFKGI
YKQLFTDPLHINNWLEVDAPDKWASICQETLNMLDENKLFYEDATPFLLLKELIQGFQIN
SSIKHIVVDEAQDYSPFQFEFLKRLFPATKMTVLGDFNQAIFTHASEHVNFDTLTNLYGS
EKTELINISRSYRSTKPIIEFTRSLVPNGAQIIPFERDGERPALKKVTDYTELHDSIAEK
VRALRQADYHSIAIICKSAEESYRAYESLASIDGIKLLKTTSSEYEQGVVVVPSYLSKGI
EFDAVIIYDASEHIYNDESLRRIFYTACTRAMHDLQLYSVGEPSKFMRDALRDGLVETC
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggagtatcagcaggaacaaaagcgagtcagcagtgtaatggagacgataaaa
gaggaaaagaatcgattagaagaagaaacctccaggcgtaaatacgaggtgatcgatatc
cgcaaacacttttgggaggaagttaaggtaaatacagatacatttgacgattaccttgag
acgatcattggtctgaggcaagaagcgcaagccctttccgtcagtcaaagcagccatcaa
cacgcaaccaagcgtttgtcacagctacgtcgcatggaggagattccttactttggccgc
atcgattttaccgaagaaggcagctctggccaggagcaaatctatattggcatctccaca
ctaagtgatacgagtggtgaaaattttcttatctacgattggcgtgcgcctgtctcgagt
gtttattacgattatcagcctggtccggctaagtatgaaactcctgatggtgtaatagaa
ggcaacttggagaaaaagtggcaatatctaatccgtcgtggtgagcttcaatcgatgttc
gatacgagtcttactattggagatgagattttacagcaggttctgggcaaaggcacagat
aaacaaatgcacagtattgtagcgacgatccagcaggaacaaaaccgtatcatccgacaa
gatcagggtagacctttaattgttcatggtgcggcaggaagtggtaagacgtctgccgcc
atgcagcgaatcgcttacctgctctataagtaccgagggcatctgaacgcggatcaaatt
attctcttttcaccgaattcgatgtttagcagttatgtgtccaatgtcttgccagagctt
ggcgaggataatatgcagcaggttacttttcaggaatatttgatgtatcggcttgataaa
gattttcaagtcgaaaatccttatgagcaactggaatatgcgttaacggcagcgaacacc
ccgtcatactcttcaagagttcagagtatgcaatttaaggcatctattcatttttttaag
gcaattcaatcttaccgccagtcactggaattatcaggtatggtatttaaaaatattacc
ttcagaggagaaccgcttgttaccgcacagcaattaactgaacagttctaccgttacgat
acttctcttcgttttccgaataggttggagaaattgaaggattggctgctgaagaaaatc
aaggaagtccaaaaggaagaacgtgcgaagccgtgggtacaagaggaaatagagctgttg
agtaatgaagattatcataaagcacatgcttttttagcggaaaaaagaggctatcaaaga
gaagcaattgccgactatgagatggaaccaaaagcacttgcgcaattgattgtttaccaa
aagttaaagccgttacgaaagcgaatcagcgcttatcagttcatagactttaagggaata
tacaaacaactttttacagatccgctgcacattaataattggcttgaggtagatgcgcca
gataagtgggcttcgatttgccaggaaacacttaacatgctcgatgagaataaattgttt
tatgaagacgcgacgccgtttctgttattgaaagagctgattcagggctttcagattaac
agttcgattaaacacatcgttgtcgatgaagcacaggattattcgccattccaatttgag
ttcttaaagcgtttgttcccggcgactaaaatgacagtactaggtgattttaatcaggcg
attttcacacatgcaagtgagcacgttaattttgatacacttaccaatctttatgggtct
gaaaaaactgagttaattaatatcagccgcagctaccgttccaccaaaccgattatcgaa
tttacccgaagtttagttcctaatggagcacagattatccctttcgaacgcgacggtgaa
cgtcctgctttgaaaaaagtaacggattacacagagctgcatgactcgattgccgagaaa
gtcagagcattgcggcaggctgattatcacagtattgcgatcatctgcaaatccgctgag
gaaagttatcgtgcctatgaatctctagcaagcattgatgggataaaactgttgaagaca
acctcttcggaatatgaacagggagtggtggttgtgccatcctatctctccaaagggatt
gagtttgatgccgtgatcatttatgatgcttcggagcatatatataatgacgaaagcttg
cgcagaattttctatactgcctgtacgagagcgatgcatgatttgcagttgtatagtgta
ggggagccgagcaagtttatgcgagatgcgttgcgggatggtctcgtcgaaacctgttaa
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