Gracilibacillus caseinilyticus: MUN88_12375
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Entry
MUN88_12375 CDS
T09432
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gcs
Gracilibacillus caseinilyticus
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_12375 (addB)
Enzymes [BR:
gcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUN88_12375 (addB)
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MUN88_12375 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Phosphodiest
Motif
Other DBs
NCBI-ProteinID:
UOQ50585
LinkDB
All DBs
Position
2629296..2632769
Genome browser
AA seq
1157 aa
AA seq
DB search
MLLRFLMGSATVNKSEQCLQEIRQELRQDPQGPSIIYLVPDQMTFQQEYALLNGDDINGS
IRAQVYSFSRLAWRVMQLTGGATKKYITSTGMQMMLRKIVEERTDDWKVFQKAIEKQGFI
EQLEEMITEFKRYCVTPDLITAQLDEMDRFQHKTVGEVALHHKLDDLLYIYQSLQHALAG
HYMDSEDQLQQLVEKLEDTNFLENTTVYIDGFHQFTPQELLVIEVMIKKAKNVTVTLTLE
ELNNEVTPLDLFYQTKETYYQLQQLAEQASVPVEIEYADQNAETKDAFIHLDHHFDSRPV
QPFSGEAPIRIAEAVHPRAEVEGTAQEIVRLVRDQGYRYRDLAILIREPDVYHDLITTVF
QDYQIPIFVDEKRTMLNHPLIETVRSLLDVVEGNWRYDAVFRLLKAGFIPQGEGEFRLDQ
EAIDELENYVLEYGVRGRSRWLSDKDWIFQRFRGFDQSTQTDRELVAQKRINHYRDKIAE
SLTNIDTKLRTLPTIRQKTIALFEWLESIGAPAQLEQMREDFDAQGRVEKGREQDQVWDA
VIQLLEEITEVAGEEEMSLSTFRNVLESGFDALRFSHVPPSIDHVVVGSIDRSRMHGIKT
AFLLGVNEGTWPMKPGSDGLITEEERSVLQTHGLKLAEGSKRQLLDDWFYVYLAFSLPAD
YLWISYPISNEEGNQKAASSLIKRMEELFPHQQSRLFLQDPEEMTEANRFVTTPNKTRGA
LTAQLARKLRGYPIESIWESVLNWFIEHSVKQQIHQQVLKSLFYQNKPVDLEKDTVQALY
EKEINASVSRLEMYHRCSYQHFARYSLGLEDRPTYKLDAPDIGQLFHEALKQITEWIQKE
GRQFADVYDQDARKYANRAVGELANVLQHQILHSSNRYQYIQKKLESVIARATFILSEQA
RKTHFAPVGLEVGFGYPDQLQSLTVPLPNDHTLLLRGRIDRVDQAFENEQLYLRIIDYKS
SAKGLNLTEVYYGLALQMLAYLDVVLQNAEGWLGHPASPAGVLYFHVHNPMISADDFLSE
DKLEQEIFKKFKMKGLMVDQEEVVRMMDTTLDYGRSNIIPAGFSKTGSFYKGSQVAEQNV
FNELQGYIHRLMENAGLAITEGKVDLNPFQQQQLTACTFCDFRSVCQFDPTLAENNYRKL
KEMKDEEVIEAIKRGEA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
ctgttgttgcgatttttaatgggtagtgcgacagtgaataaaagcgagcaatgtttacaa
gaaatcagacaagaactcaggcaagatccccaaggtccttccattatctatttagttcca
gatcaaatgacattccagcaagaatatgcgcttttaaatggtgacgacataaatggttcg
attcgtgcgcaggtgtacagcttttcacggttggcttggcgtgtaatgcagctgacaggt
ggggcaaccaagaaatatattacgtccaccgggatgcaaatgatgctgagaaagattgtc
gaggagcggacagacgattggaaagtctttcaaaaagcaatcgaaaagcaaggttttatc
gaacagttagaggaaatgatcactgaatttaaacgatattgtgtgacaccggatcttatt
acggcacaattagatgaaatggatcgtttccagcataaaactgtcggagaagtggcatta
catcataaattagatgacttattatacatttatcaaagcctgcagcatgcattggcaggg
cattatatggatagtgaggatcagctgcagcagttagtagaaaaactcgaagacacgaat
tttcttgagaatacgactgtttatattgacggttttcatcagtttacaccacaagaatta
ctagtcattgaggtaatgatcaaaaaagccaaaaatgtgacggttacgttaacgttagag
gaactgaacaatgaagtgacgccgttagacttattttaccaaacaaaagaaacctattat
cagttacaacaactggcagaacaagcatcagtcccggtggagatagaatatgcagatcag
aatgcggagactaaagatgcctttattcatttggatcatcattttgacagccggcctgta
cagcctttttctggtgaagcgccgattcggattgcggaagcagtacatccgcgtgcagag
gtggaggggactgctcaggaaatagtacggttagtgagagatcagggctatcgttatcgt
gacttggctattttaatacgcgaaccggatgtgtaccatgatttaattacaaccgttttt
caagattatcaaataccgattttcgttgacgagaagcgtacgatgctgaaccaccctctc
attgagaccgttcgctcgttattagatgttgtggaagggaattggcgttacgatgccgtt
tttcgtctgttaaaagctggttttattccgcaaggcgagggagaattccggctggatcag
gaagctattgatgagttggaaaattatgtgctggaatatggtgtcaggggcagaagcaga
tggttatcagataaagactggatttttcagcgattcagagggtttgatcaatctacccag
acggatcgggaattagtggcgcaaaaacgcatcaatcattatcgggataaaattgccgag
tcattgacgaacattgacacaaagctacggacattaccaacgatccgtcaaaaaacaatt
gcattattcgaatggcttgaatcgatcggtgcccctgcgcaattagaacaaatgcgggaa
gatttcgatgcacaaggacgggtggagaaaggccgtgagcaggaccaggtctgggatgcg
gtcattcagttgctggaagaaataacggaagtagcgggcgaggaggaaatgtcgctttcc
accttccgaaatgtattagaatccgggttcgatgccctgcgtttttcacatgtgcctcca
agtattgatcacgttgtggttggttcaattgacagatcgagaatgcacggtattaagaca
gctttcttgttaggtgtcaatgaagggacctggccaatgaaaccaggtagcgatggactg
attacagaggaagagcgatctgtgttacaaacacatggtttaaagctggcggaaggtagt
aaacgtcagttgttggatgattggttctacgtctatttagccttttccttgccagcggat
tatttatggatcagttatccaatcagtaatgaagagggcaaccaaaaggctgcttcctca
ttgataaagagaatggaagagttatttcctcatcaacagagtcgattatttttgcaagat
ccggaggaaatgacggaagcaaatcgatttgtcacgacaccgaacaaaacacgaggtgcg
ttgacagcacaattggcaagaaagctgagaggttacccgattgaatcaatttgggaatct
gtgttgaattggtttattgagcattcggtcaagcaacagattcatcagcaagtattaaag
agtttgttttatcaaaataaaccggtggatttggaaaaggatacggttcaagcattatat
gagaaagaaatcaatgcaagtgtatcaaggttggaaatgtatcatcgttgttcctatcag
cattttgccaggtacagcttaggattggaagatcgtccaacctacaagctggatgcacct
gatattgggcaattattccatgaagcattaaaacaaattaccgaatggatccagaaagaa
ggcaggcaatttgcagatgtttatgatcaggatgccaggaaatatgcaaatcgtgcggta
ggtgagctggcgaatgtgctgcagcatcagatactgcacagttccaatcgttatcaatat
atccaaaagaaattagagagtgtcatcgcaagagcaacctttatattaagtgaacaagcg
cggaagacacacttcgccccggtaggcttagaagttgggtttggttatccggatcaactg
cagtcattaacggtaccgttaccgaacgatcacacgttattgttgcgtggacgcattgac
cgagtcgatcaagcgtttgaaaatgaacaattatatttgcgaattattgactataaatcc
agtgcaaaagggttaaatctaacggaagtgtattatggacttgcactgcagatgctagct
tatttagatgtcgtattacaaaatgcagaaggctggcttggacacccggcctcaccagca
ggggtgctttatttccacgtccataatccgatgatttcagcagacgactttttatcagaa
gacaaactcgaacaagaaatcttcaaaaaattcaaaatgaaaggtctgatggtcgatcag
gaagaggttgtccggatgatggataccacattagattacggccgaagtaatattattcct
gctggcttcagtaaaacagggtccttttataaaggttcacaagtagcggagcaaaatgtc
tttaacgaactgcaaggctatattcaccgattaatggagaatgccggacttgcgattaca
gaaggtaaagtggatcttaatccatttcaacagcagcaattaacagcctgtacattctgt
gatttccgttctgtctgtcaatttgatccgacacttgcggaaaataattatcgtaaatta
aaagaaatgaaagacgaagaagtaatcgaagcaatcaagcggggtgaagcatag
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