Gracilibacillus caseinilyticus: MUN88_13865
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Entry
MUN88_13865 CDS
T09432
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs03030
DNA replication
gcs03430
Mismatch repair
gcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN88_13865 (dnaE)
03430 Mismatch repair
MUN88_13865 (dnaE)
03440 Homologous recombination
MUN88_13865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcs03032
]
MUN88_13865 (dnaE)
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_13865 (dnaE)
Enzymes [BR:
gcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUN88_13865 (dnaE)
DNA replication proteins [BR:
gcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUN88_13865 (dnaE)
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUN88_13865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
DUF655
tRNA_anti_2
DUF5100
Motif
Other DBs
NCBI-ProteinID:
UOQ47159
UniProt:
A0ABY4EU44
LinkDB
All DBs
Position
2952316..2955603
Genome browser
AA seq
1095 aa
AA seq
DB search
MPELTALQLKSGYSLMKSTIQIDSLVEQAKQLGYSSLAITDHQVMHGAIRFYTACKEAGI
KPIIGLSFELMVENEAVQVISLAKNYHGYQQLLQLSTAIQYGENITIERMKDFQEDLLLI
ISAEQWSIDDIEAQVNALSRLLAPMRYYLGISENMLPYREQLQGLTIEKVAMQDIRYLTK
QDAVAYSCVRAMDQGVKWNKNILDDLEGTYLPTNQELEWIYQSWPDLRSNANRVADQCAV
DLPLDQRLLPKYPVPDGEHADQFLEVLCQKKLQTIYPSVTEDIKARFHYELDVIQSMGFS
DYFLIVWDFVEYAKQQQIMVGPGRGSAAGSLIAYLLGITNVDPIKYELLFERFLNPERVT
MPDIDIDFSDERRDEVIRYVVDKYGAEYVAQIVTFGTFAARSLLRELFKVLAIEESDQAY
ILKSLPKDSGQSIAAMLKQAPELTEYIKQSDPLKNLFKIANRLEGLPRHVSTHAAGVIIS
QDALVDHAAAMPAQNEVPLTQYAMNDLAIIGLLKMDFLGLRNLSLIEKIVKQIERQHKRR
ISLDDIPSDDPATFSLLQNGHTNGVFQLESQGMQQVLRELKPTEFEDVVAVNALYRPGPM
EFIPAYVARKHGKEKVRYPHPDLEPILAKTYGVLVYQEQIMQIVNLMAGFSYGEADILRR
AVSKKDKDALINNRSKFINGCLQKGYARQIAEQIFDWIVRFSNYGFNRSHAVAYSVIAYQ
LAYLKANYPVAFFIEMLSSQMGNQDKIQVYLREAKARDIRVLPPSINESIGKFKAEKQGI
RIGLNLIKGVGYQAFQEIFEVRKKQRFKSLFDFCLRVPLQKVNRSIIESLILAGAFDELH
DNRATMLASLDEAMEQGELFKEFDDQMRFFEGDLALDFSYTETDPFPVMHQLMMEKEVIG
FFVSTHPLAEVRDKIRQIGYITIQQAIQSKQKKLKMAAVIQSLKVIRTKKGEAMAFVMLA
DESAEVDAVLFPVVFRQVNHWLEEDSFVFVEGRIEERNQKKQMIIDVIQPYQLDEKQFTS
DKIYIKVEREQTEAMTKLSEFATKYPGASTVYLYQGDANKLFKMSANYNLDNTWNVIKEL
KQFFGEGNVVIRHSS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaacagctcttcaattaaagagtggttactcgttaatgaagagtaccatc
caaattgattccctggttgagcaagctaagcagctcggctattcttcacttgctattacc
gatcatcaagtaatgcatggtgctattcgtttttatacagcatgcaaagaagcgggaatt
aaaccgatcatcggtttgtcctttgaattgatggtggagaatgaagcggtgcaagtcatt
agcttagcgaagaattatcatggttatcagcaattattgcaattaagtactgccattcaa
tacggggaaaatataacaattgagcgcatgaaagattttcaggaggatctgctgttaatt
atttctgctgaacaatggagtatagatgatatagaggctcaggtcaatgcgttatccaga
ttgctggctccgatgcgttactatttaggaatttctgagaatatgttgccgtatcgtgag
caattacaaggactgacaatcgaaaaagtggccatgcaggatattcgatatctgaccaag
caagatgctgtggcctattcctgtgtgagagcaatggatcaaggtgtgaaatggaataaa
aatatacttgatgatttagaaggtacttatctgccaacaaatcaggaattagaatggata
tatcaatcatggcctgacctgagaagcaatgcgaatcgagtggcagatcaatgtgcagtt
gatctgccgttggatcagcgattactgccgaaataccctgtaccagatggcgaacatgcg
gatcaatttttagaggtattatgtcaaaagaaattacaaactatatatccgtcagtaaca
gaagacatcaaggctcgtttccattatgagctggatgtcattcaatcaatgggttttagt
gattatttcctgattgtatgggattttgtagagtatgctaaacaacagcagataatggta
ggtccgggaaggggttctgcagctggctcgttgatcgcctatttattagggataacaaat
gtagatccgattaaatatgagttactgttcgaacgtttcttaaacccggaacgtgttacc
atgccagatatcgatattgatttctcggacgaaagaagagatgaagtgatccgctatgta
gttgacaaatacggtgccgagtatgtcgctcaaattgtcacgtttggtacttttgctgca
aggtcgctcttaagagaactttttaaagtactagcgattgaagaaagcgaccaggcttac
atattaaagtcactgccgaaagatagcggtcaatccattgcggcaatgctgaaacaagca
ccggagcttactgaatatattaagcagtcagaccctctgaagaatctttttaaaattgct
aatcggttagaaggtttacctaggcatgtatccacccatgctgcgggtgtcatcatcagt
caggatgcattggtagatcatgcggcagcaatgccagcccagaatgaagtgccgcttacg
cagtatgccatgaacgacttagcgataataggcttattaaaaatggacttcctgggctta
aggaacttatcgttaattgaaaaaattgtgaaacaaatcgaaaggcagcataagcgcaga
atttcattagatgacattccgtccgatgatccggctactttttccttattgcagaatgga
catacgaatggtgtttttcaattagaatcacaaggaatgcagcaagtactgcgggagttg
aagccaacagagtttgaagatgtggtggcggttaatgctttgtatcggccgggaccaatg
gaatttatacctgcatatgtcgcacgaaaacatgggaaggaaaaggtgcgctatccgcat
ccggatttagaaccgattctagccaaaacttatggcgtgcttgtatatcaagagcaaatt
atgcaaatcgtgaatctgatggcaggtttttcatatggagaggcagacattttgcgaaga
gctgtcagtaagaaagataaagatgccttgatcaataatcgttccaaattcataaatggt
tgtttacagaaaggctatgctagacagattgctgaacaaatttttgattggattgtccga
ttttctaattatggttttaaccgtagccatgcggtagcatacagtgtgattgcttatcag
ttagcatatctgaaggcaaattatccggttgccttttttattgaaatgttaagctcgcaa
atgggtaatcaagacaaaatccaagtctatttacgagaggcaaaagcccgtgacatccga
gtactgccaccttcgattaatgaaagcattggtaaatttaaagcggagaagcaagggatt
cgaattggattgaatttgattaaaggagtcggttatcaggcgtttcaggaaatatttgag
gtcagaaaaaaacagcgatttaaaagtttattcgatttttgtctgcgagtgccacttcag
aaagtgaaccgctccattattgaatcacttattctggctggagcatttgatgaactgcat
gataatcgtgcaactatgttagccagcctggatgaggcgatggaacaaggggaactcttt
aaagaattcgatgaccaaatgcgtttcttcgaaggtgatcttgcccttgatttctcttac
acagagacagatccatttcctgtcatgcatcaattaatgatggaaaaagaagtgattggc
ttctttgtttccacacatccattagcagaagtacgagataagattcgccaaatcggttat
attacgatccagcaggctattcaatctaagcagaaaaaactgaaaatggccgcagttata
caatcactcaaggtgatccgtacaaaaaaaggtgaggcgatggcttttgtgatgctcgcg
gatgaatcagctgaagttgatgcggttctgttccctgttgtttttcgacaagtaaatcat
tggctcgaagaagacagctttgtatttgtggaaggacgaatcgaagagcgtaaccagaag
aagcaaatgattatcgatgtcatacaaccttaccaacttgatgagaaacaatttactagt
gataaaatatatattaaagtagaacgagagcaaacagaggcgatgacaaagctcagtgag
ttcgcaaccaagtatccaggagcttccactgtctatctctatcaaggagatgctaacaaa
ctgtttaaaatgtctgcgaattataatttggacaatacttggaatgtgatcaaagagtta
aagcaattctttggagaaggcaatgtagtcatcaggcattcttcttag
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