Gracilibacillus caseinilyticus: MUN88_14880
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Entry
MUN88_14880 CDS
T09432
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MUN88_14880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_14880
Enzymes [BR:
gcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MUN88_14880
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MUN88_14880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
nSTAND3
AAA_14
HHH_5
AAA
AAA_22
AAA_12
NPHP3_N
TsaE
SLFN-g3_helicase
RsgA_GTPase
Zeta_toxin
RecR_HhH
AAA_28
UvrD-helicase
DEAD
NTPase_1
AAA_18
HHH
AAA_16
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UOQ47343
LinkDB
All DBs
Position
3158694..3161060
Genome browser
AA seq
788 aa
AA seq
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MENEPEVEEKNFIKGEMIHTIFENKQEHFSIAKIKVLETNQTFDENEVVVKGYFRRLDPG
ETYEFYGRVVDHKRFGRQFQVESYQRFLPQSKEGIVAYLSSDLFPGVGKKTAERIVDTLG
DTALSMILNDQKVLNKVRGITDEKQKKIYQILQENQGFEGIVVELSKYGFGLKMAQKMYT
AFKEETLDTLKSNPYQFVFQVESFGFLRADQIARQNEISIDHPTRLQAACVYILQNSVQD
GHAYLPLDRLLYEMDQLLDGEANAIDVDKMTAQIVELNKEKEIIVSDQNAYMPSLYYSET
GFCAQVKRIADKKQERTFTDAELLKIVGGIEEEETLSYGKEQYQALETALSEKIFILTGG
PGTGKTTVIKGIINAYADIHDLSLDKDDYRDDEDFPFVLTAPTGRAAKRMKESTGIDSVT
IHRLLGWDGQESFDKDENNQLTGKIIVIDEFSMVDIWLAYQLFRAIPDDMQVIIVGDEDQ
LPSVGPGQVLADLLKSSVVASISLKEVYRQKEGSKIIQLAHEIKNNQVQPTTLSKANDFN
FFSCPDYQVIEIVKQVVKKAYDKGVDQRQIQVLAPMYRSKAGILRLNEELQAILNPRQQG
RREMAFGDTVFRKGDKVIQLVNQAEDGVFNGDIGEVVAIFEKDENVDQEEQVVVSFDEKE
VAYAKADLMNLMHAYCTSIHKSQGSEFQIVIMPVISGYNRMLRKNLLYTGITRAKQSLVM
CGDKQAFLKGVHTEDTNKRYTNLVSFLHELFHVKEEKSDKDKKEISADEWLLSVDVGQED
FSPYDFMV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgaaccagaagtagaagaaaaaaatttcatcaaaggcgagatgattcatacg
atctttgaaaataaacaagagcatttctccattgcaaagattaaggttctcgaaacaaat
cagaccttcgatgagaatgaggtcgtggtaaaaggctattttcgacgattagatccaggg
gagacatatgaattttatggacgagtagtggaccataaacggtttggacgtcaatttcag
gtagagagttatcaacgttttttaccacaatcaaaagaaggtattgtggcatacctatca
agtgatctttttccaggtgtcggaaagaaaactgcagaaagaatcgtagacacgctagga
gacacagcactttctatgattttgaatgatcagaaggttcttaacaaagtaagaggtata
acagacgaaaaacaaaagaaaatttatcagattttgcaagaaaatcaggggtttgaaggt
attgttgttgaactttcgaaatatggtttcggtctgaaaatggcgcaaaaaatgtatacc
gcttttaaagaggaaacattggatacattaaaatcgaacccgtatcaatttgtgtttcaa
gttgaaagttttggttttcttagagctgaccagatcgccaggcaaaatgagatttctatt
gatcatccgacaagattacaagcagcttgtgtctatatattgcagaatagtgtgcaagat
ggacatgcctatttgccgctggatcgtttgctgtatgaaatggatcagctattagatggg
gaagcgaatgccatcgatgttgacaagatgactgcccagatcgtcgaactcaacaaagaa
aaagaaattatcgtgtctgaccaaaatgcttatatgccatccctatactattctgagacc
ggattttgtgcacaagtaaaacggattgcagacaaaaagcaggaaaggacatttactgac
gcagaactgttaaaaatagttggaggaattgaagaggaagaaacattaagctatggaaaa
gaacaatatcaagcgttggaaacggcattatctgaaaagatttttattctgacaggtggt
cctggaacagggaagacgaccgtgataaaagggatcataaatgcgtatgcagatattcat
gacttgtccttagataaggatgattatagggatgacgaagattttccatttgtcctcaca
gcaccgactggcagagcagcaaaaagaatgaaagagtcaacaggaattgatagtgtaaca
atccaccgattgttaggttgggatggtcaagaatccttcgataaagatgaaaataatcaa
ctcacggggaaaattattgttattgacgaattttctatggtagatatttggcttgcttat
cagctatttcgtgccattcctgatgacatgcaggtcattatcgtaggggatgaggatcag
ttgccatcggtcggacctggccaagttcttgctgatttgttaaaaagcagtgtggtagct
tccatcagtttaaaagaagtttaccgtcaaaaagaaggctccaaaattattcaattagcc
catgaaattaagaataatcaagtacagccaacaacattatcaaaggcaaatgattttaac
tttttttcctgtcctgattatcaggtcattgagatcgtgaagcaagtagtaaaaaaagcg
tacgataaaggtgttgaccagcgacaaatacaagttcttgccccaatgtaccgttcaaaa
gcaggcattctccgattaaatgaagaattgcaagcaatcctaaaccctcgtcaacagggg
agaagagaaatggctttcggggataccgttttccgaaagggagacaaagtcattcaatta
gtgaaccaagcagaagacggtgtgtttaacggcgatataggtgaagttgtcgccattttt
gaaaaagatgaaaatgtggatcaagaagagcaagtagttgtcagctttgatgaaaaagaa
gttgcttatgcaaaagcggatttaatgaatttgatgcatgcttactgcacctcgattcat
aaatcccaaggcagtgaattccaaattgtcattatgccagtaatttcaggatataatcgg
atgcttcggaagaatctactttatacgggtataacccgcgcaaagcagtctctggttatg
tgtggggataagcaagcttttttaaaaggggttcacacagaagacaccaacaagcgttat
acaaacctcgtgtcatttttgcatgaactttttcatgtaaaggaggagaaaagtgacaaa
gataagaaagagatatcagcagatgaatggttactttcagtagatgttggacaggaagat
ttctcaccttatgattttatggtataa
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