Gracilibacillus caseinilyticus: MUN88_15135
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Entry
MUN88_15135 CDS
T09432
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs03030
DNA replication
gcs03430
Mismatch repair
gcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN88_15135 (holA)
03430 Mismatch repair
MUN88_15135 (holA)
03440 Homologous recombination
MUN88_15135 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcs03032
]
MUN88_15135 (holA)
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_15135 (holA)
Enzymes [BR:
gcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUN88_15135 (holA)
DNA replication proteins [BR:
gcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUN88_15135 (holA)
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUN88_15135 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Pox_L5
DNA_pol3_gamma3
DNA_pol3_delt_C
HTH_37
HTH_19
PriCT_1
Motif
Other DBs
NCBI-ProteinID:
UOQ47394
UniProt:
A0ABY4ESI9
LinkDB
All DBs
Position
3206225..3207262
Genome browser
AA seq
345 aa
AA seq
DB search
MSYISCIEEMKKQKFAPVYYFYGTETYMIEALKQALISNGLEKEEKDTNFEVYDLEETSI
QEVITDAETFPFFGERKIILATNASFLKAKPPKMEVDHRPDVLIEYLENPAPYSIVVLIA
PYEKVDERKKVVKRLKKETKAVSCEPLKERELQKVITSIANQHNVKLSEQVITYFINEIG
TNMMIIHSEMEKLALYVGEGNEIRLEDAKLLLSSQESSSSFKLMDAIMNNDLAKAIDITK
DLEKMNEEPIALIALIASQYRTLMHVKILKQKGYTQQQMASQLKVHPYVAKLSMQRQAKF
QLKELKRAIDLLTETDAQIKSGRMDKSLAFELLLYQLIATRQRVS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagttacataagttgtatagaagaaatgaaaaaacagaaatttgctcctgtttattat
ttttacggaacagagacatatatgattgaggccttaaaacaagctttaatatccaatggc
ttagaaaaagaagagaaggataccaatttcgaggtatatgatttagaagagacatcgatt
caggaagtgatcacagatgcagaaacatttcctttttttggtgaaagaaaaattattttg
gctacgaatgcgtcatttttaaaggcaaaacctcccaaaatggaagttgatcaccggccg
gatgtattgattgagtatttggaaaatccagcaccgtattcgatcgttgtattaattgca
ccatacgagaaagtcgatgaacgtaaaaaagttgtcaagcgattaaaaaaagagacaaaa
gccgtttcttgtgaacccctaaaagaacgggagttacagaaagtgattacttcgattgcg
aatcagcataatgtgaagctttctgagcaagtgataacttattttataaatgaaattggg
acaaacatgatgattatccattccgaaatggaaaaactcgctttatatgtcggcgaaggg
aacgaaataaggctagaagacgccaagttgttgttgtccagtcaagagagtagttcgtct
tttaaattaatggacgccatcatgaataatgatctagcaaaagcgattgatattacaaag
gatttagaaaaaatgaatgaggaacccattgcgttaatcgcccttatagcatctcaatac
aggacactgatgcatgtaaaaatattaaagcaaaaggggtatacgcagcaacaaatggca
tcgcaacttaaggtacatccgtatgtggctaagctatcgatgcaaagacaagcaaagttt
caattaaaagaacttaaacgtgcgatcgatcttctcactgaaacggatgcccaaataaaa
tcaggcaggatggataaatcgttagcattcgaactattgctttaccaattaattgcaaca
agacaacgtgtatcataa
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