Gracilibacillus caseinilyticus: MUN88_16435
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Entry
MUN88_16435 CDS
T09432
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gcs
Gracilibacillus caseinilyticus
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_16435
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MUN88_16435
Archaeal homologous recombinant proteins
MUN88_16435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
DNA_pol_E_B
DUF2390
Motif
Other DBs
NCBI-ProteinID:
UOQ47629
LinkDB
All DBs
Position
3441293..3442450
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AA seq
385 aa
AA seq
DB search
MKIIHTADWHLGKIVHGLHMTEDQGEVLRELLTILEKEKPDLLIIAGDLYDRAVPPREAV
DILNAFLTKASVELEIPIVAISGNHDSPDRLGFGASLFRSKQLYVATTIEDIFHPVHLQD
SDGDVYIHMVPYVEPEQVKAYFQDATIQTHQAAMECIIAQLREKMTEHPDARHLLVGHAF
IAGGMESESEERLTMIGGTPYIDASLFDAFDYVALGHLHQPQKIKSEYIRYSGSLMKYSF
SEANHRKSVTLLELTNEDKQLSTIPLNAPRNLRVLEGYFQDLLDGKIAEPTEDYLQIRLL
DDGQIMDPVTKLRKLYPNILRLERKNPYVHQSLRELQSIKEKQEMSHEQLFAAFYKEIKK
TELSEERETYIKRVIHQVMTDERRK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattattcatacagcagattggcatttaggcaaaatcgttcatggtttacatatg
acagaggaccagggagaggtgttaagagagcttctcactattttggagaaagaaaagcct
gatcttctgattatagcaggtgacttatacgatcgtgctgtacctccgcgcgaagcagta
gatatattaaatgcattcttaacgaaggcatccgttgaattagagataccgattgtagcg
atctcaggaaatcatgacagtccagaccgtcttggttttggtgcgagcttgtttcgttcc
aagcaattatatgtagcaaccacgatagaagatatttttcaccctgttcatttacaggac
tctgatggtgatgtgtatattcatatggtcccatatgtcgaaccagagcaagtgaaagca
tatttccaggatgccaccattcaaacgcatcaagctgctatggaatgtattattgcccaa
ttgagagaaaagatgacagagcacccggacgcacgtcatctactagttggccatgcattt
atcgcaggagggatggagtcagaatcagaagaaagactgaccatgattggagggactccc
tatatcgacgcaagcctgtttgatgcattcgattacgtagcattagggcacttacaccag
ccacaaaaaatcaaaagcgagtatatccgttacagtggctctctaatgaaatattctttt
tctgaagccaatcaccgtaaatccgttaccttgcttgaactcacaaatgaggacaagcaa
ttatcgaccataccactaaacgcgccaagaaatttacgtgtgctcgaaggctattttcaa
gatctgttagatggaaaaattgcagaaccaacagaagattatttacagatacgcttgctg
gatgacggacaaatcatggatccagtcactaagctccgcaaactctatccgaatattctt
cgactagaacgaaaaaacccatacgtacatcaatcgttacgagagctgcaatccattaaa
gagaagcaagaaatgtcgcatgagcaattatttgctgccttttataaagaaatcaaaaaa
acagaactgtctgaagaacgagaaacgtatataaaaagagttattcatcaagtcatgacg
gacgaaaggaggaaataa
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