Gracilibacillus caseinilyticus: MUN88_17560
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Entry
MUN88_17560 CDS
T09432
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs03030
DNA replication
gcs03430
Mismatch repair
gcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN88_17560
03430 Mismatch repair
MUN88_17560
03440 Homologous recombination
MUN88_17560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcs03032
]
MUN88_17560
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_17560
Enzymes [BR:
gcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUN88_17560
DNA replication proteins [BR:
gcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUN88_17560
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUN88_17560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
DNA_pol3_a_NII
tRNA_anti-codon
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UOQ47839
LinkDB
All DBs
Position
complement(3660923..3665209)
Genome browser
AA seq
1428 aa
AA seq
DB search
MSISNHEKFRLLMDQIGIADDMKNKYFQEGSIEKLEVFRSDQRWHFHFQLAQSVPADIYQ
LFILKLTEAFSSIAKVTWSIQVQQDQLSEKERFDYWQIFLSELVNESPKYRAIENKKPLF
NDNNIMLTVSNQIEAQWGKNIQGHLDQFCTKAGLAKQFIKMEVADQQEELEKFQQEKAME
DRKKVEEAFKQQEKRAQESKQETDTGPVQLGYPIKEQPVPMRDIFEEEKSIVFQGYLFDA
DIRELRSGRHLLILKVTDYTDSFQIKMFSKGDQDVEKFKQLKEGLWIKAKGMIQTDNFTN
ELTMMAKDIQQAPTITRDDPGLNGEKRLELHAHTLMSQMDAVVSASKLVEQAGKWGHKAI
AITDHAVAQAYPEAYAAGQKHGVKIVYGVEANIVDDGVPIAYNEADRDLAEDTYVVFDVE
TTGLSAIYDTVIELAAVKIKNGEIVDRYESFANPHHPLSETTTNLTGITDDMVKDAPEVE
DVLKEFHTWMGDAILVAHNADFDMGFLNTGFKRIGYDEASNPVIDTLELARLLFPELKNH
RLNTLCKKLDIELTQHHRAIYDAEATGYLLWKFVKLSIERGITNHNQYNQHMGEGNAYQR
SRPFHATLLAVTQEGLKNIYKLVSMAHINYFYRVPRIPRSKLQQYREGILVGTACDQGEV
FETMMQKSKEQAEKAAKFYDYIEVQPPANFVHLYDKELVQNEAQLYDIIRNIVQLANDLN
KPCVATGNVHHINENDRIYRQILIASQSGNPLSRQTLPNAYFRTTKEMMDAFSFLGDEKA
KEIVIDNPNALVDQLEDIKPVKEDLYTPNIDGAEQEIRDLSYNFARSVYGDELPEIVEKR
IEKELKSIIGHGFAVIYLISQKLVKKSLDDGYLVGSRGSVGSSLIATFTEITEVNPLPPH
YVCPECKESQFFDDGSVGSGFDLPDKNCSNCDVPLKKDGQDIPFETFLGFKGDKVPDIDL
NFSGEYQPRAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYASDKEMTLKQAEVDRL
VKGCTGAKRTTGQHPGGIIVVPDDKEIYDFTPIQFPADDRNSEWRTTHFDFHSIHDNLLK
LDILGHDDPTVIRMLQDLSGIDPQTVPTDDEEVMKIFSGPEVLGVTSEQIMCKTGTLGVP
EFGTRFVRQMLEDTKPKTFAELVIISGLSHGTDVWLGNAQELINNGICGLPDVIGCRDDI
MVYLMHKGLDASLAFKIMEFVRKGKGLDPEWIEEMKKHDVPDWYIDSCKKIKYMFPKAHA
AAYVLMAIRIAYFKVHHPILFYAAYFTVRADDFELDTMIKGSEAIRKRVKEILEKGNDAP
PKEKSLLTVLELALEMNERGYHFQKVDLYRSSATEFLVEDNSLIPPFNAVDGLGTNAAIN
IEKAREDGEFLSKEDLRERSRISKTVLEYLDQHGCLEGMADKNQLSLF
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctctaatcatgagaaattccgacttttaatggatcaaattggaatagcggac
gacatgaaaaataagtattttcaagaaggaagtatcgaaaaactagaagtatttcgttct
gatcagcgctggcattttcactttcagcttgcccaatcggttcctgctgatatttatcag
ttgtttatattgaaactaacggaagcattttcttccattgcaaaggttacctggtcgata
caagtgcagcaagatcagctcagcgagaaagaacgctttgattattggcaaatcttttta
tcagaattggtgaatgaatccccaaaataccgtgcaattgaaaataaaaagccattattt
aacgataataatattatgttaactgtaagtaaccagattgaagcacaatgggggaaaaac
atccagggacatcttgatcaattttgtacaaaagctggacttgccaagcaatttatcaaa
atggaagtagctgaccagcaggaggaattagagaaattccaacaggaaaaagcgatggaa
gatcgtaaaaaggtcgaagaagcctttaaacaacaagaaaaacgcgcgcaggaatcaaaa
caggagactgatacgggccctgttcaactcggctatccgattaaagaacaacctgtacca
atgagagatatttttgaagaagagaaaagtattgtctttcaaggctatctatttgatgcc
gacatccgtgaattacgatccggcaggcatttgcttatcttgaaggtgacagattacacg
gattccttccagattaaaatgttttccaaaggtgatcaggatgttgagaaatttaaacaa
ttaaaagaaggactttggattaaggcaaaaggtatgattcagaccgataatttcactaat
gaattaacgatgatggcaaaggacattcaacaagctcctacgatcacaagagacgatcct
ggtttgaacggggagaaacgtttagaactccatgcgcacacattaatgagtcagatggat
gcagtggtgtcagcctccaaattagtcgagcaagctggtaaatggggacataaagctatt
gccattacggatcacgctgtcgcacaagcttatcctgaggcatatgcagcaggacaaaag
catggagtaaaaatcgtctacggtgtcgaagcgaatattgtcgatgacggtgtgccgatt
gcctataatgaagcagatcgtgatttggcagaggatacgtatgttgtatttgacgtggaa
acaactggtttatcagctatatacgataccgttattgaacttgcagcagtgaaaataaaa
aacggagagattgtggaccgttatgaatcgtttgccaatcctcatcatccgctgtccgaa
acgacaacgaatttaacgggtataaccgatgatatggtcaaggatgctccagaagtggaa
gatgtattgaaggaattccatacttggatgggcgatgcgattctggttgctcataatgca
gacttcgatatgggctttttaaatactggatttaagcggattggatatgatgaggcaagt
aatcctgtaattgatacattagaattagctagattacttttccctgaattgaaaaatcac
cgtctgaatacactttgtaaaaagcttgatattgaattaacccagcatcaccgggcgatt
tacgatgcagaagcaacaggttatttgttgtggaaatttgtgaaactatcaatagaacgt
ggaattaccaatcacaatcaatataatcagcatatgggggaaggtaatgcgtatcaacgt
tcgagacctttccatgcgacgttgcttgccgtgacccaggaaggcttgaaaaatatttat
aagctggtatcgatggcacatatcaattatttttatcgtgtaccaagaattccaaggtcc
aagctacagcagtatcgagaaggcatattagttggaactgcttgtgatcaaggggaagtc
tttgaaacgatgatgcaaaaatcaaaggaacaggctgagaaagcagcgaaattttatgat
tatattgaggttcagccgccagccaattttgttcatttatatgacaaagaattagtgcag
aatgaagcacagttatacgatattatccgaaatatagttcaattagctaatgatcttaat
aaaccatgcgtggcgacaggaaatgttcatcacattaacgaaaatgatcgaatataccgt
caaatactgattgcctcacaaagtggtaatccgttaagtaggcaaacactgccaaacgca
tatttccggacaacaaaagaaatgatggatgctttttcctttttaggtgatgagaaagcg
aaagaaattgtgattgataatcctaatgcgctcgtagatcaattggaagacattaaacct
gtcaaagaagacttatatacaccaaacattgatggtgcggaacaagaaattagagattta
agttataattttgcccgctcagtctatggtgatgaattaccagaaattgttgaaaaacgg
atagaaaaagaactgaaaagtattattgggcatgggtttgcggtcatttatttaatttca
cagaagctggtgaagaagtcactcgatgatggttatttagttggttcacggggatccgta
ggttcatcattaattgcgactttcaccgagattacagaagtaaatccgttaccgcctcac
tacgtctgtccggaatgtaaagagagtcagttcttcgatgatggctctgtggggagcggc
ttcgatttacctgataaaaattgttccaattgtgacgtaccattaaagaaagatggtcag
gatattccttttgagacgttcttaggtttcaaaggggataaagtacccgatattgatttg
aacttctctggtgaatatcagccgcgtgcgcataactatacgaaagtcttattcggtgaa
gataacgtatatcgtgccggaacaataggtacagttgcggagaaaacagcatacggttat
gttaaagggtatgcaagtgataaggagatgaccttgaaacaagctgaggttgatcgactt
gtgaaaggttgtaccggtgcgaaaaggacgaccggccagcacccaggtggtatcattgtt
gtaccggatgacaaagaaatttatgattttacaccaatacagtttccggcagatgaccgt
aactccgaatggagaacaacacattttgatttccattctattcatgataacctattgaaa
ttagacatacttggacacgatgatccaacagttatcagaatgttacaggatttaagtgga
atagatcctcagacagttccgaccgatgatgaggaagtaatgaaaattttctccggaccg
gaagtgttaggcgtaacttcagaacaaattatgtgtaagactggtactttgggggtaccg
gaatttggtacccgattcgttcgccagatgctggaggatacaaagccaaaaacgtttgct
gagcttgttattatttccggactgagtcacggtacagatgtatggttaggtaatgcacag
gaattgattaacaatggtatttgtggcttgccagatgttatcgggtgtcgtgatgatatc
atggtctacttgatgcacaaaggtctcgatgcatcccttgcttttaaaatcatggagttt
gttcgtaaagggaaaggacttgatccagagtggattgaggaaatgaaaaaacatgatgtg
ccggactggtacatcgattcctgtaaaaaaattaaatatatgttccctaaagcacacgct
gctgcgtatgtattaatggcgattcgtattgcttatttcaaggtgcatcatcctatatta
ttctatgctgcttatttcacagtaagagcggatgattttgaattagatacgatgattaaa
ggatcagaagctattcgcaaacgagtgaaagagattttagaaaaaggtaatgatgccccg
ccaaaagagaaaagtttacttacagtcttggaattggcattggaaatgaatgaaaggggc
taccattttcagaaggtagatctttaccggtcatctgcgacagaatttcttgttgaagat
aacagtttgatcccgccatttaatgcagtagatggtttagggacaaatgctgcgattaac
attgaaaaagcgcgtgaggacggtgaatttttatcaaaagaagatttacgtgagcgaagc
aggatttcaaaaacagtactggaatatttagatcaacatggctgtctagaaggaatggct
gacaagaaccagctgtctttattctaa
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integrated database retrieval system
